FFCP PHASE1:Hg19::chr7:156788251..156788255,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:156788251..156788255,- | |||
|id=chr7:156788251..156788255,- | |||
|ontology_enrichment_celltype=CL:0002150!5.61e-08!3;CL:0000861!5.61e-08!3;CL:0000066!5.77e-08!254;CL:0000242!6.27e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.35e-66;2!CL:0000242;3.35e-66;2!CL:0000312;2.91e-27;5!CL:0000240;6.41e-23;6!CL:0000311;6.41e-23;6!CL:0000079;6.41e-23;6!CL:0000237;6.41e-23;6!CL:0002535;1.07e-17;2!CL:0000095;1.99e-16;17!CL:0000362;1.17e-15;9!CL:0002319;8.46e-12;25!CL:0002159;1.94e-10;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.84e-66,2;CL:0000312,2.72e-27,5;CL:0000240,6.07e-23,6;CL:0000311,6.07e-23,6;CL:0000079,6.07e-23,6;CL:0000237,6.07e-23,6;CL:0000036,6.07e-23,6;CL:0000357,6.07e-23,6;CL:0000114,6.07e-23,6;CL:0002535,1.27e-17,2;CL:0000095,1.94e-16,17;CL:0000123,1.94e-16,17;CL:0000362,1.13e-15,9;CL:0002319,8.31e-12,25;CL:0002159,1.90e-10,14;CL:0000333,1.11e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000357;6.41e-23;6!CL:0000114;6.41e-23;6!UBERON:0003056;1.85e-12;3 | |||
|ontology_enrichment_disease=DOID:0050687!7.42e-27!143;DOID:162!5.41e-25!235;DOID:14566!3.72e-24!239;DOID:305!2.75e-18!106;DOID:3119!1.40e-13!14;DOID:0050686!4.49e-11!137 | |||
|ontology_enrichment_disease_v019=DOID:4362;7.01e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,7.49e-08,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.07e-17;2!UBERON:0004801;1.07e-17;2!UBERON:0001003;8.28e-10;15!UBERON:0007376;8.28e-10;15!UBERON:0000966;5.35e-08;5!UBERON:0005388;5.35e-08;5!UBERON:0001802;5.35e-08;5!UBERON:0000002;8.97e-07;6!UBERON:0001560;8.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.27e-17,2;UBERON:0004801,1.27e-17,2;UBERON:0001003,8.10e-10,15;UBERON:0007376,8.10e-10,15;UBERON:0007383,8.10e-10,15;UBERON:0000966,7.17e-07,6;UBERON:0005388,7.17e-07,6;UBERON:0001802,7.17e-07,6;UBERON:0000002,9.49e-07,6;UBERON:0001560,9.49e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236132343941038,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,1.0077309914171,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0.520855522170466,0.787139999965761,0,0.1137934482855,0,0.472775363535873,0.689486746482929,0.291604613383254,0.173624994933292,0,0,0,0,0.295547618953547,0,0,0,0,0,0.23056390438806,0.359030577639089,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0.995261931078505,0.0884575645033392,0,0,0.247127877893006,0.104421949505455,0,0,0,0,0,0.242780379534093,0,1.20990716048664,0,0,0,0.518440956986236,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0.174118413160805,0,0,0.0967563312890851,0.219267951258557,0.328461828212837,0,0.0882561266915003,0,0,0,0,0.195551382734803,0,0.426905989478705,0,0.144090417154106,0.229073192331831,0.514784993585894,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0.0824158583811665,0,0.492137407573744,0.508039992394707,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0,2.81000943484129,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0.76872455576384,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0.786329709279482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,3.31828584638726,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0.294450700845729,0,0,0,0,0,0,0.198950775161368,0,0.5647304101948,0,0.301925687133347,0,0,2.35158648180761,0,0.942706188406504,0,0,0.8453114551668,0,0,0,0,0.178553938605658,0,0,0,0,0,0.788857810965923,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:156788251..156788255,- | |||
}} |
Revision as of 20:20, 22 January 2014
Short description: | p@chr7:156788251..156788255, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:156788251..156788255, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.84e-66 | 2 |
keratinocyte | 2.72e-27 | 5 |
stratified squamous epithelial cell | 6.07e-23 | 6 |
keratin accumulating cell | 6.07e-23 | 6 |
stratified epithelial cell | 6.07e-23 | 6 |
keratinizing barrier epithelial cell | 6.07e-23 | 6 |
epithelial fate stem cell | 6.07e-23 | 6 |
stratified epithelial stem cell | 6.07e-23 | 6 |
surface ectodermal cell | 6.07e-23 | 6 |
epithelial cell of cervix | 1.27e-17 | 2 |
neuron associated cell | 1.94e-16 | 17 |
neuron associated cell (sensu Vertebrata) | 1.94e-16 | 17 |
epidermal cell | 1.13e-15 | 9 |
neural cell | 8.31e-12 | 25 |
general ecto-epithelial cell | 1.90e-10 | 14 |
migratory neural crest cell | 1.11e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.27e-17 | 2 |
cervix epithelium | 1.27e-17 | 2 |
skin epidermis | 8.10e-10 | 15 |
outer epithelium | 8.10e-10 | 15 |
enveloping layer of ectoderm | 8.10e-10 | 15 |
retina | 7.17e-07 | 6 |
photoreceptor array | 7.17e-07 | 6 |
posterior segment of eyeball | 7.17e-07 | 6 |
uterine cervix | 9.49e-07 | 6 |
neck of organ | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 7.49e-08 | 5 |