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|has_quality=
|has_quality=
|id=UBERON:0001255
|id=UBERON:0001255
|is_a=UBERON:0000077;;UBERON:0000489;;UBERON:0002075;;UBERON:0006554
|is_a=UBERON:0000489 ;;UBERON:0002075 ;;UBERON:0004120 ;;UBERON:0006554  
|is_obsolete=
|is_obsolete=
|located_in=
|located_in=
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|namespace=
|namespace=
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0001556;;UBERON:0002323
|part_of=UBERON:0001556
|preceded_by=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Anatomical structure which consists of a membranous sac used to temporarily store urine until it is excreted from the body.[AAO]" xsd:string
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Anatomical structure which consists of a membranous sac used to temporarily store urine until it is excreted from the body.[AAO]" xsd:string

Revision as of 11:02, 12 September 2014

Name:urinary bladder
Definition:"Organ with organ cavity which is continuous proximally with the right and left ureters and distally with the urethra." [FMA:15900, Wikipedia:Urinary_bladder]
Xrefs:
links:

AAO:0000623
BTO:0001418
EFO:0000290
EHDAA2:0000174
EHDAA:9328
EMAPA:18321
EV:0100098
FMA:15900
GAID:0000004
galen:UrinaryBladder
[1]
[ 200px-Urinary_system.svg.png 200px-Urinary_system.svg.png]
MA:0000380
MAT:0000122
MESH:A.05.810.161
MIAA:0000122
ncithesaurus:Bladder
OpenCyc:Mx4rvVjMmZwpEbGdrcN5Y29ycA
SCTID:302512001
VHOG:0000740

XAO:0000154
Synonyms: "bladder" EXACT []
"excretory canal" BROAD []
"vesica urinaria" RELATED LATIN [Wikipedia:Urinary_bladder]
Comments:editor note: consider adding a 'bladder' grouping class
Alt_id: UBERON:FMA_15900-FMA_7203-MA_0000368-MA_0000380-MIAA_0000118-MIAA_0000119-MIAA_0000122-WBbt_0005775-XAO_0000154-ZFA_0000529
Subset: major_organ
organ_slim
uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000489(cavitated compound organ),UBERON:0002075(viscus),UBERON:0004120(mesoderm-derived structure),UBERON:0006554(urinary system structure)
develops_from:UBERON:0000164(primitive urogenital sinus)
part_of:UBERON:0001556(lower urinary tract)



Children

derives from:FF:0010011 (human bladder - adult sample),FF:0011437 (mouse urinary bladder- adult sample)
part of:UBERON:0001256 (wall of urinary bladder),UBERON:0001259 (mucosa of urinary bladder),CL:0002597 (smooth muscle cell of bladder),UBERON:0004645 (urinary bladder urothelium),CL:1001319 (bladder cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001255 (urinary bladder), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data











Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical structure which consists of a membranous sac used to temporarily store urine until it is excreted from the body.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.