FFCP PHASE1:Hg19::chr10:70730738..70730743,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:70730738..70730743,+ | |||
|coexpression_cluster_id=C1592 | |coexpression_cluster_id=C1592 | ||
|description=CAGE_peak_at_chr10:70730738..70730743,+ | |description=CAGE_peak_at_chr10:70730738..70730743,+ | ||
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|ontology_enrichment_celltype=CL:0000037!4.73e-15!172;CL:0000566!4.73e-15!172;CL:0000988!1.04e-13!182;CL:0000738!4.47e-13!140;CL:0002032!6.38e-13!165;CL:0000837!6.38e-13!165;CL:0002031!2.80e-09!124;CL:0002087!4.19e-09!119;CL:0000763!4.77e-07!112;CL:0000049!4.77e-07!112;CL:0000542!8.54e-07!53;CL:0000051!8.54e-07!53 | |ontology_enrichment_celltype=CL:0000037!4.73e-15!172;CL:0000566!4.73e-15!172;CL:0000988!1.04e-13!182;CL:0000738!4.47e-13!140;CL:0002032!6.38e-13!165;CL:0000837!6.38e-13!165;CL:0002031!2.80e-09!124;CL:0002087!4.19e-09!119;CL:0000763!4.77e-07!112;CL:0000049!4.77e-07!112;CL:0000542!8.54e-07!53;CL:0000051!8.54e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000624;5.48e-10;6!CL:0002393;1.52e-07;6!CL:0002397;1.52e-07;6!CL:0000094;4.55e-07;8!CL:0000623;9.20e-07;3 | |ontology_enrichment_celltype_v019=CL:0000624;5.48e-10;6!CL:0002393;1.52e-07;6!CL:0002397;1.52e-07;6!CL:0000094;4.55e-07;8!CL:0000623;9.20e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.07e-21,168;CL:0000738,1.25e-20,136;CL:0000988,1.74e-20,177;CL:0002032,3.53e-19,161;CL:0000837,3.53e-19,161;CL:0002087,8.28e-14,115;CL:0002031,1.76e-13,120;CL:0002393,1.11e-11,9;CL:0002397,1.11e-11,9;CL:0000624,2.10e-10,6;CL:0000763,5.06e-10,108;CL:0000049,5.06e-10,108;CL:0000542,9.44e-10,53;CL:0000051,9.44e-10,53;CL:0000838,4.15e-09,52;CL:0000766,4.66e-08,72;CL:0000094,3.20e-07,8 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!4.35e-18!235;DOID:14566!6.26e-18!239;DOID:0050687!7.61e-13!143;DOID:0050686!4.19e-10!137;DOID:305!9.07e-10!106 | |ontology_enrichment_disease=DOID:162!4.35e-18!235;DOID:14566!6.26e-18!239;DOID:0050687!7.61e-13!143;DOID:0050686!4.19e-10!137;DOID:305!9.07e-10!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.10e-07,98;UBERON:0003061,2.10e-07,98 | |||
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|short_description=p@chr10:70730738..70730743,+ | |short_description=p@chr10:70730738..70730743,+ | ||
}} | }} |
Latest revision as of 15:00, 23 July 2015
Short description: | p@chr10:70730738..70730743, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:70730738..70730743, + |
Coexpression cluster: | C1592_Neutrophils_Natural_CD19_CD4_CD8_Peripheral_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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hematopoietic stem cell | 1.07e-21 | 168 |
leukocyte | 1.25e-20 | 136 |
hematopoietic cell | 1.74e-20 | 177 |
hematopoietic oligopotent progenitor cell | 3.53e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.53e-19 | 161 |
nongranular leukocyte | 8.28e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 1.76e-13 | 120 |
intermediate monocyte | 1.11e-11 | 9 |
CD14-positive, CD16-positive monocyte | 1.11e-11 | 9 |
CD4-positive, alpha-beta T cell | 2.10e-10 | 6 |
myeloid cell | 5.06e-10 | 108 |
common myeloid progenitor | 5.06e-10 | 108 |
lymphocyte | 9.44e-10 | 53 |
common lymphoid progenitor | 9.44e-10 | 53 |
lymphoid lineage restricted progenitor cell | 4.15e-09 | 52 |
myeloid leukocyte | 4.66e-08 | 72 |
granulocyte | 3.20e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.10e-07 | 98 |
blood island | 2.10e-07 | 98 |