FFCP PHASE1:Hg19::chr10:33244262..33244283,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:33244262..33244283,- | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_at_chr10:33244262..33244283,- | |description=CAGE_peak_at_chr10:33244262..33244283,- | ||
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|ontology_enrichment_celltype=CL:0002334!1.24e-09!12;CL:0000057!2.58e-09!75;CL:0002620!8.58e-07!23 | |ontology_enrichment_celltype=CL:0002334!1.24e-09!12;CL:0000057!2.58e-09!75;CL:0002620!8.58e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:1000306;5.73e-08;4!CL:0002547;5.73e-08;4!CL:0002539;8.44e-07;10 | |ontology_enrichment_celltype_v019=CL:1000306;5.73e-08;4!CL:0002547;5.73e-08;4!CL:0002539;8.44e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:1000306,3.97e-08,4;CL:0002547,3.97e-08,4;CL:0002539,6.57e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0005795;8.44e-07;10!UBERON:0003918;8.44e-07;10!UBERON:0007687;8.44e-07;10 | |ontology_enrichment_development_v019=UBERON:0005795;8.44e-07;10!UBERON:0003918;8.44e-07;10!UBERON:0007687;8.44e-07;10 | ||
|ontology_enrichment_disease=DOID:2394!1.51e-08!14 | |ontology_enrichment_disease=DOID:2394!1.51e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.71e-21;3!DOID:127;1.71e-21;3!DOID:0060072;2.84e-16;4!DOID:3371;9.77e-09;1!DOID:4549;9.77e-09;1!DOID:5861;9.77e-09;1!DOID:6496;9.77e-09;1!DOID:6193;3.56e-08;1 | |ontology_enrichment_disease_v019=DOID:0060084;1.71e-21;3!DOID:127;1.71e-21;3!DOID:0060072;2.84e-16;4!DOID:3371;9.77e-09;1!DOID:4549;9.77e-09;1!DOID:5861;9.77e-09;1!DOID:6496;9.77e-09;1!DOID:6193;3.56e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.21e-22,3;DOID:127,6.21e-22,3;DOID:0060072,1.34e-16,4;DOID:3371,9.79e-09,1;DOID:4549,9.79e-09,1;DOID:5861,9.79e-09,1;DOID:6496,9.79e-09,1;DOID:6193,2.33e-08,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000947;3.75e-08;21!UBERON:0010191;3.75e-08;21!UBERON:0004797;5.73e-08;4!UBERON:0000415;5.73e-08;4!UBERON:0007240;5.73e-08;4!UBERON:0005742;5.73e-08;4!UBERON:0005734;5.73e-08;4!UBERON:0004664;5.73e-08;4!UBERON:0004663;5.73e-08;4!UBERON:0004237;8.44e-07;10!UBERON:0004695;8.44e-07;10!UBERON:0002111;8.44e-07;10!UBERON:0004178;8.44e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0000947;3.75e-08;21!UBERON:0010191;3.75e-08;21!UBERON:0004797;5.73e-08;4!UBERON:0000415;5.73e-08;4!UBERON:0007240;5.73e-08;4!UBERON:0005742;5.73e-08;4!UBERON:0005734;5.73e-08;4!UBERON:0004664;5.73e-08;4!UBERON:0004663;5.73e-08;4!UBERON:0004237;8.44e-07;10!UBERON:0004695;8.44e-07;10!UBERON:0002111;8.44e-07;10!UBERON:0004178;8.44e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,2.62e-08,21;UBERON:0010191,2.62e-08,21;UBERON:0000415,3.97e-08,4;UBERON:0007240,3.97e-08,4;UBERON:0005742,3.97e-08,4;UBERON:0005734,3.97e-08,4;UBERON:0004664,3.97e-08,4;UBERON:0004663,3.97e-08,4;UBERON:0004237,6.57e-07,10;UBERON:0004695,6.57e-07,10;UBERON:0002111,6.57e-07,10;UBERON:0004178,6.57e-07,10 | |||
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| ||
|short_description=p@chr10:33244262..33244283,- | |short_description=p@chr10:33244262..33244283,- | ||
}} | }} |
Latest revision as of 13:19, 23 July 2015
Short description: | p@chr10:33244262..33244283, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:33244262..33244283, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 3.97e-08 | 4 |
fibroblast of the aortic adventitia | 3.97e-08 | 4 |
aortic smooth muscle cell | 6.57e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
aorta | 2.62e-08 | 21 |
aortic system | 2.62e-08 | 21 |
artery wall | 3.97e-08 | 4 |
tunica adventitia of artery | 3.97e-08 | 4 |
adventitia | 3.97e-08 | 4 |
tunica adventitia of blood vessel | 3.97e-08 | 4 |
aorta tunica adventitia | 3.97e-08 | 4 |
aorta wall | 3.97e-08 | 4 |
blood vessel smooth muscle | 6.57e-07 | 10 |
arterial system smooth muscle | 6.57e-07 | 10 |
artery smooth muscle tissue | 6.57e-07 | 10 |
aorta smooth muscle tissue | 6.57e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.21e-22 | 3 |
leiomyoma | 6.21e-22 | 3 |
benign neoplasm | 1.34e-16 | 4 |
chondrosarcoma | 9.79e-09 | 1 |
extraosseous chondrosarcoma | 9.79e-09 | 1 |
myxoid chondrosarcoma | 9.79e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 9.79e-09 | 1 |
epithelioid sarcoma | 2.33e-08 | 1 |