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{{UBERON
{{UBERON
|id=UBERON:0004647
|alt_id=
|name=liver lobule
|namespace=
|def=
|xref=FMA:14471;;MA:0002494;;ncithesaurus:Hepatic_Lobule;;SCTID:362194004
|is_a=UBERON:0000064;;UBERON:0000077
|synonym="hepatic lobule" EXACT [FMA:14471];;"lobulus hepaticus" EXACT [FMA:14471]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004647
|is_a=UBERON:0000064 ;;UBERON:0004119
|is_obsolete=
|located_in=
|located_in=
|name=liver lobule
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001280
|part_of=UBERON:0001280
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=
|synonym="hepatic lobule" EXACT [FMA:14471];;"lobulus hepaticus" EXACT [FMA:14471]
|union_of=
|xref=FMA:14471;;MA:0002494;;ncithesaurus:Hepatic_Lobule;;SCTID:362194004
}}
}}

Latest revision as of 17:46, 12 September 2014

Name:liver lobule
Namespace:FANTOM
Xrefs:
links:

FMA:14471
MA:0002494
ncithesaurus:Hepatic_Lobule

SCTID:362194004
Synonyms: "hepatic lobule" EXACT [FMA:14471]
"lobulus hepaticus" EXACT [FMA:14471]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000064(organ part),UBERON:0004119(endoderm-derived structure)
part_of:UBERON:0001280(liver parenchyma)



Children

part of:UBERON:0001172 (hepatic acinus),UBERON:0001281 (hepatic sinusoid),UBERON:0001282 (intralobular bile duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004647 (liver lobule), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.74e-88FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_21bc846de0d4754dec7b345e1a836463p2@ENST00000448698
9.74e-88FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_21bc846de0d4754dec7b345e1a836463p2@ENST00000448698
3.07e-86FFCP PHASE1:Mm9::chr2:129407463..129407468,-#_d467f18b3a526e740a80ed85ff1ec551p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE2:Mm9::chr11:117829935..117829959,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:117829935..117829959, -
3.07e-86FFCP PHASE2:Mm9::chr12:87046930..87046933,+#_d467f18b3a526e740a80ed85ff1ec551p@chr12:87046930..87046933, +
3.07e-86FFCP PHASE2:Mm9::chr10:93942324..93942342,-#_d467f18b3a526e740a80ed85ff1ec551p@chr10:93942324..93942342, -
3.07e-86FFCP PHASE2:Mm9::chr11:119254092..119254100,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE1:Mm9::chr11:48685851..48685860,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:48685851..48685860, -
3.07e-86FFCP PHASE1:Mm9::chr18:47491114..47491123,+#_d467f18b3a526e740a80ed85ff1ec551p@chr18:47491114..47491123, +
3.07e-86FFCP PHASE1:Mm9::chr10:93499468..93499494,-#_d467f18b3a526e740a80ed85ff1ec551p@chr10:93499468..93499494, -
3.07e-86FFCP PHASE2:Mm9::chr13:113550715..113550722,-#_d467f18b3a526e740a80ed85ff1ec551p@chr13:113550715..113550722, -
3.07e-86FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:138241693..138241697, +
3.07e-86FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_d467f18b3a526e740a80ed85ff1ec551p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE2:Mm9::chr10:21389022..21389032,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:21389022..21389032, +
3.07e-86FFCP PHASE2:Mm9::chr10:85587155..85587188,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:85587155..85587188, +
3.07e-86FFCP PHASE2:Mm9::chr4:100890388..100890423,+#_d467f18b3a526e740a80ed85ff1ec551p@chr4:100890388..100890423, +
3.07e-86FFCP PHASE1:Mm9::chr12:88237840..88237851,-#_d467f18b3a526e740a80ed85ff1ec551p@chr12:88237840..88237851, -
3.07e-86FFCP PHASE1:Mm9::chr10:85585991..85586025,-#_d467f18b3a526e740a80ed85ff1ec551p@chr10:85585991..85586025, -
3.07e-86FFCP PHASE1:Mm9::chr17:34796428..34796430,-#_d467f18b3a526e740a80ed85ff1ec551p@chr17:34796428..34796430, -
3.07e-86FFCP PHASE2:Mm9::chr17:35106749..35106752,-#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35106749..35106752, -
3.07e-86FFCP PHASE2:Mm9::chr2:169549462..169549477,+#_d467f18b3a526e740a80ed85ff1ec551p@chr2:169549462..169549477, +
3.07e-86FFCP PHASE1:Mm9::chr17:48822294..48822295,-#_d467f18b3a526e740a80ed85ff1ec551p@chr17:48822294..48822295, -
3.07e-86FFCP PHASE2:Mm9::chr12:88237840..88237851,-#_d467f18b3a526e740a80ed85ff1ec551p@chr12:88237840..88237851, -
3.07e-86FFCP PHASE2:Mm9::chr6:15678147..15678149,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_d467f18b3a526e740a80ed85ff1ec551p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:51831254..51831256, -
3.07e-86FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_d467f18b3a526e740a80ed85ff1ec551p@chr5:64344878..64344887, -
3.07e-86FFCP PHASE2:Mm9::chr2:129407463..129407468,-#_d467f18b3a526e740a80ed85ff1ec551p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE1:Mm9::chr16:30944451..30944485,+#_d467f18b3a526e740a80ed85ff1ec551p@chr16:30944451..30944485, +
3.07e-86FFCP PHASE1:Mm9::chr8:87745380..87745385,+#_d467f18b3a526e740a80ed85ff1ec551p@chr8:87745380..87745385, +
3.07e-86FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_d467f18b3a526e740a80ed85ff1ec551p@chr11:115280630..115280662, +
3.07e-86FFCP PHASE2:Mm9::chr6:91441074..91441080,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:91441074..91441080, -
3.07e-86FFCP PHASE1:Mm9::chr12:86691575..86691580,-#_d467f18b3a526e740a80ed85ff1ec551p@chr12:86691575..86691580, -
3.07e-86FFCP PHASE2:Mm9::chr4:141645056..141645068,+#_d467f18b3a526e740a80ed85ff1ec551p@chr4:141645056..141645068, +
3.07e-86FFCP PHASE2:Mm9::chr9:116223548..116223551,+#_d467f18b3a526e740a80ed85ff1ec551p@chr9:116223548..116223551, +
3.07e-86FFCP PHASE1:Mm9::chr17:28107053..28107062,-#_d467f18b3a526e740a80ed85ff1ec551p@chr17:28107053..28107062, -
3.07e-86FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_d467f18b3a526e740a80ed85ff1ec551p@chr12:86691530..86691535, -
3.07e-86FFCP PHASE1:Mm9::chr8:3311867..3311873,+#_d467f18b3a526e740a80ed85ff1ec551p@chr8:3311867..3311873, +
3.07e-86FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_d467f18b3a526e740a80ed85ff1ec551p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:94580525..94580530, +
3.07e-86FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35093377..35093381, +
3.07e-86FFCP PHASE1:Mm9::chr17:35093764..35093773,-#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35093764..35093773, -
3.07e-86FFCP PHASE1:Mm9::chr8:86713876..86713879,+#_d467f18b3a526e740a80ed85ff1ec551p@chr8:86713876..86713879, +
3.07e-86FFCP PHASE2:Mm9::chr3:90270007..90270012,+#_d467f18b3a526e740a80ed85ff1ec551p@chr3:90270007..90270012, +
3.07e-86FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_d467f18b3a526e740a80ed85ff1ec551p@chr12:8400090..8400093, +
3.07e-86FFCP PHASE1:Mm9::chr15:82209805..82209851,+#_d467f18b3a526e740a80ed85ff1ec551p@chr15:82209805..82209851, +
3.07e-86FFCP PHASE1:Mm9::chr11:88890706..88890745,+#_d467f18b3a526e740a80ed85ff1ec551p@chr11:88890706..88890745, +
3.07e-86FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_d467f18b3a526e740a80ed85ff1ec551p4@Pag1
3.07e-86FFCP PHASE1:Mm9::chr18:4336287..4336296,-#_d467f18b3a526e740a80ed85ff1ec551p8@Map3k8
3.07e-86FFCP PHASE1:Mm9::chr13:100000226..100000230,+#_d467f18b3a526e740a80ed85ff1ec551p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr10:8586393..8586401,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:8586393..8586401, +
3.07e-86FFCP PHASE1:Mm9::chr9:42915101..42915106,-#_d467f18b3a526e740a80ed85ff1ec551p@chr9:42915101..42915106, -
3.07e-86FFCP PHASE2:Mm9::chr1:186559285..186559288,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:186559285..186559288, +
3.07e-86FFCP PHASE2:Mm9::chr10:85585949..85585969,-#_d467f18b3a526e740a80ed85ff1ec551p@chr10:85585949..85585969, -
3.07e-86FFCP PHASE1:Mm9::chr18:35900327..35900366,+#_d467f18b3a526e740a80ed85ff1ec551p@chr18:35900327..35900366, +
3.07e-86FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_d467f18b3a526e740a80ed85ff1ec551p@chr5:75375903..75375931, +
3.07e-86FFCP PHASE1:Mm9::chr16:11009028..11009039,+#_d467f18b3a526e740a80ed85ff1ec551p4@Gm4262
3.07e-86FFCP PHASE1:Mm9::chr7:52781901..52781904,+#_d467f18b3a526e740a80ed85ff1ec551p@chr7:52781901..52781904, +
3.07e-86FFCP PHASE1:Mm9::chr16:85801525..85801529,-#_d467f18b3a526e740a80ed85ff1ec551p6@Adamts1
3.07e-86FFCP PHASE2:Mm9::chr16:85801525..85801529,-#_d467f18b3a526e740a80ed85ff1ec551p6@Adamts1
3.07e-86FFCP PHASE1:Mm9::chr8:114123814..114123821,-#_d467f18b3a526e740a80ed85ff1ec551p@chr8:114123814..114123821, -
3.07e-86FFCP PHASE2:Mm9::chr15:82193340..82193343,+#_d467f18b3a526e740a80ed85ff1ec551p@chr15:82193340..82193343, +
3.07e-86FFCP PHASE2:Mm9::chr9:42915220..42915225,-#_d467f18b3a526e740a80ed85ff1ec551p@chr9:42915220..42915225, -
3.07e-86FFCP PHASE2:Mm9::chr1:66883923..66883955,-#_d467f18b3a526e740a80ed85ff1ec551p@chr1:66883923..66883955, -
3.07e-86FFCP PHASE2:Mm9::chr13:100000226..100000230,+#_d467f18b3a526e740a80ed85ff1ec551p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr9:62199266..62199267,+#_d467f18b3a526e740a80ed85ff1ec551p@chr9:62199266..62199267, +
3.07e-86FFCP PHASE1:Mm9::chr17:35106363..35106372,-#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35106363..35106372, -
3.07e-86FFCP PHASE1:Mm9::chr11:109223756..109223764,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE2:Mm9::chr18:35881716..35881727,-#_d467f18b3a526e740a80ed85ff1ec551p@chr18:35881716..35881727, -
3.07e-86FFCP PHASE2:Mm9::chr2:84756280..84756286,+#_d467f18b3a526e740a80ed85ff1ec551p@chr2:84756280..84756286, +
3.07e-86FFCP PHASE1:Mm9::chr6:48398664..48398684,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:48398664..48398684, -
3.07e-86FFCP PHASE1:Mm9::chr15:88669906..88669914,+#_d467f18b3a526e740a80ed85ff1ec551p@chr15:88669906..88669914, +
3.07e-86FFCP PHASE2:Mm9::chr17:12388232..12388237,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:12388232..12388237, +
3.07e-86FFCP PHASE1:Mm9::chr9:45920408..45920437,-#_d467f18b3a526e740a80ed85ff1ec551p@chr9:45920408..45920437, -
3.07e-86FFCP PHASE1:Mm9::chr1:137570295..137570315,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:137570295..137570315, +
3.07e-86FFCP PHASE1:Mm9::chr18:5125608..5125613,+#_d467f18b3a526e740a80ed85ff1ec551p@chr18:5125608..5125613, +
3.07e-86FFCP PHASE1:Mm9::chr10:93819538..93819549,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:93819538..93819549, +
3.07e-86FFCP PHASE2:Mm9::chr15:88669906..88669914,+#_d467f18b3a526e740a80ed85ff1ec551p@chr15:88669906..88669914, +
3.07e-86FFCP PHASE2:Mm9::chr15:59435855..59435878,-#_d467f18b3a526e740a80ed85ff1ec551p@chr15:59435855..59435878, -
3.07e-86FFCP PHASE2:Mm9::chr9:45920408..45920437,-#_d467f18b3a526e740a80ed85ff1ec551p@chr9:45920408..45920437, -
3.07e-86FFCP PHASE2:Mm9::chr16:30944451..30944485,+#_d467f18b3a526e740a80ed85ff1ec551p@chr16:30944451..30944485, +
3.07e-86FFCP PHASE1:Mm9::chr17:67870501..67870507,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:67870501..67870507, +
3.07e-86FFCP PHASE1:Mm9::chr12:81955014..81955018,+#_d467f18b3a526e740a80ed85ff1ec551p@chr12:81955014..81955018, +
3.07e-86FFCP PHASE1:Mm9::chr9:116223548..116223551,+#_d467f18b3a526e740a80ed85ff1ec551p@chr9:116223548..116223551, +
3.07e-86FFCP PHASE1:Mm9::chr11:119254092..119254100,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE1:Mm9::chr10:85586219..85586227,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:85586219..85586227, +
3.07e-86FFCP PHASE1:Mm9::chr17:34798555..34798562,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:34798555..34798562, +
3.07e-86FFCP PHASE1:Mm9::chr7:118133901..118133904,-#_d467f18b3a526e740a80ed85ff1ec551p@chr7:118133901..118133904, -
3.07e-86FFCP PHASE1:Mm9::chr6:15678147..15678149,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE1:Mm9::chr16:91441786..91441787,-#_d467f18b3a526e740a80ed85ff1ec551p@chr16:91441786..91441787, -
3.07e-86FFCP PHASE1:Mm9::chr11:117737077..117737096,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:117737077..117737096, -
3.07e-86FFCP PHASE2:Mm9::chr11:109223779..109223789,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:109223779..109223789, -
3.07e-86FFCP PHASE2:Mm9::chr6:34549876..34549892,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:34549876..34549892, -
3.07e-86FFCP PHASE2:Mm9::chr15:32178407..32178408,-#_d467f18b3a526e740a80ed85ff1ec551p@chr15:32178407..32178408, -
3.07e-86FFCP PHASE1:Mm9::chr7:109031260..109031268,+#_d467f18b3a526e740a80ed85ff1ec551p@chr7:109031260..109031268, +
3.07e-86FFCP PHASE1:Mm9::chr17:35945332..35945335,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35945332..35945335, +
3.07e-86FFCP PHASE2:Mm9::chr17:48822294..48822295,-#_d467f18b3a526e740a80ed85ff1ec551p@chr17:48822294..48822295, -
3.07e-86FFCP PHASE2:Mm9::chr17:28107053..28107062,-#_d467f18b3a526e740a80ed85ff1ec551p@chr17:28107053..28107062, -
3.07e-86FFCP PHASE2:Mm9::chr2:133323630..133323631,+#_d467f18b3a526e740a80ed85ff1ec551p@chr2:133323630..133323631, +

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