FFCP PHASE1:Hg19::chr5:134907261..134907265,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C607 | |||
|description=CAGE_peak_at_chr5:134907261..134907265,- | |||
|id=chr5:134907261..134907265,- | |||
|ontology_enrichment_celltype=CL:0000064!4.23e-08!3;CL:0005012!4.23e-08!3;CL:0000067!4.23e-08!3;CL:0002304!4.23e-08!3;CL:0000342!9.25e-07!1;CL:0002565!9.25e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002563;1.13e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.13e-13,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;8.81e-14;4!DOID:4362;3.26e-11;5!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.82e-14,4;DOID:4362,2.94e-11,5;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000488!1.01e-12!4;UBERON:0007023!1.05e-12!115;UBERON:0002203!1.21e-08!6;UBERON:0001768!1.21e-08!6;UBERON:0001778!4.23e-08!3;UBERON:0001775!4.23e-08!3;UBERON:0002200!5.29e-08!11;UBERON:0006876!5.29e-08!11;UBERON:0000989!4.18e-07!1;UBERON:0008811!4.18e-07!1;UBERON:0006258!4.18e-07!1;UBERON:0005876!4.18e-07!1;UBERON:0004874!4.18e-07!1;UBERON:0001736!4.43e-07!1;UBERON:0006298!4.43e-07!1;UBERON:0002171!4.69e-07!1;UBERON:0006518!4.69e-07!1;UBERON:0008949!4.69e-07!1;UBERON:0000101!4.69e-07!1;UBERON:0002167!4.69e-07!1;UBERON:0001301!8.75e-07!1;UBERON:0002506!9.25e-07!1;UBERON:0001769!9.25e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.13e-13;4!UBERON:0001262;1.13e-13;4!UBERON:0004786;1.13e-13;4!UBERON:0004808;1.13e-13;4!UBERON:0001277;1.13e-13;4!UBERON:0000002;1.44e-09;6!UBERON:0001560;1.44e-09;6!UBERON:0000485;2.18e-08;7!UBERON:0003929;2.18e-08;7!UBERON:0003350;1.69e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.13e-13,4;UBERON:0001262,1.13e-13,4;UBERON:0004786,1.13e-13,4;UBERON:0004808,1.13e-13,4;UBERON:0001277,1.13e-13,4;UBERON:0000002,1.32e-09,6;UBERON:0001560,1.32e-09,6;UBERON:0003350,1.69e-07,8;UBERON:0000485,8.37e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.548751427043128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81250867562184,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0.205116364240755,0.252071696221718,0,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,2.03302947670128,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr5:134907261..134907265,- | |||
}} |
Revision as of 07:32, 22 January 2014
Short description: | p@chr5:134907261..134907265, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:134907261..134907265, - |
Coexpression cluster: | C607_small_cervical_Keratinocyte_Sebocyte_maxillary_normal_skin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.13e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.13e-13 | 4 |
wall of intestine | 1.13e-13 | 4 |
gastrointestinal system mucosa | 1.13e-13 | 4 |
gastrointestinal system epithelium | 1.13e-13 | 4 |
intestinal epithelium | 1.13e-13 | 4 |
uterine cervix | 1.32e-09 | 6 |
neck of organ | 1.32e-09 | 6 |
epithelium of mucosa | 1.69e-07 | 8 |
simple columnar epithelium | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.82e-14 | 4 |
cervical cancer | 2.94e-11 | 5 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |