FFCP PHASE1:Hg19::chr11:122293490..122293502,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=76bp_to_ENST00000526674_5end | |association_with_transcript=76bp_to_ENST00000526674_5end | ||
|cluster_id=chr11:122293490..122293502,- | |||
|description=CAGE_peak_3_at_ENST00000526674_5end | |description=CAGE_peak_3_at_ENST00000526674_5end | ||
|id=chr11:122293490..122293502,- | |id=chr11:122293490..122293502,- | ||
|ontology_enrichment_celltype=CL:0002150!6.93e-11!3;CL:0000861!6.93e-11!3 | |ontology_enrichment_celltype=CL:0002150!6.93e-11!3;CL:0000861!6.93e-11!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.37e-15;29!UBERON:0007123;7.75e-14;5!UBERON:0003124;3.71e-09;1 | |||
|ontology_enrichment_disease=DOID:0050687!2.29e-08!143;DOID:305!6.21e-08!106;DOID:4231!4.11e-07!2;DOID:1907!4.11e-07!2 | |ontology_enrichment_disease=DOID:0050687!2.29e-08!143;DOID:305!6.21e-08!106;DOID:4231!4.11e-07!2;DOID:1907!4.11e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3112;1.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.79e-15,106;DOID:0050687,8.56e-12,143;DOID:3112,1.13e-08,1;DOID:162,8.08e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.36e-30!9;UBERON:0001557!1.70e-13!19;UBERON:0002046!5.71e-11!5;UBERON:0004117!5.71e-11!5;UBERON:0007689!5.71e-11!5;UBERON:0007123!5.71e-11!5;UBERON:0003091!5.71e-11!5;UBERON:0008947!1.00e-08!38;UBERON:0003258!1.00e-08!38;UBERON:0000065!5.69e-08!53;UBERON:0001905!8.88e-08!2;UBERON:0002757!8.88e-08!2;UBERON:0010134!8.88e-08!2;UBERON:0002784!8.88e-08!2;UBERON:0005408!8.88e-08!2;UBERON:0001899!8.88e-08!2 | |ontology_enrichment_uberon=UBERON:0001737!1.36e-30!9;UBERON:0001557!1.70e-13!19;UBERON:0002046!5.71e-11!5;UBERON:0004117!5.71e-11!5;UBERON:0007689!5.71e-11!5;UBERON:0007123!5.71e-11!5;UBERON:0003091!5.71e-11!5;UBERON:0008947!1.00e-08!38;UBERON:0003258!1.00e-08!38;UBERON:0000065!5.69e-08!53;UBERON:0001905!8.88e-08!2;UBERON:0002757!8.88e-08!2;UBERON:0010134!8.88e-08!2;UBERON:0002784!8.88e-08!2;UBERON:0005408!8.88e-08!2;UBERON:0001899!8.88e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.97e-52;9!UBERON:0001557;9.97e-52;9!UBERON:0002046;7.75e-14;5!UBERON:0000072;4.12e-11;37!UBERON:0000065;3.88e-09;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.05e-52,9;UBERON:0001557,1.93e-24,19;UBERON:0002046,7.13e-14,5;UBERON:0004117,7.13e-14,5;UBERON:0007689,7.13e-14,5;UBERON:0007123,7.13e-14,5;UBERON:0003091,7.13e-14,5;UBERON:0008947,1.12e-11,38;UBERON:0003258,1.12e-11,38;UBERON:0000072,3.16e-09,47;UBERON:0000065,6.92e-08,54 | |||
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| ||
|short_description=p3@ENST00000526674 | |short_description=p3@ENST00000526674 | ||
}} | }} |
Latest revision as of 19:19, 23 July 2015
Short description: | p3@ENST00000526674 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000526674_5end |
Coexpression cluster: | NA |
Association with transcript: | 76bp_to_ENST00000526674_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.05e-52 | 9 |
upper respiratory tract | 1.93e-24 | 19 |
thyroid gland | 7.13e-14 | 5 |
pharyngeal pouch | 7.13e-14 | 5 |
thyroid diverticulum | 7.13e-14 | 5 |
pharyngeal pouch 2 | 7.13e-14 | 5 |
thyroid primordium | 7.13e-14 | 5 |
respiratory primordium | 1.12e-11 | 38 |
endoderm of foregut | 1.12e-11 | 38 |
segment of respiratory tract | 3.16e-09 | 47 |
respiratory tract | 6.92e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.79e-15 | 106 |
cell type cancer | 8.56e-12 | 143 |
papillary adenocarcinoma | 1.13e-08 | 1 |
cancer | 8.08e-07 | 235 |