FFCP PHASE1:Hg19::chr10:135347313..135347318,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:135347313..135347318,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr10:135347313..135347318,+ | |description=CAGE_peak_at_chr10:135347313..135347318,+ | ||
|id=chr10:135347313..135347318,+ | |id=chr10:135347313..135347318,+ | ||
|ontology_enrichment_celltype=CL:0000819!4.69e-19!1;CL:0000181!2.10e-14!12;CL:0000417!2.10e-14!12;CL:0000668!2.10e-14!12;CL:0000414!2.10e-14!12;CL:0000412!2.10e-14!12;CL:0000182!2.10e-14!12;CL:0000785!3.27e-10!2;CL:0000955!3.27e-10!2;CL:0000818!3.27e-10!2;CL:0000954!3.27e-10!2;CL:0000816!3.27e-10!2;CL:0000239!2.79e-07!3;CL:1000615!2.79e-07!3;CL:0002306!2.79e-07!3;CL:0000817!3.16e-07!3 | |ontology_enrichment_celltype=CL:0000819!4.69e-19!1;CL:0000181!2.10e-14!12;CL:0000417!2.10e-14!12;CL:0000668!2.10e-14!12;CL:0000414!2.10e-14!12;CL:0000412!2.10e-14!12;CL:0000182!2.10e-14!12;CL:0000785!3.27e-10!2;CL:0000955!3.27e-10!2;CL:0000818!3.27e-10!2;CL:0000954!3.27e-10!2;CL:0000816!3.27e-10!2;CL:0000239!2.79e-07!3;CL:1000615!2.79e-07!3;CL:0002306!2.79e-07!3;CL:0000817!3.16e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.47e-25;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.53e-25,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060073!4.69e-19!1;DOID:8675!4.69e-19!1 | |ontology_enrichment_disease=DOID:0060073!4.69e-19!1;DOID:8675!4.69e-19!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000998!2.71e-19!1;UBERON:0006868!2.71e-19!1;UBERON:0002107!8.80e-16!19;UBERON:0006925!8.80e-16!19;UBERON:0008836!8.80e-16!19;UBERON:0008835!1.11e-13!22;UBERON:0003894!1.11e-13!22;UBERON:0009854!4.20e-13!23;UBERON:0007499!4.40e-12!25;UBERON:0009497!4.40e-12!25;UBERON:0000015!4.40e-12!25;UBERON:0002423!4.40e-12!25;UBERON:0006235!4.40e-12!25;UBERON:0004161!4.40e-12!25;UBERON:0005172!8.79e-12!55;UBERON:0005173!8.79e-12!55;UBERON:0005057!1.25e-11!26;UBERON:0009856!1.25e-11!26;UBERON:0002417!1.31e-10!61;UBERON:0000916!1.31e-10!61;UBERON:0002365!8.32e-10!31;UBERON:0002330!8.32e-10!31;UBERON:0002368!1.02e-08!35;UBERON:0002530!8.22e-08!59;UBERON:0006947!2.63e-07!3;UBERON:0004054!2.63e-07!3;UBERON:0006853!2.79e-07!3;UBERON:0007685!2.79e-07!3;UBERON:0004134!2.79e-07!3;UBERON:0001723!2.97e-07!3;UBERON:0001033!2.97e-07!3;UBERON:0010056!2.97e-07!3;UBERON:0002771!3.35e-07!3;UBERON:0000949!7.76e-07!45 | |ontology_enrichment_uberon=UBERON:0000998!2.71e-19!1;UBERON:0006868!2.71e-19!1;UBERON:0002107!8.80e-16!19;UBERON:0006925!8.80e-16!19;UBERON:0008836!8.80e-16!19;UBERON:0008835!1.11e-13!22;UBERON:0003894!1.11e-13!22;UBERON:0009854!4.20e-13!23;UBERON:0007499!4.40e-12!25;UBERON:0009497!4.40e-12!25;UBERON:0000015!4.40e-12!25;UBERON:0002423!4.40e-12!25;UBERON:0006235!4.40e-12!25;UBERON:0004161!4.40e-12!25;UBERON:0005172!8.79e-12!55;UBERON:0005173!8.79e-12!55;UBERON:0005057!1.25e-11!26;UBERON:0009856!1.25e-11!26;UBERON:0002417!1.31e-10!61;UBERON:0000916!1.31e-10!61;UBERON:0002365!8.32e-10!31;UBERON:0002330!8.32e-10!31;UBERON:0002368!1.02e-08!35;UBERON:0002530!8.22e-08!59;UBERON:0006947!2.63e-07!3;UBERON:0004054!2.63e-07!3;UBERON:0006853!2.79e-07!3;UBERON:0007685!2.79e-07!3;UBERON:0004134!2.79e-07!3;UBERON:0001723!2.97e-07!3;UBERON:0001033!2.97e-07!3;UBERON:0010056!2.97e-07!3;UBERON:0002771!3.35e-07!3;UBERON:0000949!7.76e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.32e-28;19!UBERON:0006925;2.32e-28;19!UBERON:0002423;9.78e-22;25!UBERON:0002365;3.13e-18;31!UBERON:0002330;3.13e-18;31!UBERON:0002368;1.07e-14;33!UBERON:0000949;2.46e-12;43!UBERON:0005172;4.23e-09;52!UBERON:0005173;4.23e-09;52!UBERON:0002530;7.06e-07;57!UBERON:0001007;9.83e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.32e-28,19;UBERON:0006925,2.32e-28,19;UBERON:0008836,2.32e-28,19;UBERON:0008835,1.34e-24,22;UBERON:0003894,1.34e-24,22;UBERON:0009854,1.46e-23,23;UBERON:0007499,9.78e-22,25;UBERON:0009497,9.78e-22,25;UBERON:0000015,9.78e-22,25;UBERON:0002423,9.78e-22,25;UBERON:0006235,9.78e-22,25;UBERON:0004161,9.78e-22,25;UBERON:0009856,6.29e-21,26;UBERON:0002365,1.15e-17,31;UBERON:0002330,1.15e-17,31;UBERON:0002368,1.01e-15,35;UBERON:0000949,2.30e-12,45;UBERON:0003929,2.12e-10,54;UBERON:0005172,2.12e-10,54;UBERON:0005173,2.12e-10,54;UBERON:0002530,1.45e-09,59;UBERON:0002417,2.06e-09,60;UBERON:0000916,2.06e-09,60;UBERON:0005911,5.11e-07,82 | |||
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|short_description=p@chr10:135347313..135347318,+ | |short_description=p@chr10:135347313..135347318,+ | ||
}} | }} |
Latest revision as of 11:55, 23 July 2015
Short description: | p@chr10:135347313..135347318, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:135347313..135347318, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.53e-25 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.32e-28 | 19 |
digestive gland | 2.32e-28 | 19 |
liver bud | 2.32e-28 | 19 |
hepatic diverticulum | 1.34e-24 | 22 |
liver primordium | 1.34e-24 | 22 |
digestive tract diverticulum | 1.46e-23 | 23 |
epithelial sac | 9.78e-22 | 25 |
epithelium of foregut-midgut junction | 9.78e-22 | 25 |
anatomical boundary | 9.78e-22 | 25 |
hepatobiliary system | 9.78e-22 | 25 |
foregut-midgut junction | 9.78e-22 | 25 |
septum transversum | 9.78e-22 | 25 |
sac | 6.29e-21 | 26 |
exocrine gland | 1.15e-17 | 31 |
exocrine system | 1.15e-17 | 31 |
endocrine gland | 1.01e-15 | 35 |
endocrine system | 2.30e-12 | 45 |
gut epithelium | 2.12e-10 | 54 |
abdomen element | 2.12e-10 | 54 |
abdominal segment element | 2.12e-10 | 54 |
gland | 1.45e-09 | 59 |
abdominal segment of trunk | 2.06e-09 | 60 |
abdomen | 2.06e-09 | 60 |
endo-epithelium | 5.11e-07 | 82 |