FFCP PHASE1:Hg19::chr10:82264452..82264468,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:82264452..82264468,+ | |||
|coexpression_cluster_id=C235 | |coexpression_cluster_id=C235 | ||
|description=CAGE_peak_at_chr10:82264452..82264468,+ | |description=CAGE_peak_at_chr10:82264452..82264468,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!1.31e-08!3;CL:0002231!2.46e-08!3;CL:0002563!8.77e-07!4 | |ontology_enrichment_celltype=CL:0002541!1.31e-08!3;CL:0002231!2.46e-08!3;CL:0002563!8.77e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002563;5.14e-50;4!CL:0002253;7.14e-26;2!CL:0002231;6.76e-18;3!CL:0002076;4.82e-12;42!CL:0002251;5.70e-11;20 | |ontology_enrichment_celltype_v019=CL:0002563;5.14e-50;4!CL:0002253;7.14e-26;2!CL:0002231;6.76e-18;3!CL:0002076;4.82e-12;42!CL:0002251;5.70e-11;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.14e-50,4;CL:0002253,7.14e-26,2;CL:0002231,6.76e-18,3;CL:0002076,1.56e-11,42;CL:0002251,5.70e-11,20;CL:0000223,1.35e-08,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.18e-11!27;UBERON:0003929!3.56e-10!54;UBERON:0005409!8.67e-09!35;UBERON:0000476!1.31e-08!3;UBERON:0000920!1.31e-08!3;UBERON:0004921!1.51e-08!129;UBERON:0004185!1.51e-08!129;UBERON:0001007!1.61e-08!155;UBERON:0001555!1.61e-08!155;UBERON:0007026!1.61e-08!155;UBERON:0004119!1.70e-07!169;UBERON:0000925!1.70e-07!169;UBERON:0006595!1.70e-07!169;UBERON:0005911!2.91e-07!82;UBERON:0001301!5.57e-07!1;UBERON:0001242!8.77e-07!4;UBERON:0001262!8.77e-07!4;UBERON:0004786!8.77e-07!4;UBERON:0004808!8.77e-07!4;UBERON:0001277!8.77e-07!4 | |ontology_enrichment_uberon=UBERON:0000160!1.18e-11!27;UBERON:0003929!3.56e-10!54;UBERON:0005409!8.67e-09!35;UBERON:0000476!1.31e-08!3;UBERON:0000920!1.31e-08!3;UBERON:0004921!1.51e-08!129;UBERON:0004185!1.51e-08!129;UBERON:0001007!1.61e-08!155;UBERON:0001555!1.61e-08!155;UBERON:0007026!1.61e-08!155;UBERON:0004119!1.70e-07!169;UBERON:0000925!1.70e-07!169;UBERON:0006595!1.70e-07!169;UBERON:0005911!2.91e-07!82;UBERON:0001301!5.57e-07!1;UBERON:0001242!8.77e-07!4;UBERON:0001262!8.77e-07!4;UBERON:0004786!8.77e-07!4;UBERON:0004808!8.77e-07!4;UBERON:0001277!8.77e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;5.14e-50;4!UBERON:0001262;5.14e-50;4!UBERON:0004786;5.14e-50;4!UBERON:0004808;5.14e-50;4!UBERON:0001277;5.14e-50;4!UBERON:0000485;3.65e-29;7!UBERON:0003929;3.65e-29;7!UBERON:0003350;1.11e-25;8!UBERON:0000160;1.81e-25;17!UBERON:0005409;3.62e-20;22!UBERON:0002114;1.12e-17;2!UBERON:0001052;1.13e-13;4!UBERON:0004921;1.76e-12;33!UBERON:0004907;3.26e-11;5!UBERON:0002108;3.60e-11;4!UBERON:0000344;5.70e-11;20!UBERON:0001155;8.37e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001242;5.14e-50;4!UBERON:0001262;5.14e-50;4!UBERON:0004786;5.14e-50;4!UBERON:0004808;5.14e-50;4!UBERON:0001277;5.14e-50;4!UBERON:0000485;3.65e-29;7!UBERON:0003929;3.65e-29;7!UBERON:0003350;1.11e-25;8!UBERON:0000160;1.81e-25;17!UBERON:0005409;3.62e-20;22!UBERON:0002114;1.12e-17;2!UBERON:0001052;1.13e-13;4!UBERON:0004921;1.76e-12;33!UBERON:0004907;3.26e-11;5!UBERON:0002108;3.60e-11;4!UBERON:0000344;5.70e-11;20!UBERON:0001155;8.37e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.14e-50,4;UBERON:0001262,5.14e-50,4;UBERON:0004786,5.14e-50,4;UBERON:0004808,5.14e-50,4;UBERON:0001277,5.14e-50,4;UBERON:0003350,1.11e-25,8;UBERON:0000160,1.81e-25,17;UBERON:0000485,5.74e-23,9;UBERON:0005409,5.83e-18,25;UBERON:0002114,1.12e-17,2;UBERON:0001052,1.13e-13,4;UBERON:0001046,1.63e-11,19;UBERON:0004907,3.26e-11,5;UBERON:0002108,3.60e-11,4;UBERON:0000344,5.70e-11,20;UBERON:0003929,3.61e-09,54;UBERON:0004921,1.75e-07,118;UBERON:0001155,8.37e-07,9 | |||
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|short_description=p@chr10:82264452..82264468,+ | |short_description=p@chr10:82264452..82264468,+ | ||
}} | }} |
Latest revision as of 16:10, 23 July 2015
Short description: | p@chr10:82264452..82264468, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:82264452..82264468, + |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.14e-50 | 4 |
epithelial cell of large intestine | 7.14e-26 | 2 |
epithelial cell of prostate | 6.76e-18 | 3 |
endo-epithelial cell | 1.56e-11 | 42 |
epithelial cell of alimentary canal | 5.70e-11 | 20 |
endodermal cell | 1.35e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 5.14e-50 | 4 |
wall of intestine | 5.14e-50 | 4 |
gastrointestinal system mucosa | 5.14e-50 | 4 |
gastrointestinal system epithelium | 5.14e-50 | 4 |
intestinal epithelium | 5.14e-50 | 4 |
epithelium of mucosa | 1.11e-25 | 8 |
intestine | 1.81e-25 | 17 |
simple columnar epithelium | 5.74e-23 | 9 |
gastrointestinal system | 5.83e-18 | 25 |
duodenum | 1.12e-17 | 2 |
rectum | 1.13e-13 | 4 |
hindgut | 1.63e-11 | 19 |
lower digestive tract | 3.26e-11 | 5 |
small intestine | 3.60e-11 | 4 |
mucosa | 5.70e-11 | 20 |
gut epithelium | 3.61e-09 | 54 |
subdivision of digestive tract | 1.75e-07 | 118 |
colon | 8.37e-07 | 9 |