FFCP PHASE1:Hg19::chr6:5498703..5498727,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:5498703..5498727,+ | |||
|id=chr6:5498703..5498727,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.84e-28!180;CL:0000057!2.15e-27!75;CL:0002620!4.04e-24!23;CL:0000048!1.82e-14!430;CL:0000723!8.35e-14!436;CL:0000034!5.91e-13!444;CL:0002371!1.53e-11!591;CL:0000144!4.84e-10!625;CL:0000219!1.29e-09!390;CL:0002320!1.78e-09!365;CL:0002551!5.79e-09!6;CL:0000134!1.55e-08!358;CL:0000548!4.76e-08!679;CL:0000004!4.76e-08!679;CL:0000255!4.76e-08!679;CL:0000003!6.19e-08!722;CL:0000012!7.81e-08!682;CL:0002570!2.47e-07!8;CL:0000183!8.66e-07!59;CL:0002559!9.09e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.24e-29;23!CL:0002551;2.77e-25;6!CL:0002559;2.62e-22;5!CL:0000346;6.51e-14;3!CL:1000428;6.51e-14;3!CL:0002561;3.81e-10;2!CL:0000057;6.49e-10;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.18e-29,23;CL:0002551,2.27e-25,6;CL:0002559,8.54e-23,5;CL:0000346,2.10e-14,3;CL:1000428,2.10e-14,3;CL:0000057,1.32e-12,76;CL:0002561,3.83e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.25e-07!5;DOID:450!1.25e-07!5;DOID:66!1.25e-07!5;DOID:423!1.25e-07!5;DOID:0080000!1.25e-07!5;DOID:11722!1.25e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.29e-08;5!DOID:450;1.29e-08;5!DOID:66;1.29e-08;5!DOID:423;1.29e-08;5!DOID:0080000;1.29e-08;5!DOID:11722;1.29e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.20e-08,5;DOID:450,1.20e-08,5;DOID:66,1.20e-08,5;DOID:423,1.20e-08,5;DOID:0080000,1.20e-08,5;DOID:11722,1.20e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!6.67e-21!45;UBERON:0002416!6.67e-21!45;UBERON:0002097!8.56e-20!40;UBERON:0000914!8.64e-14!83;UBERON:0002329!8.64e-14!83;UBERON:0003077!8.64e-14!83;UBERON:0003059!8.64e-14!83;UBERON:0007282!8.64e-14!83;UBERON:0009618!8.64e-14!83;UBERON:0007285!8.64e-14!83;UBERON:0003102!9.18e-14!95;UBERON:0002067!7.11e-13!9;UBERON:0004016!7.11e-13!9;UBERON:0010083!7.11e-13!9;UBERON:0004290!8.12e-11!70;UBERON:0002384!1.28e-10!375;UBERON:0000486!6.98e-08!82;UBERON:0005256!6.21e-07!143;UBERON:0002073!9.09e-07!4;UBERON:0005086!9.09e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.88e-37;9!UBERON:0002097;1.82e-22;41!UBERON:0002073;2.62e-22;5!UBERON:0003102;6.79e-17;50!UBERON:0002199;8.74e-16;46!UBERON:0002416;8.74e-16;46!UBERON:0000412;6.51e-14;3!UBERON:0001992;6.51e-14;3!UBERON:0005933;3.81e-10;2!UBERON:0005942;3.81e-10;2!UBERON:0005932;3.81e-10;2!UBERON:0001003;2.99e-07;15!UBERON:0007376;2.99e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,5.08e-38,9;UBERON:0004016,5.08e-38,9;UBERON:0010083,5.08e-38,9;UBERON:0002097,9.58e-31,41;UBERON:0002199,6.18e-27,46;UBERON:0002416,6.18e-27,46;UBERON:0002073,8.54e-23,5;UBERON:0005086,8.54e-23,5;UBERON:0000412,2.10e-14,3;UBERON:0001992,2.10e-14,3;UBERON:0003102,4.19e-13,99;UBERON:0002329,2.36e-10,71;UBERON:0003059,2.36e-10,71;UBERON:0007282,2.36e-10,71;UBERON:0004290,2.36e-10,71;UBERON:0009618,2.36e-10,71;UBERON:0003077,3.64e-10,72;UBERON:0007285,3.64e-10,72;UBERON:0005933,3.83e-10,2;UBERON:0005942,3.83e-10,2;UBERON:0005932,3.83e-10,2;UBERON:0007524,5.56e-10,73;UBERON:0007503,3.87e-09,78;UBERON:0000486,2.13e-08,83;UBERON:0001003,2.12e-07,15;UBERON:0007376,2.12e-07,15;UBERON:0007383,2.12e-07,15 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0,0.204000691244253,0,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0.167186495390678,0,0,0,2.33961959458865,0,0,0,0.896639238079726,2.08094956095805,0,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0.269421344139376,0,0.151357427644931,0,0,1.24864030732128,1.1409436430889,1.19558944441441,1.52664848236894,1.61872944368132,1.54495887372473,0.816616685019573,0.245668634623536,0.413303124703062,1.18800285728205,0.741800787835671,0.910161361938026,0.718618141816238,0.505008341862199,0.250237039743928,1.6623846929051,0,0.612975591598039,0.150238058906597,0.340296549480063,1.4351170855109,4.27114777637135,0.847727604638247,0.900273288253207,1.33968288009971,0.515281080091258,0.558350568994769,1.18143432568886,0.0974370051611986,0.252433774244115,2.48534726334208,0.323292113637624,1.42003837006646,2.41805035746337,0.67824236924195,0,0,0,0,0,0,0,0,0,1.56449532329816,1.92972281457866,2.76269842704961,1.39310378409594,5.77503585335668,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,7.15312891703765,0.845302752556,0,0,0.257207374262142,1.41849132023278,0.532844358032199,0,0.542621605391443,1.64648067356154,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0.718874566474748,0,0,1.44781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,1.24900292158013,0.788512075169673,0.937131319941706,0.300946099727719,2.27407504055985,1.03473071292505,0,0.368738337083406,0.347534457872331,0,0.343143423810856,0,0,0,0,0,0,0,0,0.561320188866147,0,0,0,0,0.462629081407967,0.355123450626254,1.14978018419333,0.519254429183621,1.39452454151951,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0.510281115829547,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.275673144969061,0.214840489736547,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89827654831236,0.38126038784765,1.02359116524534,0,0,0,0.719489830333259,0,0,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,1.15755106853338,0.655894752046633,1.42037263873893,0.30982349809975,0,0.573645408816206,0.196498082026242,0.7133421029625,1.06428319221179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0.988823245360557,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.522109747527277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822251547880505,0.993573058514948,0,0,0.160317640503067,0,0,0,0,0,0,0.124252535565433,0,1.35904206073614,1.15063130943567,0.305994652908965,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0,2.72620834856675,0.679872549120754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.701139929541673,0,0.568209015825267,0,0,0,0,0,0,0,0.449803112163605,0,0.414706207840855,2.92425886013794,1.04349012362347,0,0,0,1.81848659202559,0.107410557042488,0,0,2.80019435264208,0.686791410365586,0.673498977531838,0,0.963099152036517,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0.107824811396682,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0255760305528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.354996002191696,0.340853619036631,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:5498703..5498727,+ | |||
}} |
Revision as of 09:47, 22 January 2014
Short description: | p@chr6:5498703..5498727, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:5498703..5498727, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.18e-29 | 23 |
fibroblast of dermis | 2.27e-25 | 6 |
hair follicle cell | 8.54e-23 | 5 |
hair follicle dermal papilla cell | 2.10e-14 | 3 |
stem cell of epidermis | 2.10e-14 | 3 |
fibroblast | 1.32e-12 | 76 |
outer root sheath cell | 3.83e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
dermis | 5.08e-38 | 9 |
dermatome | 5.08e-38 | 9 |
future dermis | 5.08e-38 | 9 |
skin of body | 9.58e-31 | 41 |
integument | 6.18e-27 | 46 |
integumental system | 6.18e-27 | 46 |
hair follicle | 8.54e-23 | 5 |
hair follicle placode | 8.54e-23 | 5 |
dermal papilla | 2.10e-14 | 3 |
papillary layer of dermis | 2.10e-14 | 3 |
surface structure | 4.19e-13 | 99 |
somite | 2.36e-10 | 71 |
presomitic mesoderm | 2.36e-10 | 71 |
presumptive segmental plate | 2.36e-10 | 71 |
dermomyotome | 2.36e-10 | 71 |
trunk paraxial mesoderm | 2.36e-10 | 71 |
paraxial mesoderm | 3.64e-10 | 72 |
presumptive paraxial mesoderm | 3.64e-10 | 72 |
hair root sheath | 3.83e-10 | 2 |
hair outer root sheath | 3.83e-10 | 2 |
bulb of hair follicle | 3.83e-10 | 2 |
dense mesenchyme tissue | 5.56e-10 | 73 |
epithelial vesicle | 3.87e-09 | 78 |
multilaminar epithelium | 2.13e-08 | 83 |
skin epidermis | 2.12e-07 | 15 |
outer epithelium | 2.12e-07 | 15 |
enveloping layer of ectoderm | 2.12e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.20e-08 | 5 |
myotonic disease | 1.20e-08 | 5 |
muscle tissue disease | 1.20e-08 | 5 |
myopathy | 1.20e-08 | 5 |
muscular disease | 1.20e-08 | 5 |
myotonic dystrophy | 1.20e-08 | 5 |