FFCP PHASE1:Hg19::chr11:1774731..1774765,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1774731..1774765,- | |||
|coexpression_cluster_id=C587 | |coexpression_cluster_id=C587 | ||
|description=CAGE_peak_at_chr11:1774731..1774765,- | |description=CAGE_peak_at_chr11:1774731..1774765,- | ||
|id=chr11:1774731..1774765,- | |id=chr11:1774731..1774765,- | ||
|ontology_enrichment_celltype=CL:0000557!3.60e-13!71;CL:0000839!5.32e-13!70;CL:0000766!3.20e-12!76;CL:0002194!9.77e-12!63;CL:0000576!9.77e-12!63;CL:0000040!9.77e-12!63;CL:0000559!9.77e-12!63;CL:0002009!1.83e-11!65;CL:0002057!1.06e-08!42;CL:0000860!2.64e-08!45 | |ontology_enrichment_celltype=CL:0000557!3.60e-13!71;CL:0000839!5.32e-13!70;CL:0000766!3.20e-12!76;CL:0002194!9.77e-12!63;CL:0000576!9.77e-12!63;CL:0000040!9.77e-12!63;CL:0000559!9.77e-12!63;CL:0002009!1.83e-11!65;CL:0002057!1.06e-08!42;CL:0000860!2.64e-08!45 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.99e-12;39!CL:0000234;3.99e-12;39!CL:0000860;1.02e-09;33!CL:0002057;1.02e-09;33!CL:0000766;4.82e-08;69!CL:0000576;7.39e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.27e-16,67;CL:0000839,2.05e-16,66;CL:0000766,1.66e-15,72;CL:0002194,2.16e-14,59;CL:0000576,2.16e-14,59;CL:0000040,2.16e-14,59;CL:0000559,2.16e-14,59;CL:0002009,4.51e-14,61;CL:0000473,5.08e-14,48;CL:0000234,5.08e-14,48;CL:0000860,5.31e-10,42;CL:0002057,5.31e-10,42 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.88e-12!115;UBERON:0002371!9.44e-12!80;UBERON:0001474!8.93e-11!86;UBERON:0000926!9.57e-11!448;UBERON:0004120!9.57e-11!448;UBERON:0006603!9.57e-11!448;UBERON:0004765!7.73e-10!101;UBERON:0001434!7.73e-10!101;UBERON:0000468!1.07e-09!659;UBERON:0002204!1.40e-08!167;UBERON:0002193!7.05e-08!112;UBERON:0000467!1.02e-07!625;UBERON:0000480!1.16e-07!626;UBERON:0002390!2.21e-07!102;UBERON:0003061!2.21e-07!102;UBERON:0000062!4.38e-07!511;UBERON:0000922!8.29e-07!612;UBERON:0000923!9.28e-07!604;UBERON:0005291!9.28e-07!604;UBERON:0006598!9.28e-07!604;UBERON:0002532!9.28e-07!604 | |ontology_enrichment_uberon=UBERON:0002405!2.88e-12!115;UBERON:0002371!9.44e-12!80;UBERON:0001474!8.93e-11!86;UBERON:0000926!9.57e-11!448;UBERON:0004120!9.57e-11!448;UBERON:0006603!9.57e-11!448;UBERON:0004765!7.73e-10!101;UBERON:0001434!7.73e-10!101;UBERON:0000468!1.07e-09!659;UBERON:0002204!1.40e-08!167;UBERON:0002193!7.05e-08!112;UBERON:0000467!1.02e-07!625;UBERON:0000480!1.16e-07!626;UBERON:0002390!2.21e-07!102;UBERON:0003061!2.21e-07!102;UBERON:0000062!4.38e-07!511;UBERON:0000922!8.29e-07!612;UBERON:0000923!9.28e-07!604;UBERON:0005291!9.28e-07!604;UBERON:0006598!9.28e-07!604;UBERON:0002532!9.28e-07!604 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.26e-14,76;UBERON:0001474,2.78e-13,82;UBERON:0004765,6.77e-13,90;UBERON:0001434,2.45e-12,100;UBERON:0002405,3.11e-12,93;UBERON:0000926,2.54e-10,315;UBERON:0004120,2.54e-10,315;UBERON:0006603,2.54e-10,315;UBERON:0002193,2.13e-09,108;UBERON:0002390,3.44e-09,98;UBERON:0003061,3.44e-09,98;UBERON:0002204,2.27e-08,167;UBERON:0003081,1.33e-07,203 | |||
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| ||
|short_description=p@chr11:1774731..1774765,- | |short_description=p@chr11:1774731..1774765,- | ||
}} | }} |
Latest revision as of 20:31, 23 July 2015
Short description: | p@chr11:1774731..1774765, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1774731..1774765, - |
Coexpression cluster: | C587_Osteoblast_Monocytederived_CD14_Macrophage_leiomyoma_Adipocyte_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.27e-16 | 67 |
myeloid lineage restricted progenitor cell | 2.05e-16 | 66 |
myeloid leukocyte | 1.66e-15 | 72 |
monopoietic cell | 2.16e-14 | 59 |
monocyte | 2.16e-14 | 59 |
monoblast | 2.16e-14 | 59 |
promonocyte | 2.16e-14 | 59 |
macrophage dendritic cell progenitor | 4.51e-14 | 61 |
defensive cell | 5.08e-14 | 48 |
phagocyte | 5.08e-14 | 48 |
classical monocyte | 5.31e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.31e-10 | 42 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.26e-14 | 76 |
bone element | 2.78e-13 | 82 |
skeletal element | 6.77e-13 | 90 |
skeletal system | 2.45e-12 | 100 |
immune system | 3.11e-12 | 93 |
mesoderm | 2.54e-10 | 315 |
mesoderm-derived structure | 2.54e-10 | 315 |
presumptive mesoderm | 2.54e-10 | 315 |
hemolymphoid system | 2.13e-09 | 108 |
hematopoietic system | 3.44e-09 | 98 |
blood island | 3.44e-09 | 98 |
musculoskeletal system | 2.27e-08 | 167 |
lateral plate mesoderm | 1.33e-07 | 203 |