FFCP PHASE1:Hg19::chr10:111970440..111970448,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:111970440..111970448,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_at_chr10:111970440..111970448,- | |||
|id=chr10:111970440..111970448,- | |||
|ontology_enrichment_celltype=CL:0000842!1.10e-09!3;CL:0000224!2.36e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000624;2.57e-14;6!CL:0000815;1.82e-11;2!CL:0000792;1.82e-11;2!CL:0002677;1.82e-11;2!CL:0000898;4.52e-08;3!CL:0000226;6.56e-08;3!CL:0000842;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.04e-14,6;CL:0000815,1.82e-11,2;CL:0000792,1.82e-11,2;CL:0002677,1.82e-11,2;CL:0000898,4.52e-08,3;CL:0000226,6.78e-08,3;CL:0000842,6.78e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.22e-25!57;UBERON:0005068!8.22e-25!57;UBERON:0006241!8.22e-25!57;UBERON:0007135!8.22e-25!57;UBERON:0007023!3.40e-23!115;UBERON:0002780!7.47e-23!41;UBERON:0001890!7.47e-23!41;UBERON:0006240!7.47e-23!41;UBERON:0001893!1.35e-22!34;UBERON:0003080!3.38e-22!42;UBERON:0005743!9.84e-22!86;UBERON:0001017!1.74e-21!82;UBERON:0001869!2.80e-21!32;UBERON:0002791!8.16e-21!33;UBERON:0000073!1.25e-20!94;UBERON:0001016!1.25e-20!94;UBERON:0002020!8.31e-20!34;UBERON:0003528!8.31e-20!34;UBERON:0002616!1.17e-19!59;UBERON:0000955!4.52e-19!69;UBERON:0006238!4.52e-19!69;UBERON:0003075!6.99e-19!86;UBERON:0007284!6.99e-19!86;UBERON:0002619!1.71e-18!22;UBERON:0002346!9.95e-18!90;UBERON:0001950!2.12e-17!20;UBERON:0000956!5.31e-16!25;UBERON:0000203!5.31e-16!25;UBERON:0003056!2.60e-15!61;UBERON:0000153!4.51e-12!129;UBERON:0007811!4.51e-12!129;UBERON:0004121!5.93e-10!169;UBERON:0000033!6.46e-10!123;UBERON:0000924!1.50e-09!173;UBERON:0006601!1.50e-09!173;UBERON:0001871!6.22e-09!7;UBERON:0000200!2.05e-07!6;UBERON:0000369!2.41e-07!4;UBERON:0002435!2.41e-07!4;UBERON:0000204!2.41e-07!4;UBERON:0010082!2.41e-07!4;UBERON:0001873!7.62e-07!2;UBERON:0010122!7.62e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;4.66e-21;1!UBERON:0002135;4.66e-21;1!UBERON:0011215;4.66e-21;1!UBERON:0001018;4.66e-21;1!UBERON:0002473;4.66e-21;1!UBERON:0005340;4.66e-21;1!UBERON:0003544;4.66e-21;1!UBERON:0005970;4.66e-21;1!UBERON:0002316;4.66e-21;1!UBERON:0001020;4.66e-21;1!UBERON:0002437;4.66e-21;1!UBERON:0005162;3.18e-11;2!UBERON:0000122;3.18e-11;2!UBERON:0002133;3.18e-11;2!UBERON:0003978;6.56e-08;3!UBERON:0000946;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,6.31e-21,1;UBERON:0002336,9.43e-21,1;UBERON:0011215,9.43e-21,1;UBERON:0001018,9.43e-21,1;UBERON:0002473,9.43e-21,1;UBERON:0005340,9.43e-21,1;UBERON:0003544,9.43e-21,1;UBERON:0005970,9.43e-21,1;UBERON:0002316,9.43e-21,1;UBERON:0001020,9.43e-21,1;UBERON:0002437,9.43e-21,1;UBERON:0002133,3.70e-11,2;UBERON:0005162,4.52e-11,2;UBERON:0000122,4.52e-11,2;UBERON:0003978,7.26e-08,3;UBERON:0009751,7.26e-08,3;UBERON:0000946,7.26e-08,3;UBERON:0002523,7.26e-08,3;UBERON:0005983,7.26e-08,3;UBERON:0002165,7.26e-08,3;UBERON:0002062,7.26e-08,3;UBERON:0007280,7.26e-08,3 | |||
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| ||
|short_description=p@chr10:111970440..111970448,- | |||
}} | }} |
Latest revision as of 10:20, 23 July 2015
Short description: | p@chr10:111970440..111970448, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:111970440..111970448, - |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.04e-14 | 6 |
regulatory T cell | 1.82e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.82e-11 | 2 |
naive regulatory T cell | 1.82e-11 | 2 |
naive T cell | 4.52e-08 | 3 |
single nucleate cell | 6.78e-08 | 3 |
mononuclear cell | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mitral valve | 6.31e-21 | 1 |
corpus callosum | 9.43e-21 | 1 |
central nervous system cell part cluster | 9.43e-21 | 1 |
axon tract | 9.43e-21 | 1 |
intercerebral commissure | 9.43e-21 | 1 |
dorsal telencephalic commissure | 9.43e-21 | 1 |
brain white matter | 9.43e-21 | 1 |
brain commissure | 9.43e-21 | 1 |
white matter | 9.43e-21 | 1 |
nervous system commissure | 9.43e-21 | 1 |
cerebral hemisphere white matter | 9.43e-21 | 1 |
atrioventricular valve | 3.70e-11 | 2 |
multi cell component structure | 4.52e-11 | 2 |
neuron projection bundle | 4.52e-11 | 2 |
valve | 7.26e-08 | 3 |
cardiac mesenchyme | 7.26e-08 | 3 |
cardial valve | 7.26e-08 | 3 |
tunica intima | 7.26e-08 | 3 |
heart layer | 7.26e-08 | 3 |
endocardium | 7.26e-08 | 3 |
endocardial cushion | 7.26e-08 | 3 |
presumptive endocardium | 7.26e-08 | 3 |