FFCP PHASE1:Hg19::chr5:32712459..32712504,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:32712459..32712504,+ | |||
|id=chr5:32712459..32712504,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.34e-14!180;CL:0000057!2.67e-12!75;CL:0002620!4.24e-10!23;CL:0000136!5.52e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.13e-12;13!CL:0002620;2.78e-12;23!CL:0000515;6.27e-09;3!CL:0002623;1.95e-08;3!CL:0000135;2.81e-08;3!CL:0000388;2.81e-08;3!CL:0002617;5.53e-07;2!CL:0000056;8.88e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.95e-12,76;CL:0002620,3.78e-12,23;CL:0000136,1.28e-10,15;CL:0002623,1.49e-08,3;CL:0000135,3.51e-08,3;CL:0000388,3.51e-08,3;CL:0002617,5.03e-07,2;CL:0000515,7.39e-07,4;CL:0000034,8.21e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000515;8.88e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.68e-09!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.81e-08;3!UBERON:0000043;2.81e-08;3!UBERON:0007845;2.81e-08;3!UBERON:0003688;1.27e-07;6!UBERON:0002358;1.27e-07;6!UBERON:0003684;1.27e-07;6!UBERON:0001178;1.27e-07;6!UBERON:0004457;1.33e-07;9!UBERON:0000042;1.33e-07;9!UBERON:0001905;9.71e-07;2!UBERON:0002757;9.71e-07;2!UBERON:0010134;9.71e-07;2!UBERON:0005408;9.71e-07;2!UBERON:0001899;9.71e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.45e-08,41;UBERON:0007846,3.51e-08,3;UBERON:0000043,3.51e-08,3;UBERON:0007845,3.51e-08,3;UBERON:0003688,1.27e-07,6;UBERON:0002358,1.27e-07,6;UBERON:0003684,1.27e-07,6;UBERON:0001178,1.27e-07,6;UBERON:0002199,4.09e-07,46;UBERON:0002416,4.09e-07,46;UBERON:0001905,8.36e-07,2;UBERON:0002757,8.36e-07,2;UBERON:0010134,8.36e-07,2;UBERON:0005408,8.36e-07,2;UBERON:0001899,8.36e-07,2 | |||
|phase1_expression=3.99692434395225,6.20891519283851,3.66481450649525,0,2.68176656656373,3.48935409640147,0,0,0.261185628199839,0,0,0,0,1.23766352960047,2.31978163009541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,3.50936537445123,1.15877215168659,0,0.486634870302636,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39293562831038,0.662045904066094,0.860509862246441,1.77334191099179,0,0,0.98667019366864,0,0,0,0,0.576175924479999,0,0,0,0.448346041655403,0,0,0,0.204154171254893,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,1.22595118319608,1.50238058906597,0,0.358779271377724,0.213557388818567,5.29829752898905,2.10063767259082,4.84346887420663,1.03056216018252,2.04728541964749,4.38818463827292,7.79496041289589,1.26216887122057,1.74894807420369,4.84938170456436,2.13005755509969,0.806016785821122,0.847802961552438,0,0,0,0,0,0,0,0,0,0,0,0,3.71494342425583,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,0,0,2.17171960001369,2.87666851570537,2.50685348535854,0,0,0,0,0,7.8083912314573,0,0.335032530668698,0,0,0,0,0.981531933753119,0.500170521059677,0.542530047399471,1.66376689224646,4.28229573113188,2.20783381047509,0.937131319941706,2.10662269809403,2.27407504055985,1.03473071292505,0.664225598535437,0.553107505625109,0.260650843404249,0,0,0,0,0,0,0,0,1.48864684691266,3.6830873589135,0.561320188866147,1.15325234330131,5.11707249066703,0.160853921143607,0,0,0.355123450626254,0.246381468041427,1.03850885836724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.924291702687866,0.15350367472613,0.964856007391714,0.644521469209642,0.870100163485371,0.170453254832202,0.178064071293475,0,0,0,0,0.929691098594572,2.20368642781448,1.3940745403212,0,0,2.60979897622522,0,0.143124886741991,0,1.2655176988749,0,0.255897791311334,0.42793898803392,1.59101623962968,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0,0.424216295861138,0,2.2054613741845,0,0.876901770507525,1.15755106853338,0,0,0,0,0,0,0,0,3.16661452946496,0.987884678879706,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846694330895531,0,1.40398589056729,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.678923115418936,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0.279282401272254,0.687481272035051,0,0,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0.551639951094387,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.747511887973863,2.51526888159466,0.414239055347196,0,0,0,0,1.08803560673895,2.506898940227,1.53172788381731,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,1.38348634936231,0,0,0,0,0,0,0,0,1.10961172300523,1.7046270474758,7.0439012490721,8.89811221596536,0,0.151230923763239,0.621748802331122,0,0,0,0,0.829412415681711,0.265841714557995,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,2.1160556621441,0.3062454773532,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,1.48863353516788,0,0,2.67850917939143,4.03540466662589,0,0,0,5.30076342756585,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0.913158720509496,0.215927591218621,0,0.0714765441766563,0,0,0.173858272302579,0.801711364730253,3.31545862660859,1.53646629384555,1.38251932362818,0,0,0,0.423387050190929,0,0,0,0,0,0,0,1.12929087541872,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.509781344063451,0,0.386747327841463,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0.135982980381829,0,0,1.11598505450025,2.31087814315709,1.29787968637137,0,0,0,0,0,0,0,0.606229585745915,0,0,0,0.213233981900981,0,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0,1.95945073107265,1.02669990325584,0,0,0.332660356546013,0,0,1.9307228228694,0,0,0,0,0,0.603821380773079,0 | |||
|short_description=p@chr5:32712459..32712504,+ | |||
}} |
Revision as of 04:57, 22 January 2014
Short description: | p@chr5:32712459..32712504, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:32712459..32712504, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.95e-12 | 76 |
skin fibroblast | 3.78e-12 | 23 |
fat cell | 1.28e-10 | 15 |
acinar cell of salivary gland | 1.49e-08 | 3 |
fibrocyte | 3.51e-08 | 3 |
tendon cell | 3.51e-08 | 3 |
adipocyte of breast | 5.03e-07 | 2 |
skeletal muscle myoblast | 7.39e-07 | 4 |
stem cell | 8.21e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.45e-08 | 41 |
dense regular connective tissue | 3.51e-08 | 3 |
tendon | 3.51e-08 | 3 |
regular connective tissue | 3.51e-08 | 3 |
omentum | 1.27e-07 | 6 |
peritoneum | 1.27e-07 | 6 |
abdominal cavity | 1.27e-07 | 6 |
visceral peritoneum | 1.27e-07 | 6 |
integument | 4.09e-07 | 46 |
integumental system | 4.09e-07 | 46 |
pineal body | 8.36e-07 | 2 |
regional part of epithalamus | 8.36e-07 | 2 |
secretory circumventricular organ | 8.36e-07 | 2 |
circumventricular organ | 8.36e-07 | 2 |
epithalamus | 8.36e-07 | 2 |