Personal tools

FFCP PHASE1:Hg19::chr6:109762344..109762356,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|DPIdataset=robustDPI|EntrezGene=285755|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21557|TSSclassifier=S|UniProt=E7EX15,A9NIU9,Q8IXY8|association_with_transcript=17bp_to_ENST00000424445,ENST00000440797,ENST00000521072,NM_001111298,NM_173672_5end|coexpression_cluster_id=C123|description=CAGE_peak_5_at_PPIL6_5end|id=chr6:109762344..109762356,-|ontology_enrichment_celltype=CL:0000738!3.39e-37!140;CL:0000037!1.05e-36!172;CL:0000566!1.05e-36!172;CL:0000988!6.77e-34!182;CL:0002032!5.28e-29!165;CL:0000837!5.28e-29!165;CL:0002031!3.01e-25!124;CL:0000838!2.79e-24!52;CL:0002087!5.76e-24!119;CL:0000542!1.08e-23!53;CL:0000051!1.08e-23!53;CL:0002393!2.11e-17!9;CL:0002397!2.11e-17!9;CL:0000791!6.75e-17!18;CL:0000789!6.75e-17!18;CL:0002420!6.75e-17!18;CL:0002419!6.75e-17!18;CL:0000790!6.75e-17!18;CL:0000084!8.73e-16!25;CL:0000827!8.73e-16!25;CL:0000624!3.40e-12!6;CL:0000236!2.22e-11!14;CL:0000134!6.44e-11!358;CL:0002320!1.92e-10!365;CL:0000766!1.56e-09!76;CL:0000784!1.60e-09!3;CL:0000763!1.61e-09!112;CL:0000049!1.61e-09!112;CL:0000219!2.34e-09!390;CL:0000623!2.70e-09!3;CL:0000825!2.70e-09!3;CL:0000767!2.86e-09!3;CL:0000842!9.07e-09!3;CL:0000094!1.15e-08!8;CL:0000875!1.18e-08!3;CL:0002396!1.18e-08!3;CL:0000625!1.46e-08!11;CL:0002274!5.03e-08!5;CL:0000457!5.03e-08!5;CL:0002191!5.03e-08!5;CL:0000097!5.03e-08!5;CL:0000831!5.03e-08!5;CL:0002028!5.03e-08!5;CL:0000034!2.87e-07!444;CL:0000048!7.72e-07!430|ontology_enrichment_celltype_v019=CL:0000624;6.01e-32;6!CL:0000791;1.38e-26;18!CL:0000789;1.38e-26;18!CL:0002419;1.38e-26;18!CL:0000784;8.17e-24;3!CL:0000084;7.43e-19;25!CL:0000542;4.50e-15;53!CL:0000767;2.20e-11;3!CL:0000623;2.20e-11;3!CL:0000898;3.98e-11;3!CL:0000094;2.79e-09;8!CL:0000037;5.74e-09;1!CL:0001024;5.74e-09;1!CL:0000895;5.74e-09;1!CL:0000625;4.88e-07;11!CL:0000081;7.13e-07;11!CL:0000451;7.13e-07;10|ontology_enrichment_celltype_v019_2=CL:0000624,3.62e-32,6;CL:0000791,8.59e-27,18;CL:0000789,8.59e-27,18;CL:0002420,8.59e-27,18;CL:0002419,8.59e-27,18;CL:0000790,8.59e-27,18;CL:0000784,6.77e-24,3;CL:0000838,4.48e-23,52;CL:0000542,1.35e-22,53;CL:0000051,1.35e-22,53;CL:0000738,2.85e-21,136;CL:0000084,5.32e-19,25;CL:0000827,5.32e-19,25;CL:0000037,2.03e-18,168;CL:0000988,2.71e-17,177;CL:0002087,3.16e-14,115;CL:0002032,2.89e-12,161;CL:0000837,2.89e-12,161;CL:0002031,9.16e-12,120;CL:0000623,2.04e-11,3;CL:0000825,2.04e-11,3;CL:0000767,3.09e-11,3;CL:0000898,3.60e-11,3;CL:0000094,3.76e-09,8;CL:0001024,4.54e-09,1;CL:0000810,9.17e-09,1;CL:0000895,9.17e-09,1;CL:0002436,9.17e-09,1;CL:0002427,9.17e-09,1;CL:0002428,9.17e-09,1;CL:0002429,9.17e-09,1;CL:0002433,9.17e-09,1;CL:0002431,9.17e-09,1;CL:0002432,9.17e-09,1;CL:0000625,4.32e-07,11;CL:0000451,6.78e-07,10;CL:0000081,8.82e-07,11|ontology_enrichment_development_v019=CL:0000790;1.38e-26;18!CL:0000051;4.50e-15;53!CL:0002427;5.74e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!8.46e-10!375;UBERON:0002390!2.21e-07!102;UBERON:0003061!2.21e-07!102|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,1.15148819429164,0.928896739896456,0,0,0,0,0,1.76160263600908,0.553995408531877,0,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0.422510572623884,0.425208599930087,0.209658645508376,0,0,0,1.42506371870624,0.19891667719909,0.91332076882317,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0.574752439954483,0,0.954053754535364,2.84606484554724,1.76171156811282,1.91136614062614,1.32171328579026,1.12101712596307,0,1.37696839079683,1.96505381374582,3.08402248499264,0,1.95553359980154,1.89379122293893,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0.296573126324121,0.535081656179426,1.04535523804977,0,1.14966148080576,0.68725489096526,0.253019692019503,0,0.651083453856419,0,0.150575119077773,0,0,0,0.821127996921047,3.42731463482045,3.7441627409691,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,2.8618874916641,1.71598473234038,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,1.72502059887614,2.82354679815446,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0.211673582723883,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0.157265941855896,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@PPIL6}}
{{FFCP
|DHSsupport=supported
|DPIdataset=robust
|EntrezGene=285755
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=21557
|TSSclassifier=strong
|UniProt=E7EX15,A9NIU9,Q8IXY8
|association_with_transcript=17bp_to_ENST00000424445,ENST00000440797,ENST00000521072,NM_001111298,NM_173672_5end
|coexpression_cluster_id=C123
|description=CAGE_peak_5_at_PPIL6_5end
|id=chr6:109762344..109762356,-
|ontology_enrichment_celltype=CL:0000738!3.39e-37!140;CL:0000037!1.05e-36!172;CL:0000566!1.05e-36!172;CL:0000988!6.77e-34!182;CL:0002032!5.28e-29!165;CL:0000837!5.28e-29!165;CL:0002031!3.01e-25!124;CL:0000838!2.79e-24!52;CL:0002087!5.76e-24!119;CL:0000542!1.08e-23!53;CL:0000051!1.08e-23!53;CL:0002393!2.11e-17!9;CL:0002397!2.11e-17!9;CL:0000791!6.75e-17!18;CL:0000789!6.75e-17!18;CL:0002420!6.75e-17!18;CL:0002419!6.75e-17!18;CL:0000790!6.75e-17!18;CL:0000084!8.73e-16!25;CL:0000827!8.73e-16!25;CL:0000624!3.40e-12!6;CL:0000236!2.22e-11!14;CL:0000134!6.44e-11!358;CL:0002320!1.92e-10!365;CL:0000766!1.56e-09!76;CL:0000784!1.60e-09!3;CL:0000763!1.61e-09!112;CL:0000049!1.61e-09!112;CL:0000219!2.34e-09!390;CL:0000623!2.70e-09!3;CL:0000825!2.70e-09!3;CL:0000767!2.86e-09!3;CL:0000842!9.07e-09!3;CL:0000094!1.15e-08!8;CL:0000875!1.18e-08!3;CL:0002396!1.18e-08!3;CL:0000625!1.46e-08!11;CL:0002274!5.03e-08!5;CL:0000457!5.03e-08!5;CL:0002191!5.03e-08!5;CL:0000097!5.03e-08!5;CL:0000831!5.03e-08!5;CL:0002028!5.03e-08!5;CL:0000034!2.87e-07!444;CL:0000048!7.72e-07!430
|ontology_enrichment_celltype_v019=CL:0000624;6.01e-32;6!CL:0000791;1.38e-26;18!CL:0000789;1.38e-26;18!CL:0002419;1.38e-26;18!CL:0000784;8.17e-24;3!CL:0000084;7.43e-19;25!CL:0000542;4.50e-15;53!CL:0000767;2.20e-11;3!CL:0000623;2.20e-11;3!CL:0000898;3.98e-11;3!CL:0000094;2.79e-09;8!CL:0000037;5.74e-09;1!CL:0001024;5.74e-09;1!CL:0000895;5.74e-09;1!CL:0000625;4.88e-07;11!CL:0000081;7.13e-07;11!CL:0000451;7.13e-07;10
|ontology_enrichment_celltype_v019_2=CL:0000624,3.62e-32,6;CL:0000791,8.59e-27,18;CL:0000789,8.59e-27,18;CL:0002420,8.59e-27,18;CL:0002419,8.59e-27,18;CL:0000790,8.59e-27,18;CL:0000784,6.77e-24,3;CL:0000838,4.48e-23,52;CL:0000542,1.35e-22,53;CL:0000051,1.35e-22,53;CL:0000738,2.85e-21,136;CL:0000084,5.32e-19,25;CL:0000827,5.32e-19,25;CL:0000037,2.03e-18,168;CL:0000988,2.71e-17,177;CL:0002087,3.16e-14,115;CL:0002032,2.89e-12,161;CL:0000837,2.89e-12,161;CL:0002031,9.16e-12,120;CL:0000623,2.04e-11,3;CL:0000825,2.04e-11,3;CL:0000767,3.09e-11,3;CL:0000898,3.60e-11,3;CL:0000094,3.76e-09,8;CL:0001024,4.54e-09,1;CL:0000810,9.17e-09,1;CL:0000895,9.17e-09,1;CL:0002436,9.17e-09,1;CL:0002427,9.17e-09,1;CL:0002428,9.17e-09,1;CL:0002429,9.17e-09,1;CL:0002433,9.17e-09,1;CL:0002431,9.17e-09,1;CL:0002432,9.17e-09,1;CL:0000625,4.32e-07,11;CL:0000451,6.78e-07,10;CL:0000081,8.82e-07,11
|ontology_enrichment_development_v019=CL:0000790;1.38e-26;18!CL:0000051;4.50e-15;53!CL:0002427;5.74e-09;1
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002384!8.46e-10!375;UBERON:0002390!2.21e-07!102;UBERON:0003061!2.21e-07!102
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,1.15148819429164,0.928896739896456,0,0,0,0,0,1.76160263600908,0.553995408531877,0,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0.422510572623884,0.425208599930087,0.209658645508376,0,0,0,1.42506371870624,0.19891667719909,0.91332076882317,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0.574752439954483,0,0.954053754535364,2.84606484554724,1.76171156811282,1.91136614062614,1.32171328579026,1.12101712596307,0,1.37696839079683,1.96505381374582,3.08402248499264,0,1.95553359980154,1.89379122293893,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0.296573126324121,0.535081656179426,1.04535523804977,0,1.14966148080576,0.68725489096526,0.253019692019503,0,0.651083453856419,0,0.150575119077773,0,0,0,0.821127996921047,3.42731463482045,3.7441627409691,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,2.8618874916641,1.71598473234038,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,1.72502059887614,2.82354679815446,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0.211673582723883,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0.157265941855896,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p5@PPIL6
}}

Revision as of 13:19, 22 January 2014

Short description:p5@PPIL6
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_5_at_PPIL6_5end
Coexpression cluster:C123_CD19_Natural_CD8_CD4_CD14_Peripheral_Basophils
Association with transcript: 17bp_to_ENST00000424445, ENST00000440797, ENST00000521072, NM_001111298, NM_173672_5end
EntrezGene:PPIL6
HGNC: 21557
UniProt: E7EX15A9NIU9Q8IXY8
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
4.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data