FFCP PHASE1:Hg19::chr11:102475880..102475889,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:102475880..102475889,+ | |||
|description=CAGE_peak_at_chr11:102475880..102475889,+ | |||
|id=chr11:102475880..102475889,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.95e-10!254;CL:0000223!1.95e-07!59;CL:0002322!3.19e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:1000415;9.40e-14;2!CL:0002231;1.60e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,9.40e-14,2;CL:0002231,1.67e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.64e-26;1 | |||
|ontology_enrichment_disease=DOID:305!1.06e-13!106;DOID:0050687!1.30e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:4929;6.43e-14;2!DOID:4468;7.77e-14;2!DOID:299;1.17e-09;25!DOID:3119;3.83e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,6.43e-14,2;DOID:4468,8.28e-14,2;DOID:299,1.17e-09,25;DOID:3119,3.76e-08,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.16e-26;1!UBERON:0003703;2.16e-26;1!UBERON:0001174;2.16e-26;1!UBERON:0004914;2.16e-26;1!UBERON:0002294;2.85e-15;7!UBERON:0001173;2.85e-15;7!UBERON:0002114;1.01e-09;2!UBERON:0002110;1.30e-09;3!UBERON:0002394;1.31e-07;4!UBERON:0003928;1.31e-07;4!UBERON:0001052;1.44e-07;4!UBERON:0001987;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.16e-26,1;UBERON:0003703,2.16e-26,1;UBERON:0001174,2.16e-26,1;UBERON:0004914,2.16e-26,1;UBERON:0002294,4.18e-12,9;UBERON:0001173,4.18e-12,9;UBERON:0004912,4.18e-12,9;UBERON:0002114,1.01e-09,2;UBERON:0002110,1.30e-09,3;UBERON:0006242,1.30e-09,3;UBERON:0001052,1.40e-07,4;UBERON:0001987,2.04e-07,4;UBERON:0004340,2.04e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.310983165046111,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,10.6101325303446,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,1.70765727617876,0.138674673013139,0,0,0.69647365264322,0,0,0,0,0,0,0,0,0,0,0,0,3.12619398980981,0,0,0,0.114536596165916,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0.160753148465019,0.412618309791701,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,11.9763429835807,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,1.41923792260222,0,0.171488009437418,0,0,0,0,0.078493092850514,0,10.9306143692378,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.68732060563215,0,0,0,0.98150233615243,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0.275684698604535,0,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0,0.0717222053926763,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:102475880..102475889,+ | |||
}} |
Latest revision as of 17:29, 23 July 2015
Short description: | p@chr11:102475880..102475889, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:102475880..102475889, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 9.40e-14 | 2 |
epithelial cell of prostate | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.16e-26 | 1 |
extrahepatic bile duct | 2.16e-26 | 1 |
common bile duct | 2.16e-26 | 1 |
duodenal papilla | 2.16e-26 | 1 |
biliary system | 4.18e-12 | 9 |
biliary tree | 4.18e-12 | 9 |
biliary bud | 4.18e-12 | 9 |
duodenum | 1.01e-09 | 2 |
gallbladder | 1.30e-09 | 3 |
gall bladder primordium | 1.30e-09 | 3 |
rectum | 1.40e-07 | 4 |
placenta | 2.04e-07 | 4 |
allantois | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 6.43e-14 | 2 |
clear cell adenocarcinoma | 8.28e-14 | 2 |
adenocarcinoma | 1.17e-09 | 25 |
gastrointestinal system cancer | 3.76e-08 | 14 |