FFCP PHASE1:Hg19::chr10:33209195..33209229,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:33209195..33209229,+ | |||
|coexpression_cluster_id=C2057 | |||
|description=CAGE_peak_at_chr10:33209195..33209229,+ | |description=CAGE_peak_at_chr10:33209195..33209229,+ | ||
|id=chr10:33209195..33209229,+ | |id=chr10:33209195..33209229,+ | ||
|ontology_enrichment_celltype=CL:0000548!7.63e-16!679;CL:0000004!7.63e-16!679;CL:0000255!7.63e-16!679;CL:0000012!3.47e-15!682;CL:0000055!2.61e-14!180;CL:0000057!2.23e-12!75;CL:0000144!9.63e-12!625;CL:0002371!3.86e-11!591;CL:0000003!3.96e-11!722;CL:0002620!4.41e-09!23;CL:0000063!1.23e-07!578 | |ontology_enrichment_celltype=CL:0000548!7.63e-16!679;CL:0000004!7.63e-16!679;CL:0000255!7.63e-16!679;CL:0000012!3.47e-15!682;CL:0000055!2.61e-14!180;CL:0000057!2.23e-12!75;CL:0000144!9.63e-12!625;CL:0002371!3.86e-11!591;CL:0000003!3.96e-11!722;CL:0002620!4.41e-09!23;CL:0000063!1.23e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.97e-10;23!CL:0002334;1.77e-08;12!CL:1000306;2.98e-07;4!CL:0002547;2.98e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.15e-16,76;CL:0002620,1.65e-10,23;CL:0000723,1.21e-09,433;CL:0000048,3.39e-09,427;CL:0000034,4.82e-09,441;CL:0002334,7.39e-09,12;CL:1000306,2.22e-07,4;CL:0002547,2.22e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.21e-07!95;UBERON:0002199!1.59e-07!45;UBERON:0002416!1.59e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;2.98e-07;4!UBERON:0000415;2.98e-07;4!UBERON:0007240;2.98e-07;4!UBERON:0005742;2.98e-07;4!UBERON:0005734;2.98e-07;4!UBERON:0004664;2.98e-07;4!UBERON:0004663;2.98e-07;4!UBERON:0002199;9.52e-07;46!UBERON:0002416;9.52e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.21e-09,46;UBERON:0002416,1.21e-09,46;UBERON:0002097,4.97e-08,41;UBERON:0003102,1.96e-07,99;UBERON:0000415,2.22e-07,4;UBERON:0007240,2.22e-07,4;UBERON:0005742,2.22e-07,4;UBERON:0005734,2.22e-07,4;UBERON:0004664,2.22e-07,4;UBERON:0004663,2.22e-07,4 | |||
|phase1_expression=2.90685406832891,1.71280419112787,0.563817616383885,4.00293193412522,1.34088328328186,4.36169262050184,0,1.26343974685366,0.261185628199839,0,0,0.218441372130172,0.527533956456907,0.990130823680373,0.662794751455832,7.39557661096953,3.01347264011988,0.730310090387373,0.975865597581014,0,0,0,0.286235987131057,0.684372125364421,0.376627918784408,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0,0.223915474239924,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0,0.22465726229299,0.300353785683013,0,0.285012743741249,0,0.182664153764634,0,0,0,0.426730222566507,0,0,1.32208974556972,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0.473447805734733,0,0,0.589211814949674,0.443067789167242,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.403213486449465,0.267440195783507,0,0,2.01210257911091,0.383587685530591,5.06014813338393,0,1.88300474649071,0,0,0.850813354476611,0.665188192387692,0.263504357079378,0.130979075497713,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,2.09749718104953,0.275118041940067,0,0.258416759169329,0.71153252537342,0,0.805658634218294,0,0.488124115096339,0.735326160691737,0.81014194788176,0.892997282840798,0,0.112611480483322,0,0,0.549605231791222,0,0,0,2.98183171017191,2.5326102332916,2.1185468930115,7.17091551872034,1.77334191099179,0.560677600142307,0,1.2333377420858,0.311211035399766,1.0776853765575,1.14423332179421,0.151357427644931,0,0,0.624320153660641,0,0.896692083310806,0.704606991862589,0.809364721840658,1.26405726032024,0.408308342509787,0.982674538494144,0.103325781175765,0,1.23633464639278,0,0,1.17835279767846,0.250237039743928,0,0,0.919463387397059,0.300476117813194,1.58805056424029,7.17558542755448,1.49490172172997,2.7551147150743,8.70264178644767,0.309157587715317,1.8034837803194,1.11670113798954,5.06328996723799,1.65642908774038,6.56327813034698,1.93304787148829,0.80823028409406,5.68015348026583,1.10827308050404,1.01736355386293,0.773043412653187,0.545492241181669,0.286804595389004,0.243947412259191,0.132529768321485,0.69716365721711,0,0,0,0,5.14592750554308,0,0.928735856063958,0.721879481669586,1.0647612003586,0.674338760312407,0.482022059766964,0.330881918197182,0.217879444092406,0.237270619111097,0.269662616320329,0.98110732562673,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0,0.491953754172454,0.857839051492628,1.53650399572076,0,0.904760751704678,1.11106134190236,0,0,2.88662684050547,0.34779121492523,0.587043471179108,0.577465791044295,0,0.761016608938393,0,0,0,0.468008530278475,0,0.93733833986777,2.01578553838631,0.425325291727159,1.88072897675981,1.45316969256981,0,0,0.088048434013226,0,0,0.25248486685276,0.380987365753014,0,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0.7333828582095,1.80980402060889,0,0.845302752556,1.86156681609409,0,0,0,0,0.857867961948885,0,0.823240336780769,0.325736184293735,1.42156779497018,0.791951872933429,2.71295439353627,0,0.899756920638513,0,0,0,1.4377491329495,0,0,1.01346914667305,0.821905290201534,0.895304816199478,0,0.788123040807709,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0,1.91381625495949,0,0,0,1.10422342547226,0.500170521059677,1.08506009479894,1.87173775377726,3.03329280955175,1.10391690523754,0.702848489956279,0,0,1.03473071292505,5.31380478828349,0.553107505625109,2.25897397617015,0,0,0,0.647142602455851,0.320182673410333,0.303127571446259,0,0.30239029332968,1.24053903909388,1.84154367945675,1.12264037773229,1.79394808957981,0.511707249066704,0.965123526861645,0,2.92998418225046,1.42049380250502,1.64254312027618,1.55776328755086,2.20799719073923,0.725156697549733,0.40101294060657,0.644566922551274,1.14814448164607,0.728364672026868,0.786746489756545,0,1.38627606787947,0,0,1.58327443339314,0,0,0,0,0,0,0.254876273045038,0,0,0,0.522870902049801,0,0,0.325378394664303,0,0.183138929636687,0.495056999523528,0,0,1.6068392984416,1.06337790121334,0.462145851343933,1.5350367472613,1.24052915236078,1.39646318328756,0.145016693914229,0.596586391912706,0.712256285173899,2.31398881505369,0,0.127612712494584,0.4046311234222,0.464845549297286,16.9998667288546,0,0.924100740528266,0,0,0.18532421910392,0,0.744316738719335,0.316379424718726,1.33441135746677,0,0.42793898803392,0.636406495851874,0,0.719489830333259,1.09814811894422,0.471249609382746,0,0,1.26377536871694,0,1.70599442741899,0,1.09199929126389,0.848432591722276,0,1.10273068709225,0,0.438450885253763,0,1.31178950409327,0.405820753925408,0,0.563391205064483,2.15117028306077,1.27723753317057,0,1.06428319221179,2.9555068941673,2.96365403663912,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,3.21612760289743,0,0,0.569647187174163,0,0.411362273086194,0,0,0,0.640944426764839,0,0.49008043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| ||
|short_description=p@chr10:33209195..33209229,+ | |short_description=p@chr10:33209195..33209229,+ | ||
}} | }} |
Latest revision as of 13:18, 23 July 2015
Short description: | p@chr10:33209195..33209229, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:33209195..33209229, + |
Coexpression cluster: | C2057_Smooth_Fibroblast_Chondrocyte_Adipocyte_Aortic_Synoviocyte_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.15e-16 | 76 |
skin fibroblast | 1.65e-10 | 23 |
somatic stem cell | 1.21e-09 | 433 |
multi fate stem cell | 3.39e-09 | 427 |
stem cell | 4.82e-09 | 441 |
preadipocyte | 7.39e-09 | 12 |
fibroblast of tunica adventitia of artery | 2.22e-07 | 4 |
fibroblast of the aortic adventitia | 2.22e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
integument | 1.21e-09 | 46 |
integumental system | 1.21e-09 | 46 |
skin of body | 4.97e-08 | 41 |
surface structure | 1.96e-07 | 99 |
artery wall | 2.22e-07 | 4 |
tunica adventitia of artery | 2.22e-07 | 4 |
adventitia | 2.22e-07 | 4 |
tunica adventitia of blood vessel | 2.22e-07 | 4 |
aorta tunica adventitia | 2.22e-07 | 4 |
aorta wall | 2.22e-07 | 4 |