FFCP PHASE1:Hg19::chr7:20687017..20687030,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340273 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=46 | |||
|TSSclassifier=strong | |||
|UniProt=Q2M3G0 | |||
|association_with_transcript=-14bp_to_ENST00000258738_5end | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_2_at_ABCB5_5end | |||
|id=chr7:20687017..20687030,+ | |||
|ontology_enrichment_celltype=CL:0000147!5.30e-24!14;CL:0000325!3.63e-17!39;CL:0000148!1.12e-14!10;CL:0000541!1.12e-14!10;CL:0000149!3.06e-12!4;CL:0000710!1.81e-10!20;CL:0002567!3.84e-10!3;CL:0002586!2.23e-09!3;CL:0000075!7.74e-09!27 | |||
|ontology_enrichment_celltype_v019=CL:0000148;7.10e-52;10!CL:0000147;6.42e-37;14!CL:0002567;1.27e-32;3!CL:0000710;1.11e-25;20!CL:0000075;7.19e-19;27!CL:0002077;3.33e-13;34!CL:0002566;4.53e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,7.10e-52,10;CL:0000541,7.10e-52,10;CL:0000147,6.42e-37,14;CL:0002567,1.27e-32,3;CL:0000710,1.11e-25,20;CL:0000075,7.19e-19,27;CL:0002077,7.46e-15,34;CL:0002566,4.53e-12,1;CL:0000333,1.32e-11,41;CL:0000133,5.68e-08,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!3.11e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;4.61e-22;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.37e-22,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.06e-11!115;UBERON:0007625!6.34e-11!11;UBERON:0000020!8.89e-10!23;UBERON:0000966!1.01e-09!5;UBERON:0005388!1.01e-09!5;UBERON:0001802!1.01e-09!5;UBERON:0000970!2.14e-09!20;UBERON:0001781!2.23e-09!3;UBERON:0001782!2.23e-09!3;UBERON:0005424!2.23e-09!3;UBERON:0001032!2.76e-09!24;UBERON:0004456!2.76e-09!24;UBERON:0002104!7.23e-09!21;UBERON:0000019!7.92e-08!19;UBERON:0000047!7.92e-08!19;UBERON:0004088!7.92e-08!19;UBERON:0003072!7.92e-08!19;UBERON:0003071!7.92e-08!19;UBERON:0004128!7.92e-08!19;UBERON:0001456!5.91e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.62e-14;3!UBERON:0004054;1.62e-14;3!UBERON:0001000;1.63e-11;1!UBERON:0001301;1.63e-11;1!UBERON:0005352;1.63e-11;1!UBERON:0005904;3.98e-11;4!UBERON:0003135;6.08e-09;11!UBERON:0003101;1.11e-07;22!UBERON:0000079;1.11e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.62e-14,3;UBERON:0004054,1.62e-14,3;UBERON:0001000,1.47e-11,1;UBERON:0005352,1.47e-11,1;UBERON:0001301,1.81e-11,1;UBERON:0005904,3.99e-11,4;UBERON:0003135,5.83e-09,11;UBERON:0003101,1.11e-07,22;UBERON:0000079,1.11e-07,22 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,0,2.23480547213644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0,23.1132335223495,25.5932245124046,26.9600128583108,8.55362230113526,28.0719055080073,34.2391085942066,68.0266909660776,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.656029291399411,0.976135183992909,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12778627451629,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973033209536731,0,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.04836000945218,0,0,0,0,0.387956065953678,0,0.677942222341597,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,10.767087345457,3.42558400253961,0,0,0,0,0,0,0.378806010550178,3.27038272278348,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0.354809480650555,0,0,0,0,0,0,2.11931350696388,0,0,0,0,0,9.93523964055523,0,0,0,0,0,0,0,0,0.118332000730565,0.426067023795788,0,0,0,0,0,0,0,0,0.513314034281235,0,0.485710993059139,0,0,0,0,0,0,0.308696632431779,0,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5006970412019,0.267964130156178,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0.977931553462932,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p2@ABCB5 | |||
}} |
Revision as of 15:57, 22 January 2014
Short description: | p2@ABCB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ABCB5_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -14bp_to_ENST00000258738_5end |
EntrezGene: | ABCB5 |
HGNC: | 46 |
UniProt: | Q2M3G0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 7.10e-52 | 10 |
melanoblast | 7.10e-52 | 10 |
pigment cell | 6.42e-37 | 14 |
light melanocyte | 1.27e-32 | 3 |
neurecto-epithelial cell | 1.11e-25 | 20 |
columnar/cuboidal epithelial cell | 7.19e-19 | 27 |
ecto-epithelial cell | 7.46e-15 | 34 |
dark melanocyte | 4.53e-12 | 1 |
migratory neural crest cell | 1.32e-11 | 41 |
neurectodermal cell | 5.68e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.62e-14 | 3 |
internal male genitalia | 1.62e-14 | 3 |
vas deferens | 1.47e-11 | 1 |
spermatic cord | 1.47e-11 | 1 |
epididymis | 1.81e-11 | 1 |
duct of male reproductive system | 3.99e-11 | 4 |
male reproductive organ | 5.83e-09 | 11 |
male organism | 1.11e-07 | 22 |
male reproductive system | 1.11e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.37e-22 | 2 |