FFCP PHASE1:Hg19::chrX:12993121..12993132,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7117 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11885 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-92bp_to_uc004cvf.2_5end | |||
|description=CAGE_peak_5_at_TMSL3_5end | |||
|id=chrX:12993121..12993132,+ | |||
|ontology_enrichment_celltype=CL:0000144!1.61e-13!625;CL:0002371!1.79e-13!591;CL:0000003!5.42e-12!722;CL:0000012!4.14e-10!682;CL:0000548!8.59e-10!679;CL:0000004!8.59e-10!679;CL:0000255!8.59e-10!679;CL:0000034!3.59e-09!444;CL:0000048!9.92e-09!430;CL:0000723!4.42e-08!436;CL:0000183!6.13e-08!59;CL:0000393!3.70e-07!60;CL:0000211!3.70e-07!60;CL:0000680!6.73e-07!57;CL:0000056!6.73e-07!57;CL:0000355!6.73e-07!57;CL:0000055!9.54e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000128;8.08e-09;7!CL:0000126;8.08e-09;7!CL:0000127;8.08e-09;7!CL:0002605;8.36e-09;3!CL:0000064;3.01e-08;3!CL:0000067;3.01e-08;3!CL:0005012;3.01e-08;3!CL:0002304;3.01e-08;3!CL:0002504;8.70e-08;3!CL:1000279;8.70e-08;3!CL:1000280;8.70e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,8.67e-09,3;CL:0000128,1.00e-08,7;CL:0000126,1.00e-08,7;CL:0000127,1.00e-08,7;CL:0002453,1.00e-08,7;CL:0000064,1.90e-08,3;CL:0000067,1.90e-08,3;CL:0005012,1.90e-08,3;CL:0002304,1.90e-08,3;CL:0002504,1.93e-07,3;CL:1000279,1.93e-07,3;CL:1000280,1.93e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.36e-08!83;UBERON:0002329!5.36e-08!83;UBERON:0003077!5.36e-08!83;UBERON:0003059!5.36e-08!83;UBERON:0007282!5.36e-08!83;UBERON:0009618!5.36e-08!83;UBERON:0007285!5.36e-08!83;UBERON:0004290!2.70e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;3.90e-10;4!UBERON:0002203;6.14e-10;6!UBERON:0001768;6.14e-10;6!UBERON:0002200;6.14e-10;6!UBERON:0001778;3.01e-08;3!UBERON:0001775;3.01e-08;3!UBERON:0006876;3.32e-07;11!UBERON:0001473;4.54e-07;8!UBERON:0004536;4.54e-07;8!UBERON:0006558;4.54e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,3.38e-10,4;UBERON:0002203,8.11e-10,6;UBERON:0001768,8.11e-10,6;UBERON:0002200,8.11e-10,6;UBERON:0001778,1.90e-08,3;UBERON:0001775,1.90e-08,3;UBERON:0001473,4.23e-07,8;UBERON:0004536,4.23e-07,8;UBERON:0006558,4.23e-07,8;UBERON:0006876,4.77e-07,11 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,2.53299878168311,0.631719873426831,0.261185628199839,1.22866968250754,0.697801167972428,0,0,0.495065411840187,0.662794751455832,0.672325146451775,0.602694528023977,0.730310090387373,1.95173119516203,1.23121058076788,0,1.25381888591235,3.14859585844162,2.73748850145768,2.25976751270645,1.91033514369878,1.14940825229924,1.73163718890094,0,0,0,0,0.30120591877825,0,0.0774672005803016,0.284338464974843,0.587200878669695,0.553995408531877,0,0.217010870715852,0.447830948479849,0.32389366601898,0,0.145398238779565,0.377875943688809,0.242584061187816,0,0.822335776043652,0,0,0.256160706529101,0,0,0.645484683583826,0,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0,0.855038231223746,0.19891667719909,0,0,1.09227722252426,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0.526768169550154,0,0.786021525498329,0.616804496998528,0.167186495390678,0,0.473447805734733,0,0.668462741311041,0.589211814949674,0.886135578334485,0.812411591295047,0.512365278902701,0.390178042679635,1.15106533222573,0.552700035571697,0,0,1.07016331235885,0,0.679856056185397,0.766440987203842,1.71813722741315,0.506039384039006,0.637130828648193,0,0,0.451725357233318,0.127986611154418,0,0.236777252044017,0.821127996921047,0.403213486449465,0.267440195783507,0,0,0.670700859703636,0.12786256184353,0,0.50133791063589,0.289693037921647,0,0,1.60709189178915,2.4390233720882,2.0202000709419,0.0654895377488563,0.728590576585084,0.370784442784429,0,0.174129737299267,0.398873881556595,0,0,0,0.39752481473341,0,0,0.56530794192401,0,0.550236083880135,0.835979866147242,2.06733407335463,0.71153252537342,1.33888245105868,0.402829317109147,0.760272105718513,0.24406205754817,0.367663080345869,0,0.17859945656816,0.22452937262617,0.337834441449967,1.53316637465883,0,0,0,0,0,0,0.886413581652058,0,0.860509862246441,0.354668382198357,0,0,0.74000264525148,0,0.538842688278752,0.980771418680752,0.454072282934794,1.15235184896,0.234321431833797,0.936480230490962,0.570471821544449,1.04614076386261,0.469737994575059,0.161872944368132,0.280901613404497,0,0.61417158655884,0.103325781175765,2.37600571456411,0.494533858557114,0,1.43723628363248,0,0,0.277064115484183,0.438977620880838,0.612975591598039,0.300476117813194,0.680593098960126,0.179389635688862,0.213557388818567,0,0.300091096084402,0.206105058476878,0.257640540045629,0.18611685633159,0,0.876933046450788,0.252433774244115,0.552299391853796,0.484938170456436,0.355009592516614,1.0075209822764,0.847802961552438,0,0.545492241181669,0.286804595389004,1.21973706129595,0.397589304964456,0.464775771478074,0.829288440122964,0.504641701751257,0.36497735907583,1.56449532329816,0,1.38134921352481,0.464367928031979,0.721879481669586,0.118306800039844,0.505754070234305,0.241011029883482,0.110293972732394,0.435758888184812,0.237270619111097,0.404493924480493,0.392442930250692,0,0.738155454624648,0,1.2347220339942,0,0,0,0.590789906681404,0.882926198829301,0,1.20097467208968,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,2.88662684050547,0.811512834825538,0.587043471179108,1.15493158208859,1.38895653772983,0.380508304469197,0,0.858486162094873,0,0.468008530278475,1.48631162288728,1.87467667973554,0.671928512795438,0.141775097242386,0,0,0,0.492663237895943,0.264145302039678,0,0,0,0,0,0,0,0,0.300343057843917,0,1.12131084345361,1.74384027533312,0.7333828582095,0.517086863031111,0,0,2.39344304926383,0,1.54324424557285,0,1.0656887160644,0.428933980974443,0,0.823240336780769,0.977208552881205,0,1.58390374586686,0,0.871533458600294,0.99972991182057,0,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0.61642896765115,0.358121926479791,0.896681151948218,0,0.215627574859517,0,0.508189248444927,0,1.54657762555539,0.837581326671744,1.27587750330633,0.749007023947182,0,0,0.12269149171914,1.50051156317903,2.17012018959788,0.207970861530807,0.535286966391485,0.473107245101804,0.234282829985426,0,0,0,1.32845119707087,1.65932251687533,0.521301686808497,0.391602314925481,1.02943027143257,0.206768026122887,0,0,0.303127571446259,1.66435439510497,0.30239029332968,0,0.306923946576125,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0.410635780069046,0,0.232420756919918,0,0.40101294060657,0,0.574072240823034,0.728364672026868,0.131124414959424,0,0.308061348417659,0,0,0.422206515571503,0,0.680374821106063,0.215915916102139,0,0.541892875087706,1.00337954770971,0.254876273045038,0,0.671624264166535,0,0,0,0,0.325378394664303,0,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,1.7400729292582,1.84858340537573,1.5350367472613,0.964856007391714,0.966782203814463,1.16013355131383,0.767039646744908,0.534192213880424,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0.9266210955196,0.143124886741991,0.372158369359667,0.949138274156178,0.38126038784765,2.81487570442467,0.42793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| |||
|short_description=p5@TMSL3 | |||
}} |
Revision as of 04:50, 23 January 2014
Short description: | p5@TMSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TMSL3_5end |
Coexpression cluster: | NA |
Association with transcript: | -92bp_to_uc004cvf.2_5end |
EntrezGene: | TMSL3 |
HGNC: | 11885 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 8.67e-09 | 3 |
oligodendrocyte | 1.00e-08 | 7 |
macroglial cell | 1.00e-08 | 7 |
astrocyte | 1.00e-08 | 7 |
oligodendrocyte precursor cell | 1.00e-08 | 7 |
ciliated cell | 1.90e-08 | 3 |
ciliated epithelial cell | 1.90e-08 | 3 |
multi-ciliated epithelial cell | 1.90e-08 | 3 |
non-pigmented ciliary epithelial cell | 1.90e-08 | 3 |
enteric smooth muscle cell | 1.93e-07 | 3 |
smooth muscle cell of large intestine | 1.93e-07 | 3 |
smooth muscle cell of colon | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 3.38e-10 | 4 |
vasculature of eye | 8.11e-10 | 6 |
uvea | 8.11e-10 | 6 |
vasculature of head | 8.11e-10 | 6 |
ciliary epithelium | 1.90e-08 | 3 |
ciliary body | 1.90e-08 | 3 |
lymphatic vessel | 4.23e-07 | 8 |
lymph vasculature | 4.23e-07 | 8 |
lymphatic part of lymphoid system | 4.23e-07 | 8 |
vasculature of organ | 4.77e-07 | 11 |