UBERON:0009955: Difference between revisions
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|name=neurogenic placode | |name=neurogenic placode | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 18:07, 12 September 2014
| Name: | neurogenic placode | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Cranial placode with neurogenic potential[cjm]. Neurogenic placodes are transient ectodermal thickenings that form at the border of the neural plate and epidermis and give rise to sensory neurons of the cranial ganglia[ZFA]. The neurogenic placodes give rise to parts of various nerves and ganglia, the olfactory organ, parietal eye, parts of the inner ear, and the lateral line. There are 2 major series of neurogenic placodes, the dorsolateral and ventrolateral or epibranchial[PMID]" [PMID:11523831, Wikipedia:Neurogenic_placodes, ZFA:0001309] | ||
| Xrefs: |
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| Synonyms: |
"neurogenic placodes" EXACT PLURAL [ZFA:0001309] "placodae neurogenicae" RELATED LATIN [Wikipedia:Neurogenic_placodes] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002546(cranial placode) |
|---|
Children
| is a: | UBERON:0003050 (olfactory placode),UBERON:0003067 (dorsolateral placode) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009955 (neurogenic placode), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr1:172843813..172843834, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr1:182528371..182528385, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr14:31283085..31283097, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr10:67371994..67372010, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr4:130461150..130461185, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr6:113251614..113251623, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr19:10536767..10536777, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr17:13983102..13983126, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr3:100724698..100724706, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_3a60b0cd6868b4b766bca2e34977f532 | p11@Tsga14 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr15:103146966..103146971, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr19:10536797..10536802, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr9:56208792..56208814, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_3a60b0cd6868b4b766bca2e34977f532 | p1@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr19:55256373..55256384, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_3a60b0cd6868b4b766bca2e34977f532 | p4@uc007rhb.1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr16:93971325..93971337, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr3:35012425..35012439, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_3a60b0cd6868b4b766bca2e34977f532 | p1@Kncn |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr17:13983160..13983167, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207887..42207960,-#_3a60b0cd6868b4b766bca2e34977f532 | p1@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr1:93235253..93235264, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr9:42206745..42206774, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_3a60b0cd6868b4b766bca2e34977f532 | p1@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_3a60b0cd6868b4b766bca2e34977f532 | p1@Kcna10 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:35012397..35012405,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr3:35012397..35012405, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr15:89215306..89215315, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_3a60b0cd6868b4b766bca2e34977f532 | p5@BC030867 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr2:128881546..128881553, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_3a60b0cd6868b4b766bca2e34977f532 | p10@Otof |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_3a60b0cd6868b4b766bca2e34977f532 | p21@Espn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42206745..42206774,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr9:42206745..42206774, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:67011921..67011934,+#_3a60b0cd6868b4b766bca2e34977f532 | p2@Gm1322 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr14:63099970..63099980, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_3a60b0cd6868b4b766bca2e34977f532 | p1@Espnl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_3a60b0cd6868b4b766bca2e34977f532 | p1@Tmprss3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr18:42158627..42158630, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr9:66860888..66860899, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78257491..78257498,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr13:78257491..78257498, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:109052297..109052300,-#_3a60b0cd6868b4b766bca2e34977f532 | p2@Tomt |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr12:109905468..109905474, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr2:152453066..152453075, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr14:47293487..47293493, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr12:13508046..13508055, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr5:150945209..150945220, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr3:154693281..154693317, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_3a60b0cd6868b4b766bca2e34977f532 | p10@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:128881546..128881553,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr2:128881546..128881553, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_3a60b0cd6868b4b766bca2e34977f532 | p3@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chrX:154140800..154140810, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:81012915..81012923,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr3:81012915..81012923, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr7:133957514..133957529, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr4:63079735..63079745, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr5:147854240..147854249, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_3a60b0cd6868b4b766bca2e34977f532 | p3@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr18:81314626..81314636, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_3a60b0cd6868b4b766bca2e34977f532 | p2@Tmprss3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr14:47293496..47293510, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_3a60b0cd6868b4b766bca2e34977f532 | p10@Tecta |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr6:86746562..86746579, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_3a60b0cd6868b4b766bca2e34977f532 | p5@Fer1l6 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_3a60b0cd6868b4b766bca2e34977f532 | p7@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:76964459..76964469,+#_3a60b0cd6868b4b766bca2e34977f532 | p15@Mctp1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr3:58626291..58626298, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr11:8405038..8405048, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_3a60b0cd6868b4b766bca2e34977f532 | p7@Glt25d2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr5:3909310..3909321, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_3a60b0cd6868b4b766bca2e34977f532 | p3@Kncn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_3a60b0cd6868b4b766bca2e34977f532 | p1@Tmprss7 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr12:77084875..77084885, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr8:13414266..13414279, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr2:53464168..53464175, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr5:72652660..72652667, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr11:89702580..89702593, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207777..42207789,-#_3a60b0cd6868b4b766bca2e34977f532 | p7@Tecta |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_3a60b0cd6868b4b766bca2e34977f532 | p6@Jag1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:4140290..4140321,+#_3a60b0cd6868b4b766bca2e34977f532 | p2@Gpr152 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr11:114603036..114603048, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr16:93971325..93971337, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr12:13508046..13508055, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr1:43454162..43454170, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_3a60b0cd6868b4b766bca2e34977f532 | p6@Fam70b |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_3a60b0cd6868b4b766bca2e34977f532 | p2@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr17:27252925..27252939, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr13:37195838..37195870, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_3a60b0cd6868b4b766bca2e34977f532 | p9@Ankrd24 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr1:78523144..78523177, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_3a60b0cd6868b4b766bca2e34977f532 | p1@Otog |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr5:3909310..3909321, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:31283072..31283081,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr14:31283072..31283081, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr11:75421384..75421397, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr1:172843847..172843880, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr1:182528388..182528403, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_3a60b0cd6868b4b766bca2e34977f532 | p2@Gpr152 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:133802857..133802884,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr4:133802857..133802884, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr19:10536797..10536802, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr17:13983160..13983167, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_3a60b0cd6868b4b766bca2e34977f532 | p13@Tsga14 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr3:100724698..100724706, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr11:11599532..11599539, - |
