FFCP PHASE1:Hg19::chr7:29603477..29603510,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222171 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22310 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IV56,A4D1A1 | |||
|association_with_transcript=50bp_to_ENST00000319694,NM_175887,uc003tac.1_5end | |||
|coexpression_cluster_id=C360 | |||
|description=CAGE_peak_2_at_PRR15_5end | |||
|id=chr7:29603477..29603510,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.42e-13!254 | |||
|ontology_enrichment_celltype_v019=CL:0000349;7.38e-10;19!CL:1000507;3.01e-09;10!CL:1000494;3.01e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.16e-12,253;CL:0000349,8.00e-10,19;CL:1000507,2.63e-09,10;CL:1000494,2.63e-09,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.89e-16!106;DOID:0050687!7.16e-11!143;DOID:299!5.20e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:299;2.13e-12;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.07e-14,106;DOID:299,2.12e-12,25;DOID:0050687,7.38e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.80e-14!169;UBERON:0000925!2.80e-14!169;UBERON:0006595!2.80e-14!169;UBERON:0004921!2.29e-13!129;UBERON:0004185!2.29e-13!129;UBERON:0001007!3.02e-13!155;UBERON:0001555!3.02e-13!155;UBERON:0007026!3.02e-13!155;UBERON:0000466!2.59e-12!126;UBERON:0000077!2.99e-12!130;UBERON:0005631!3.60e-11!14;UBERON:0000158!3.60e-11!14;UBERON:0009569!8.67e-10!113;UBERON:0000464!1.39e-09!104;UBERON:0005409!5.07e-09!35;UBERON:0005177!9.99e-09!107;UBERON:0000160!2.45e-08!27;UBERON:0002100!3.47e-08!216;UBERON:0003124!5.93e-08!7;UBERON:0003104!7.14e-08!238;UBERON:0009142!7.14e-08!238;UBERON:0001041!1.04e-07!98;UBERON:0000478!1.06e-07!24;UBERON:0003886!1.46e-07!63;UBERON:0002553!6.13e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.54e-11;22!UBERON:0005631;6.37e-10;10!UBERON:0000158;6.37e-10;10!UBERON:0000478;9.94e-10;24!UBERON:0000160;1.36e-09;17!UBERON:0004211;3.01e-09;10!UBERON:0009773;3.01e-09;10!UBERON:0001231;3.01e-09;10!UBERON:0004810;3.01e-09;10!UBERON:0001987;2.93e-07;4!UBERON:0004921;3.31e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.44e-15,14;UBERON:0000158,2.44e-15,14;UBERON:0005177,1.22e-11,101;UBERON:0003124,1.79e-11,7;UBERON:0009569,3.59e-10,112;UBERON:0000478,1.05e-09,24;UBERON:0000160,1.08e-09,17;UBERON:0005409,2.02e-09,25;UBERON:0004810,2.63e-09,10;UBERON:0004921,1.89e-08,118;UBERON:0004119,2.74e-08,160;UBERON:0000925,2.74e-08,160;UBERON:0006595,2.74e-08,160;UBERON:0002100,8.91e-08,199;UBERON:0001007,2.55e-07,145;UBERON:0001555,2.55e-07,145;UBERON:0007026,2.55e-07,145;UBERON:0001987,2.87e-07,4;UBERON:0004340,2.87e-07,4;UBERON:0005172,3.69e-07,54;UBERON:0005173,3.69e-07,54;UBERON:0002417,4.28e-07,60;UBERON:0000916,4.28e-07,60;UBERON:0004871,4.63e-07,8 | |||
|phase1_expression=2.72517568905835,0.428201047781966,0.281908808191942,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0,0,117.958340950293,107.880694095438,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.87879847716362,0,0,0,0,0,1.23852898652861,0,0,0.369754010166788,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.800791974072025,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,4.85877735005415,0,0,0.144846518960824,0,1.45990461090791,0,0,0,1.30979075497713,1.09288586487763,0,0,0,0,0,0,0,0.198762407366705,0,0,3.39184765154406,1.25849830862972,0,3.55291443112578,0,0,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,1.49091585508596,1.13967460498122,0,0,0,0.560677600142307,0,0.98667019366864,1.55605517699883,3.09834545760283,6.21155231831143,1.21085942115945,4.03323147135999,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,10.0117749813183,10.7792721272436,0,0.125118519871964,0,0,0.30648779579902,0,4.99101605904093,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,0.272746120590835,0.286804595389004,0.975789649036763,1.32529768321485,2.44007280025989,2.07322110030741,3.5324919122588,0.72995471815166,0,0,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,5.7620361586396,2.94017422771084,0,0,0.590789906681404,0,12.0528669772251,2.23038153388083,0.219500570817251,1.1240175325762,0.904760751704678,0,0,0,0,0,6.45747818297019,0.144366447761074,0,0,13.4334747653077,9.4433477830436,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29271715757778,0,0,0.26593811658487,0,0,1.41849132023278,0.532844358032199,1.85871391755592,0.542621605391443,0,0,1.06617584622764,0,0,0,0.799783929456456,0,0,0,0.479249710983165,0,0,1.30303176000821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0.601892199455438,0,3.10419213877515,0,0.553107505625109,0,0,0,0,0,0,228.255061299033,108.183035681823,165.407490451335,1.98486246255021,0.306923946576125,0,1.66580894032411,0.511707249066704,0,8.90508398669946,0.154209693802656,0.355123450626254,0,0,0.232420756919918,9.30617761855491,0.200506470303285,0.828728900423067,0,0,0,10.3775910968705,3.31165949548983,1.56869953835371,4.38417673959782,1.58327443339314,0,0,0,0,0,2.00675909541941,6.626783099171,14.1282921517883,2.46262230194396,0,0,0,0.328014645699706,0,1.95777922130672,0,0,0,0,4.82051789532479,0,0,0,0.413509717453592,0.107420244868274,0,0.0852266274161009,0,0.661139661443912,0,0,0.30347334256665,0,0,0,0.308033580176089,0,0,0,0.572499546967965,0,0.949138274156178,3.62197368455267,1.27948895655667,0.42793898803392,0,0,0,0.274537029736055,0.235624804691373,0.404364963146632,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0.811641507850816,0,0.281695602532241,0.286822704408103,0.294747123039363,2.1400263088875,0,0,0,0,0,0.192444225451024,0,1.08890984861323,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9712432326576,0,0,0,0,50.6138307643903,35.0418323382514,50.6815158463733,0,0,0,0,0,1.59398390600856,11.0513566212459,0.503865495708552,0,0,0,1.3480252672099,7.51888933637558,0,2.07151151837561,0,0,0,0,0,7.0315495493013,9.88297999957011,0,1.137934482855,0,2.12748913591143,0.344743373241465,0,0,0,0,0,0,0,0,0,7.11061095820877,7.38722481636452,0.113942055847001,0.46112780877612,1.25660702173681,1.3037684630641,48.8071774389837,28.1204611743717,50.1052689457517,0,0,0,0,0,0,0,0,0.210998064528027,9.95720129770801,6.64359435739522,0,29.8578579323551,31.9331807857054,28.1073866669468,0,0,0,0.067401132980677,0,0,0,4.50028623543806,0,0.394584402849391,9.67925728389311,0,0.189559738885464,0,0.518440956986236,3.32326936353593,0,1.56966459203613,4.77889719091835,13.3766486634003,0,2.60339607502696,0.195984794828755,0.0870592065804026,3.4945333648406,0,0.19351266257817,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,14.861905087845,0.160317640503067,4.4825128895264,0.999048047910651,24.7835517505062,0,0,0.14405479798815,0.124252535565433,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,5.19165401297377,0,0,0,0,6.98975697164723,2.83619456306005,2.47247575143499,2.29172049104229,0.295282444544246,0,0,0,1.44677833618517,1.2378549293751,1.24632101408756,1.5748172408605,0.77380195455795,0,0.670869375198532,5.12237097444788,3.04236611182989,0.739202355635845,0,4.03021914370835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27717094710824,19.0300056025501,1.38823636338003,0.471612915298998,2.07119527673598,0,1.38328142328561,0.243585196761792,0.638341257770182,0,0,0,0,24.0292767262858,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0.470531639396343,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0,0,0,0.907385542579434,0,0,0,0,0,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0.46403375987849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| |||
|short_description=p2@PRR15 | |||
}} |
Revision as of 16:19, 22 January 2014
Short description: | p2@PRR15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRR15_5end |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | 50bp_to_ENST00000319694, NM_175887, uc003tac.1_5end |
EntrezGene: | PRR15 |
HGNC: | 22310 |
UniProt: | Q8IV56A4D1A1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.16e-12 | 253 |
extraembryonic cell | 8.00e-10 | 19 |
kidney tubule cell | 2.63e-09 | 10 |
nephron tubule epithelial cell | 2.63e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.44e-15 | 14 |
membranous layer | 2.44e-15 | 14 |
trunk region element | 1.22e-11 | 101 |
chorion | 1.79e-11 | 7 |
subdivision of trunk | 3.59e-10 | 112 |
extraembryonic structure | 1.05e-09 | 24 |
intestine | 1.08e-09 | 17 |
gastrointestinal system | 2.02e-09 | 25 |
nephron tubule epithelium | 2.63e-09 | 10 |
subdivision of digestive tract | 1.89e-08 | 118 |
endoderm-derived structure | 2.74e-08 | 160 |
endoderm | 2.74e-08 | 160 |
presumptive endoderm | 2.74e-08 | 160 |
trunk | 8.91e-08 | 199 |
digestive system | 2.55e-07 | 145 |
digestive tract | 2.55e-07 | 145 |
primitive gut | 2.55e-07 | 145 |
placenta | 2.87e-07 | 4 |
allantois | 2.87e-07 | 4 |
abdomen element | 3.69e-07 | 54 |
abdominal segment element | 3.69e-07 | 54 |
abdominal segment of trunk | 4.28e-07 | 60 |
abdomen | 4.28e-07 | 60 |
somatic layer of lateral plate mesoderm | 4.63e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.07e-14 | 106 |
adenocarcinoma | 2.12e-12 | 25 |
cell type cancer | 7.38e-09 | 143 |