FFCP PHASE1:Hg19::chrX:154299753..154299807,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79184 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24185 | |||
|TSSclassifier=strong | |||
|UniProt=P46736,C9J8X9 | |||
|association_with_transcript=0bp_to_ENST00000369459,ENST00000369462,ENST00000399042,ENST00000411985,ENST00000453705,ENST00000457026_5end | |||
|description=CAGE_peak_1_at_BRCC3_5end | |||
|id=chrX:154299753..154299807,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.95e-08;29 | |||
|ontology_enrichment_disease=DOID:162!2.73e-34!235;DOID:14566!1.35e-33!239;DOID:305!8.66e-25!106;DOID:0050687!1.95e-24!143;DOID:0050686!7.12e-15!137;DOID:2531!2.19e-07!51;DOID:0060083!2.19e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:305;1.83e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.84e-34,235;DOID:14566,1.40e-33,239;DOID:305,8.65e-25,106;DOID:0050687,2.03e-24,143;DOID:0050686,7.20e-15,137;DOID:2531,2.19e-07,51;DOID:0060083,2.19e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001007!7.13e-09!155;UBERON:0001555!7.13e-09!155;UBERON:0007026!7.13e-09!155;UBERON:0004119!4.80e-07!169;UBERON:0000925!4.80e-07!169;UBERON:0006595!4.80e-07!169;UBERON:0001737!6.58e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.87e-07;9!UBERON:0001557;5.87e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,4.14e-09,145;UBERON:0001555,4.14e-09,145;UBERON:0007026,4.14e-09,145;UBERON:0011216,5.73e-09,223;UBERON:0004119,5.93e-07,160;UBERON:0000925,5.93e-07,160;UBERON:0006595,5.93e-07,160;UBERON:0001737,6.58e-07,9 | |||
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| |||
|short_description=p1@BRCC3 | |||
}} |
Revision as of 07:37, 23 January 2014
Short description: | p1@BRCC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BRCC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000369459, ENST00000369462, ENST00000399042, ENST00000411985, ENST00000453705, ENST00000457026_5end |
EntrezGene: | BRCC3 |
HGNC: | 24185 |
UniProt: | P46736C9J8X9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 4.14e-09 | 145 |
digestive tract | 4.14e-09 | 145 |
primitive gut | 4.14e-09 | 145 |
organ system subdivision | 5.73e-09 | 223 |
endoderm-derived structure | 5.93e-07 | 160 |
endoderm | 5.93e-07 | 160 |
presumptive endoderm | 5.93e-07 | 160 |
larynx | 6.58e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.84e-34 | 235 |
disease of cellular proliferation | 1.40e-33 | 239 |
carcinoma | 8.65e-25 | 106 |
cell type cancer | 2.03e-24 | 143 |
organ system cancer | 7.20e-15 | 137 |
hematologic cancer | 2.19e-07 | 51 |
immune system cancer | 2.19e-07 | 51 |