FFCP PHASE1:Hg19::chr10:298948..298960,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:298948..298960,+ | |||
|description=CAGE_peak_at_chr10:298948..298960,+ | |||
|id=chr10:298948..298960,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002581;6.31e-21;1!CL:0002591;6.31e-21;1!CL:0002521;5.36e-08;3!CL:0000775;5.36e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,5.16e-21,1;CL:0002591,7.72e-21,1;CL:0000775,4.84e-08,3;CL:0002521,5.54e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010226;6.31e-21;1!UBERON:0006215;7.25e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.70e-08!57;UBERON:0005068!6.70e-08!57;UBERON:0006241!6.70e-08!57;UBERON:0007135!6.70e-08!57;UBERON:0002616!4.52e-07!59;UBERON:0005743!5.11e-07!86;UBERON:0001017!6.27e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;6.31e-21;1!UBERON:0002082;6.31e-21;1!UBERON:0002771;2.35e-11;2!UBERON:0000078;3.70e-11;2!UBERON:0002012;3.70e-11;2!UBERON:0005406;3.70e-11;2!UBERON:0008886;3.70e-11;2!UBERON:0002190;5.36e-08;3!UBERON:0004151;7.25e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,6.31e-21,1;UBERON:0002082,6.31e-21,1;UBERON:0010226,6.31e-21,1;UBERON:0002771,2.23e-11,2;UBERON:0005406,3.35e-11,2;UBERON:0000078,4.09e-11,2;UBERON:0007497,4.09e-11,2;UBERON:0003643,4.09e-11,2;UBERON:0003504,4.09e-11,2;UBERON:0003469,4.09e-11,2;UBERON:0003496,4.09e-11,2;UBERON:0002012,4.09e-11,2;UBERON:0008886,4.09e-11,2;UBERON:0007303,4.09e-11,2;UBERON:0002061,4.09e-11,2;UBERON:0005432,4.09e-11,2;UBERON:0004363,4.09e-11,2;UBERON:0009722,4.66e-08,11;UBERON:0007690,4.66e-08,11;UBERON:0002190,5.54e-08,3;UBERON:0004151,7.26e-08,3;UBERON:0004145,7.76e-08,3 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0.446961094427288,0.872338524100369,2.53299878168311,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0.403213486449465,0.802320587350522,0,0,0,0,0,0,0.434539556882471,0,0,0.0945348171640679,0.665188192387692,0.263504357079378,0.0654895377488563,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0.211931901159562,0.600182192168805,0,0,0.18611685633159,0.506328996723799,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0.121973706129595,0,0,0.310983165046111,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0.570762456703795,0.790204397959275,0.858486162094873,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.22001485746285,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,4.21667878966063,0,0,0,0,0.410952645100767,0,0,0,0,0.385029108839245,0,0,0.773288812777695,0.167516265334349,0,0,2.99161459204025,0,0,0,0.271265023699736,0.207970861530807,0.356857977594324,0.946214490203608,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0.106727557803444,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0.321707842287215,1.48418066444991,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0,0.368323955743585,0.459257792658427,0.182091168006717,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0.082509499920588,0,0,0,0.290012154876366,0,0,0,0.214840489736547,0,0.170453254832202,0.178064071293475,0.165284915360978,0,0,0.10115778085555,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0.282810863907425,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0.284136146806413,0.95497793895076,0,0.307160702099232,0,0.562677665642051,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0.179021174675609,0.511572370226872,0.197286811273867,2.3948309234694,0,0,0.0927680981618513,0,0.7812832832557,0.0874599999961957,0,0,0,0,0,0,0,0,0.241192877250816,1.52581736317083,0.663475559587348,0.295547618953547,0.438770794307945,0.10893846351899,0,0.153900517007594,0,0,0.179515288819544,0.325942115766024,0,0.0915975934018623,0.533034776018635,0,0,0.332423363800313,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0.247127877893006,0,0.202203398942031,0,0.468528891450678,0.182454789215666,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0.284609546029793,0.554698692052555,0.173559738335131,0.0979923974143777,0.0870592065804026,0.17472666824203,0.343972064943233,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0,0.225980740780532,0,0.19871461170299,0.0633107959558787,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0.235694034616795,0,0.209205692624666,0,0,0,0.273810757783986,0,0,0,0,0,0,0.399358000997982,0,0,0.0671834724867263,0.360299883542404,0,0.0787831823072236,0.0824158583811665,0,0.0984274815147488,0,0.795229689809303,0.408610218334727,0.160753148465019,0.137539436597234,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0.191915197319445,0,1.32418394073086,0,0,0,0.326587360109409,0,0.082092520749339,0,0,0,0,0.258565912723101,0.39669780522807,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,2.56255156294123,0.250381861413,0.573409195690071,0.110929051536852,0.0620964029413835,0,0.124980407962107,0.151649117541648,0.285465333544967,0.470531639396343,0.468334905806882,0.144921028610825,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0.302461847526478,0.310874401165561,0.295710299979268,0.318593534327405,0,0,0.414706207840855,0.265841714557995,0,0,0,0,0.181848659202559,0.429642228169954,0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| |||
|short_description=p@chr10:298948..298960,+ | |||
}} |
Latest revision as of 13:02, 23 July 2015
Short description: | p@chr10:298948..298960, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:298948..298960, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 5.16e-21 | 1 |
smooth muscle cell of the pulmonary artery | 7.72e-21 | 1 |
neutrophil | 4.84e-08 | 3 |
subcutaneous fat cell | 5.54e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 6.31e-21 | 1 |
cardiac ventricle | 6.31e-21 | 1 |
future cardiac ventricle | 6.31e-21 | 1 |
middle temporal gyrus | 2.23e-11 | 2 |
perirenal fat | 3.35e-11 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.09e-11 | 2 |
developing epithelial placode | 4.09e-11 | 2 |
respiratory system arterial blood vessel | 4.09e-11 | 2 |
respiratory system blood vessel | 4.09e-11 | 2 |
respiratory system artery | 4.09e-11 | 2 |
head blood vessel | 4.09e-11 | 2 |
pulmonary artery | 4.09e-11 | 2 |
pulmonary vascular system | 4.09e-11 | 2 |
pharyngeal vasculature | 4.09e-11 | 2 |
truncus arteriosus | 4.09e-11 | 2 |
aortic sac | 4.09e-11 | 2 |
pharyngeal arch artery | 4.09e-11 | 2 |
entire pharyngeal arch endoderm | 4.66e-08 | 11 |
early pharyngeal endoderm | 4.66e-08 | 11 |
subcutaneous adipose tissue | 5.54e-08 | 3 |
cardiac chamber | 7.26e-08 | 3 |
outflow tract | 7.76e-08 | 3 |