FFCP PHASE1:Hg19::chr9:119162143..119162169,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=5069 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8602 | |||
|TSSclassifier=not | |||
|UniProt=Q8IWT8 | |||
|association_with_transcript=-193bp_to_AY140907_5end | |||
|coexpression_cluster_id=C776 | |||
|description=CAGE_peak_14_at_PAPPA_5end | |||
|id=chr9:119162143..119162169,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.15e-22!180;CL:0000680!6.86e-18!57;CL:0000056!6.86e-18!57;CL:0000355!6.86e-18!57;CL:0000187!2.19e-17!54;CL:0000183!4.44e-16!59;CL:0000393!2.04e-15!60;CL:0000211!2.04e-15!60;CL:0000192!9.09e-15!42;CL:0000514!9.09e-15!42;CL:0000359!1.60e-14!32;CL:0000057!8.48e-11!75;CL:0000048!5.82e-10!430;CL:0000723!2.14e-09!436;CL:0000034!2.26e-09!444;CL:0002334!3.90e-08!12;CL:0000222!1.21e-07!119;CL:0002494!2.40e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002541;8.22e-16;3!CL:0002539;1.04e-12;10!CL:0000359;1.43e-12;32!CL:0000569;1.85e-11;4!CL:0002595;4.87e-09;5!CL:0000192;1.62e-08;43!CL:0000197;8.69e-08;6!CL:0000098;8.69e-08;6!CL:0002167;8.69e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.67e-16,3;CL:0000359,1.30e-13,32;CL:0002539,9.41e-13,10;CL:0000192,1.22e-11,43;CL:0000514,1.22e-11,43;CL:0000569,2.19e-11,4;CL:0000011,2.19e-11,4;CL:0002595,3.34e-09,5;CL:0000187,1.24e-08,55;CL:0000680,4.47e-08,58;CL:0000056,4.47e-08,58;CL:0000355,4.47e-08,58;CL:0000197,7.31e-08,6;CL:0000098,7.31e-08,6;CL:0002167,7.31e-08,6;CL:0000393,1.41e-07,61;CL:0000211,1.41e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000011;1.85e-11;4!CL:0000514;1.62e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!6.46e-16!61;UBERON:0002036!6.46e-16!61;UBERON:0003082!6.46e-16!61;UBERON:0002385!4.96e-15!63;UBERON:0001015!4.96e-15!63;UBERON:0000383!4.96e-15!63;UBERON:0004290!2.31e-13!70;UBERON:0000486!2.55e-11!82;UBERON:0001637!2.89e-11!42;UBERON:0003509!2.89e-11!42;UBERON:0004572!2.89e-11!42;UBERON:0004872!3.05e-11!84;UBERON:0004573!4.68e-11!33;UBERON:0004571!4.68e-11!33;UBERON:0000914!7.11e-11!83;UBERON:0002329!7.11e-11!83;UBERON:0003077!7.11e-11!83;UBERON:0003059!7.11e-11!83;UBERON:0007282!7.11e-11!83;UBERON:0009618!7.11e-11!83;UBERON:0007285!7.11e-11!83;UBERON:0002049!6.85e-10!79;UBERON:0007798!6.85e-10!79;UBERON:0004535!1.41e-09!110;UBERON:0001009!5.48e-09!113;UBERON:0001981!2.28e-08!60;UBERON:0007500!2.28e-08!60;UBERON:0004537!2.28e-08!60;UBERON:0006965!2.28e-08!60;UBERON:0003914!4.10e-07!118;UBERON:0000055!6.47e-07!69;UBERON:0001135!7.54e-07!15;UBERON:0005256!8.65e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.88e-18;33!UBERON:0004571;9.88e-18;33!UBERON:0003124;8.22e-16;3!UBERON:0000920;8.22e-16;3!UBERON:0004237;1.04e-12;10!UBERON:0004695;1.04e-12;10!UBERON:0002111;1.04e-12;10!UBERON:0004178;1.04e-12;10!UBERON:0001637;9.28e-12;42!UBERON:0003509;9.28e-12;42!UBERON:0004572;9.28e-12;42!UBERON:0000947;6.39e-11;21!UBERON:0010191;6.39e-11;21!UBERON:0003834;4.87e-09;5!UBERON:0001533;4.87e-09;5!UBERON:0001135;2.31e-08;15!UBERON:0005631;2.98e-08;10!UBERON:0000158;2.98e-08;10!UBERON:0000478;5.94e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,4.97e-19,33;UBERON:0004571,4.97e-19,33;UBERON:0000920,4.67e-16,3;UBERON:0001637,2.06e-14,42;UBERON:0003509,2.06e-14,42;UBERON:0004572,2.06e-14,42;UBERON:0004237,9.41e-13,10;UBERON:0004695,9.41e-13,10;UBERON:0002111,9.41e-13,10;UBERON:0004178,9.41e-13,10;UBERON:0003124,5.24e-12,7;UBERON:0004872,1.51e-11,83;UBERON:0000947,6.47e-11,21;UBERON:0010191,6.47e-11,21;UBERON:0007500,1.50e-09,59;UBERON:0001981,1.50e-09,59;UBERON:0004537,1.50e-09,59;UBERON:0006965,1.50e-09,59;UBERON:0003834,3.34e-09,5;UBERON:0001533,3.34e-09,5;UBERON:0005631,5.97e-09,14;UBERON:0000158,5.97e-09,14;UBERON:0001135,2.16e-08,15;UBERON:0000055,5.71e-08,68;UBERON:0004535,6.92e-08,109;UBERON:0002049,7.24e-08,78;UBERON:0007798,7.24e-08,78;UBERON:0001009,1.38e-07,112;UBERON:0001134,2.02e-07,62;UBERON:0002036,2.02e-07,62;UBERON:0003082,2.02e-07,62;UBERON:0002385,4.00e-07,64;UBERON:0001015,4.00e-07,64;UBERON:0000383,4.00e-07,64;UBERON:0000478,5.83e-07,24 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0.436882744260345,0.791300934685361,0,0,2.6893005858071,4.21886169616784,4.38186054232424,2.92759679274304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0.50133791063589,0.289693037921647,0,0.973269740605272,0.0945348171640679,0.443458794925128,0.527008714158756,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,1.32409180813219,2.0078563452417,0.354668382198357,0,0,0.98667019366864,0,0.67355336034844,0.490385709340376,0.151357427644931,1.15235184896,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,1.23633464639278,0,0,0,0,0,0,0.30648779579902,0,0.794025282120147,0,0.640672166455702,0,0,0,0,0.37223371266318,0.168776332241266,0.194874010322397,0,0.276149695926898,0,0.355009592516614,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.57191197463259,0,0,0.65147236858747,0.355391948742546,0.791951872933429,0.602878754119172,0,2.19940580600526,0,0,0,0.718874566474748,1.14861935834114,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0.542530047399471,2.28767947683888,1.60586089917446,1.41932173530541,0.117141414992713,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.907170879989041,1.48864684691266,0.306923946576125,0.841980283299221,0.896974044789907,0,0.482561763430822,0,0.308419387605311,0.532685175939381,0.246381468041427,1.55776328755086,0.232420756919918,0,0,0,0.34444334449382,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0.290012154876366,0.154048617114644,0,0.137836572484531,0.214840489736547,0.435050081742686,0.170453254832202,0,0,0,0,0,0,5.03699754929024,0,0.616067160352178,0.532306030317022,0,0.9266210955196,1.28812398067792,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0.179872457583315,0.274537029736055,0.589062011728432,0.404364963146632,0,1.68503382495592,0,0.731140468893853,1.05650146756755,0.136499911407986,1.1312434556297,0,0,1.99031692572366,1.75380354101505,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0.196498082026242,0.7133421029625,0,0.211107635297664,0.987884678879706,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14870036263921,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,4.46601623624687,1.74035427463538,13.3258694004659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0,0.171986032471617,0,0.0730893170861856,0,0,0.0882561266915003,0,0.411125773940253,0.19871461170299,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0,0,1.07572403599707,0.191915197319445,0,0,0,0,1.72844298240254,0,0,0,0.511164065356265,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0.235265819698172,0,0,0.298509605773748,0,0,0.378806010550178,0.251567901752575,0.889811221596536,1.37304041038154,0.302461847526478,1.24349760466224,2.36568239983414,1.27437413730962,0.449803112163605,0.155262956876259,0,0,0.521745061811734,0.300515217994437,0.761610424337591,0.813741466409323,0.545545977607678,0.644463342254931,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0,0,0,2.50724377514082,0,0,0.176689145945881,0.964570191354574,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,1.41539347670307,0,0.33946505990805,1.70059936081346,1.98297222814403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,1.47394725759087,0,0,0,0,0,0,0,0.496211178389294,0.351742488719241,0,0.535701835878287,0,0,0,5.76565406057152,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0,0.865253124247578,0.252332849670158,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p14@PAPPA | |||
}} |
Revision as of 03:02, 23 January 2014
Short description: | p14@PAPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_14_at_PAPPA_5end |
Coexpression cluster: | C776_chorionic_placenta_Smooth_Aortic_Fibroblast_leiomyoma_mesothelioma |
Association with transcript: | -193bp_to_AY140907_5end |
EntrezGene: | PAPPA |
HGNC: | 8602 |
UniProt: | Q8IWT8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.67e-16 | 3 |
vascular associated smooth muscle cell | 1.30e-13 | 32 |
aortic smooth muscle cell | 9.41e-13 | 10 |
smooth muscle cell | 1.22e-11 | 43 |
smooth muscle myoblast | 1.22e-11 | 43 |
cardiac mesenchymal cell | 2.19e-11 | 4 |
migratory trunk neural crest cell | 2.19e-11 | 4 |
smooth muscle cell of the subclavian artery | 3.34e-09 | 5 |
muscle cell | 1.24e-08 | 55 |
muscle precursor cell | 4.47e-08 | 58 |
myoblast | 4.47e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.47e-08 | 58 |
receptor cell | 7.31e-08 | 6 |
sensory epithelial cell | 7.31e-08 | 6 |
olfactory epithelial cell | 7.31e-08 | 6 |
electrically responsive cell | 1.41e-07 | 61 |
electrically active cell | 1.41e-07 | 61 |