FFCP PHASE1:Hg19::chr10:5652892..5652903,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-136bp_to_ENST00000425246_5end | |association_with_transcript=-136bp_to_ENST00000425246_5end | ||
|cluster_id=chr10:5652892..5652903,- | |||
|description=CAGE_peak_2_at_ENST00000425246_5end | |description=CAGE_peak_2_at_ENST00000425246_5end | ||
|id=chr10:5652892..5652903,- | |id=chr10:5652892..5652903,- | ||
|ontology_enrichment_celltype=CL:0000066!3.64e-20!254;CL:0002159!3.72e-15!13;CL:0002076!9.48e-14!43;CL:0002231!5.34e-13!3;CL:0000223!8.02e-11!59;CL:0000244!1.34e-10!4;CL:0000731!1.34e-10!4;CL:0002327!2.52e-10!4;CL:0000575!1.18e-09!2;CL:1000415!8.70e-09!2;CL:0002368!5.44e-08!13;CL:0002077!6.76e-07!33;CL:0002621!7.90e-07!3 | |ontology_enrichment_celltype=CL:0000066!3.64e-20!254;CL:0002159!3.72e-15!13;CL:0002076!9.48e-14!43;CL:0002231!5.34e-13!3;CL:0000223!8.02e-11!59;CL:0000244!1.34e-10!4;CL:0000731!1.34e-10!4;CL:0002327!2.52e-10!4;CL:0000575!1.18e-09!2;CL:1000415!8.70e-09!2;CL:0002368!5.44e-08!13;CL:0002077!6.76e-07!33;CL:0002621!7.90e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000244;3.42e-11;4!CL:0000731;3.42e-11;4!CL:0000312;3.22e-09;5!CL:0000240;6.78e-08;6!CL:0000311;6.78e-08;6!CL:0000079;6.78e-08;6!CL:0000237;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,3.10e-11,4;CL:0000731,3.10e-11,4;CL:0000312,3.49e-09,5;CL:0000240,7.25e-08,6;CL:0000311,7.25e-08,6;CL:0000079,7.25e-08,6;CL:0000237,7.25e-08,6;CL:0000036,7.25e-08,6;CL:0000357,7.25e-08,6;CL:0000114,7.25e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000357;6.78e-08;6!CL:0000114;6.78e-08;6 | |||
|ontology_enrichment_disease=DOID:4929!1.40e-09!2;DOID:1749!4.03e-07!14 | |ontology_enrichment_disease=DOID:4929!1.40e-09!2;DOID:1749!4.03e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:4929;3.44e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,3.11e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0000365!3.33e-14!5;UBERON:0005910!7.57e-12!6;UBERON:0004119!2.31e-11!169;UBERON:0000925!2.31e-11!169;UBERON:0006595!2.31e-11!169;UBERON:0005911!1.13e-10!82;UBERON:0001911!2.52e-10!4;UBERON:0005333!2.52e-10!4;UBERON:0008425!2.52e-10!4;UBERON:0005311!2.52e-10!4;UBERON:0002294!1.51e-09!7;UBERON:0001173!1.51e-09!7;UBERON:0004912!1.51e-09!7;UBERON:0000161!4.00e-08!35;UBERON:0005157!1.08e-07!51;UBERON:0003102!1.34e-07!95;UBERON:0006554!1.41e-07!44;UBERON:0005153!1.65e-07!37;UBERON:0001008!2.28e-07!45;UBERON:0000162!4.55e-07!14;UBERON:0001353!4.55e-07!14;UBERON:0000163!4.55e-07!14;UBERON:0006866!4.55e-07!14;UBERON:0000164!4.55e-07!14;UBERON:0000931!4.55e-07!14;UBERON:0003929!4.92e-07!54;UBERON:0001949!7.90e-07!3 | |ontology_enrichment_uberon=UBERON:0000365!3.33e-14!5;UBERON:0005910!7.57e-12!6;UBERON:0004119!2.31e-11!169;UBERON:0000925!2.31e-11!169;UBERON:0006595!2.31e-11!169;UBERON:0005911!1.13e-10!82;UBERON:0001911!2.52e-10!4;UBERON:0005333!2.52e-10!4;UBERON:0008425!2.52e-10!4;UBERON:0005311!2.52e-10!4;UBERON:0002294!1.51e-09!7;UBERON:0001173!1.51e-09!7;UBERON:0004912!1.51e-09!7;UBERON:0000161!4.00e-08!35;UBERON:0005157!1.08e-07!51;UBERON:0003102!1.34e-07!95;UBERON:0006554!1.41e-07!44;UBERON:0005153!1.65e-07!37;UBERON:0001008!2.28e-07!45;UBERON:0000162!4.55e-07!14;UBERON:0001353!4.55e-07!14;UBERON:0000163!4.55e-07!14;UBERON:0006866!4.55e-07!14;UBERON:0000164!4.55e-07!14;UBERON:0000931!4.55e-07!14;UBERON:0003929!4.92e-07!54;UBERON:0001949!7.90e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;8.10e-41;1!UBERON:0003703;8.10e-41;1!UBERON:0001174;8.10e-41;1!UBERON:0004914;8.10e-41;1!UBERON:0002114;1.31e-14;2!UBERON:0003343;2.66e-11;4!UBERON:0002394;2.66e-11;4!UBERON:0004785;2.66e-11;4!UBERON:0003928;2.66e-11;4!UBERON:0002108;2.63e-09;4!UBERON:0000365;3.22e-09;5!UBERON:0000974;5.73e-08;6!UBERON:0005910;6.78e-08;6!UBERON:0002294;5.22e-07;7!UBERON:0001173;5.22e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,6.62e-41,1;UBERON:0003703,6.62e-41,1;UBERON:0001174,6.62e-41,1;UBERON:0004914,6.62e-41,1;UBERON:0002114,1.22e-14,2;UBERON:0003343,2.80e-11,4;UBERON:0004785,2.80e-11,4;UBERON:0002108,2.53e-09,4;UBERON:0000365,2.97e-09,5;UBERON:0002394,5.54e-08,6;UBERON:0003928,5.54e-08,6;UBERON:0005910,6.34e-08,6 | |||
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| ||
|short_description=p2@ENST00000425246 | |short_description=p2@ENST00000425246 | ||
}} | }} |
Latest revision as of 14:13, 23 July 2015
Short description: | p2@ENST00000425246 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000425246_5end |
Coexpression cluster: | NA |
Association with transcript: | -136bp_to_ENST00000425246_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 3.10e-11 | 4 |
urothelial cell | 3.10e-11 | 4 |
keratinocyte | 3.49e-09 | 5 |
stratified squamous epithelial cell | 7.25e-08 | 6 |
keratin accumulating cell | 7.25e-08 | 6 |
stratified epithelial cell | 7.25e-08 | 6 |
keratinizing barrier epithelial cell | 7.25e-08 | 6 |
epithelial fate stem cell | 7.25e-08 | 6 |
stratified epithelial stem cell | 7.25e-08 | 6 |
surface ectodermal cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 6.62e-41 | 1 |
extrahepatic bile duct | 6.62e-41 | 1 |
common bile duct | 6.62e-41 | 1 |
duodenal papilla | 6.62e-41 | 1 |
duodenum | 1.22e-14 | 2 |
mucosa of oral region | 2.80e-11 | 4 |
respiratory system mucosa | 2.80e-11 | 4 |
small intestine | 2.53e-09 | 4 |
urothelium | 2.97e-09 | 5 |
bile duct | 5.54e-08 | 6 |
digestive system duct | 5.54e-08 | 6 |
transitional epithelium | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 3.11e-21 | 2 |