FFCP PHASE1:Hg19::chr10:54532521..54532549,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:54532521..54532549,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr10:54532521..54532549,- | |||
|id=chr10:54532521..54532549,- | |||
|ontology_enrichment_celltype=CL:0000181!4.24e-18!12;CL:0000417!4.24e-18!12;CL:0000668!4.24e-18!12;CL:0000414!4.24e-18!12;CL:0000412!4.24e-18!12;CL:0000182!4.24e-18!12;CL:0000453!2.74e-11!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.41e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.41e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.76e-11;11!UBERON:0009497;1.06e-09;13 | |||
|ontology_enrichment_disease=DOID:0060060!3.02e-07!1;DOID:0060061!3.02e-07!1;DOID:8691!3.02e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.40e-20!19;UBERON:0006925!9.40e-20!19;UBERON:0008836!9.40e-20!19;UBERON:0005057!1.05e-17!26;UBERON:0008835!6.81e-17!22;UBERON:0003894!6.81e-17!22;UBERON:0009854!4.18e-16!23;UBERON:0007499!1.02e-14!25;UBERON:0009497!1.02e-14!25;UBERON:0000015!1.02e-14!25;UBERON:0002423!1.02e-14!25;UBERON:0006235!1.02e-14!25;UBERON:0004161!1.02e-14!25;UBERON:0009856!4.18e-14!26;UBERON:0003929!8.71e-14!54;UBERON:0002365!1.25e-11!31;UBERON:0002330!1.25e-11!31;UBERON:0005172!2.38e-11!55;UBERON:0005173!2.38e-11!55;UBERON:0002530!2.52e-10!59;UBERON:0002368!3.68e-10!35;UBERON:0002417!4.97e-10!61;UBERON:0000916!4.97e-10!61;UBERON:0005911!2.74e-08!82;UBERON:0000949!1.25e-07!45;UBERON:0002146!2.67e-07!1;UBERON:0005623!2.67e-07!1;UBERON:0001301!4.08e-07!1;UBERON:0007190!6.97e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.13e-37;19!UBERON:0006925;3.13e-37;19!UBERON:0002423;1.96e-28;25!UBERON:0002365;5.80e-23;31!UBERON:0002330;5.80e-23;31!UBERON:0002368;7.81e-20;33!UBERON:0000949;2.19e-14;43!UBERON:0005172;2.23e-10;52!UBERON:0005173;2.23e-10;52!UBERON:0002417;5.11e-08;58!UBERON:0000916;5.11e-08;58!UBERON:0002530;1.43e-07;57!UBERON:0001007;1.87e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.25e-37,19;UBERON:0006925,3.25e-37,19;UBERON:0008836,3.25e-37,19;UBERON:0008835,3.20e-32,22;UBERON:0003894,3.20e-32,22;UBERON:0009854,7.61e-31,23;UBERON:0007499,2.01e-28,25;UBERON:0009497,2.01e-28,25;UBERON:0000015,2.01e-28,25;UBERON:0002423,2.01e-28,25;UBERON:0006235,2.01e-28,25;UBERON:0004161,2.01e-28,25;UBERON:0009856,2.38e-27,26;UBERON:0002365,5.06e-23,31;UBERON:0002330,5.06e-23,31;UBERON:0002368,1.90e-20,35;UBERON:0000949,5.31e-16,45;UBERON:0003929,2.12e-13,54;UBERON:0005172,2.12e-13,54;UBERON:0005173,2.12e-13,54;UBERON:0002530,2.70e-12,59;UBERON:0002417,4.27e-12,60;UBERON:0000916,4.27e-12,60;UBERON:0005911,6.22e-09,82;UBERON:0001041,1.96e-08,87;UBERON:0005177,2.68e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,105.20667890212,77.6433501175324,73.8487383351755,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,120.867106662778,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,117.020744365536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.630265458457789,0.741742725430498,0.808842526250219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,120.75904055074,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.398594520940089,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:54532521..54532549,- | |||
}} |
Latest revision as of 14:11, 23 July 2015
Short description: | p@chr10:54532521..54532549, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:54532521..54532549, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.41e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.25e-37 | 19 |
digestive gland | 3.25e-37 | 19 |
liver bud | 3.25e-37 | 19 |
hepatic diverticulum | 3.20e-32 | 22 |
liver primordium | 3.20e-32 | 22 |
digestive tract diverticulum | 7.61e-31 | 23 |
epithelial sac | 2.01e-28 | 25 |
epithelium of foregut-midgut junction | 2.01e-28 | 25 |
anatomical boundary | 2.01e-28 | 25 |
hepatobiliary system | 2.01e-28 | 25 |
foregut-midgut junction | 2.01e-28 | 25 |
septum transversum | 2.01e-28 | 25 |
sac | 2.38e-27 | 26 |
exocrine gland | 5.06e-23 | 31 |
exocrine system | 5.06e-23 | 31 |
endocrine gland | 1.90e-20 | 35 |
endocrine system | 5.31e-16 | 45 |
gut epithelium | 2.12e-13 | 54 |
abdomen element | 2.12e-13 | 54 |
abdominal segment element | 2.12e-13 | 54 |
gland | 2.70e-12 | 59 |
abdominal segment of trunk | 4.27e-12 | 60 |
abdomen | 4.27e-12 | 60 |
endo-epithelium | 6.22e-09 | 82 |
foregut | 1.96e-08 | 87 |
trunk region element | 2.68e-07 | 101 |