FFCP PHASE1:Hg19::chr11:2017929..2017975,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:2017929..2017975,+ | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_at_chr11:2017929..2017975,+ | |description=CAGE_peak_at_chr11:2017929..2017975,+ | ||
|id=chr11:2017929..2017975,+ | |id=chr11:2017929..2017975,+ | ||
|ontology_enrichment_celltype=CL:0000188!3.59e-08!9 | |ontology_enrichment_celltype=CL:0000188!3.59e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000349;4.01e-19;19!CL:0002577;1.60e-09;3!CL:0002541;5.73e-09;3!CL:0000515;6.50e-08;3!CL:0002564;2.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.40e-19,19;CL:0002577,1.61e-09,3;CL:0002541,6.64e-09,3;CL:0002564,2.26e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.76e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.40e-14!14;UBERON:0000158!2.40e-14!14;UBERON:0001557!4.45e-13!19;UBERON:0001737!9.31e-13!9;UBERON:0003124!9.67e-11!7;UBERON:0000077!4.96e-10!130;UBERON:0000478!1.16e-09!24;UBERON:0003104!1.23e-09!238;UBERON:0009142!1.23e-09!238;UBERON:0001041!2.31e-09!98;UBERON:0004921!4.72e-09!129;UBERON:0004185!4.72e-09!129;UBERON:0004119!2.07e-08!169;UBERON:0000925!2.07e-08!169;UBERON:0006595!2.07e-08!169;UBERON:0001007!2.23e-07!155;UBERON:0001555!2.23e-07!155;UBERON:0007026!2.23e-07!155;UBERON:0000481!4.22e-07!347;UBERON:0001987!6.05e-07!4;UBERON:0004340!6.05e-07!4;UBERON:0004923!6.62e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.30e-23;9!UBERON:0001557;8.30e-23;9!UBERON:0000478;7.44e-20;24!UBERON:0005631;4.88e-17;10!UBERON:0000158;4.88e-17;10!UBERON:0001134;9.62e-17;16!UBERON:0002036;9.62e-17;16!UBERON:0001987;8.82e-12;4!UBERON:0000305;3.49e-10;7!UBERON:0003124;5.73e-09;3!UBERON:0000920;5.73e-09;3!UBERON:0001723;1.41e-08;3!UBERON:0001033;1.41e-08;3!UBERON:0011135;2.09e-07;5!UBERON:0002216;2.09e-07;5!UBERON:0011134;2.09e-07;5!UBERON:0002209;2.09e-07;5!UBERON:0002213;2.09e-07;5!UBERON:0007844;2.09e-07;5!UBERON:0011138;2.09e-07;5!UBERON:0001130;2.09e-07;5!UBERON:0001066;2.09e-07;5!UBERON:0001468;2.09e-07;5!UBERON:0002385;2.25e-07;31!UBERON:0001015;2.25e-07;31!UBERON:0000383;2.25e-07;31!UBERON:0002242;2.42e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.36e-27,14;UBERON:0000158,9.36e-27,14;UBERON:0001737,8.02e-23,9;UBERON:0000478,8.22e-20,24;UBERON:0003124,5.50e-19,7;UBERON:0001557,1.16e-17,19;UBERON:0001987,8.60e-12,4;UBERON:0004340,8.60e-12,4;UBERON:0000305,3.50e-10,7;UBERON:0000920,6.64e-09,3;UBERON:0004871,7.65e-09,8;UBERON:0001723,1.27e-08,3;UBERON:0001033,1.27e-08,3;UBERON:0010056,1.27e-08,3;UBERON:0000072,1.17e-07,47;UBERON:0011135,2.01e-07,5;UBERON:0002216,2.01e-07,5;UBERON:0011134,2.01e-07,5;UBERON:0002209,2.01e-07,5;UBERON:0002213,2.01e-07,5;UBERON:0005856,2.01e-07,5;UBERON:0005866,2.01e-07,5;UBERON:0005863,2.01e-07,5;UBERON:0007844,2.01e-07,5;UBERON:0011138,2.01e-07,5;UBERON:0001130,2.01e-07,5;UBERON:0001066,2.01e-07,5;UBERON:0001468,2.01e-07,5;UBERON:0002242,2.26e-07,3;UBERON:0003068,2.26e-07,3;UBERON:0002328,2.26e-07,3;UBERON:0004880,2.26e-07,3 | |||
|phase1_expression=1.99846217197612,0.856402095563933,0.281908808191942,3.00219895059391,0.446961094427288,8.72338524100369,2.53299878168311,0,0,0.245733936501509,1.39560233594486,11.7958340950293,14.2434168243365,0.990130823680373,1.32558950291166,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0.77408061658038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0,0,0,0,1.94653948121054,0.189069634328136,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0,0.163461903113459,0.151357427644931,6.33793516927999,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929551542956147,0.10366105501537,0,0,0,0,0,0,0,5.32380600179297,6.57480291304597,10.6044853148732,8.71322384585912,4.79334777003293,8.06720104977729,9.70785418753184,7.84885860501384,9.61867892365976,1.4763109092493,0,1.2347220339942,5.88034845542168,0,0.982827216677626,0,0,0,0,0,0,0,2.40729957412177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857867961948885,50.4638093014042,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,1.44781306667579,3.08214483825575,3.04403637507822,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,1.59498939234882,1.50051156317903,1.08506009479894,0,0,0,0.117141414992713,0.300946099727719,0,3.10419213877515,0,0,0,7.83204629850962,9.60801586670397,0,0,0,42.4378600024763,58.252403828674,32.0533710929461,1.24053903909388,0,2.52594084989766,0.512556597022804,0,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0.325378394664303,1.13345112812495,0,0,0,0,0,3.86682873168488,0.616194468458578,2.14905144616581,1.65403886981437,0.214840489736547,1.16013355131383,0.852266274161009,10.6838442776085,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.38126038784765,0,2.99557291623744,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,2.06322986127554,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,51.0913197338657,36.2296910615819,24.8800168700378,0,0,0,0,0.211125408127993,0.398495976502139,0,0.755798243562828,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,4.30836693166906,2.49888955420619,49.4451797584475,2.01514705484097,44.7749211855653,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0,17.6567082405734,0,0,0,0,0.394584402849391,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,1.35588444468319,0,0,0,0.195551382734803,0,0,20.1807705677952,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.223171457441873,1.34366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,1.52118305591495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,18.550964447711,0,0,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80033317595784,0,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0.970423302570136,0,0.54604819096007,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,7.97127096437334,0,0,0,0.0752103283492573,0,0,12.5715213351083,0,0.295712172434091,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,5.9430588008968,0,0.171488009437418,0,0,0,0,0.39246546425257,0,0.560544326627578,7.30526976407596,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,1.14553434272025,0,0,0,0,0,0.647428837187895,3.4905354331124,12.7579587447202,0.485710993059139,0,0,0,0,0,0,0,1.31135736302374,0,0.490296643507811,0,0,0,0.8453114551668,0,0,0.644578879735772,0,0.178553938605658,0,0,0.730336388246517,0.458729283404541,0,0,0,0,2.645134202577,0.743990036333503,0.924351257262837,9.51778436672336,0,0.109265571963696,0,0,0,0,0,0.606229585745915,0,0,0,1.0661699095049,3.33290204049236,0.0645889098360061,0.0620747142958579,0,0.12729431655633,2.62752345645685,2.61260097476354,13.347098742326,0.404112318087525,0.143444410785353,3.65926392200615,0.0814032686109745,0,0,0,9.38563769613817,0.244482888365733,0.813792356631477,0,0,0 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|phase1_expression=1.99846217197612,0.856402095563933,0.281908808191942,3.00219895059391,0.446961094427288,8.72338524100369,2.53299878168311,0,0,0.245733936501509,1.39560233594486,11.7958340950293,14.2434168243365,0.990130823680373,1.32558950291166,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0.77408061658038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0,0,0,0,1.94653948121054,0.189069634328136,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0,0.163461903113459,0.151357427644931,6.33793516927999,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929551542956147,0.10366105501537,0,0,0,0,0,0,0,5.32380600179297,6.57480291304597,10.6044853148732,8.71322384585912,4.79334777003293,8.06720104977729,9.70785418753184,7.84885860501384,9.61867892365976,1.4763109092493,0,1.2347220339942,5.88034845542168,0,0.982827216677626,0,0,0,0,0,0,0,2.40729957412177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857867961948885,50.4638093014042,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,1.44781306667579,3.08214483825575,3.04403637507822,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,1.59498939234882,1.50051156317903,1.08506009479894,0,0,0,0.117141414992713,0.300946099727719,0,3.10419213877515,0,0,0,7.83204629850962,9.60801586670397,0,0,0,42.4378600024763,58.252403828674,32.0533710929461,1.24053903909388,0,2.52594084989766,0.512556597022804,0,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0.325378394664303,1.13345112812495,0,0,0,0,0,3.86682873168488,0.616194468458578,2.14905144616581,1.65403886981437,0.214840489736547,1.16013355131383,0.852266274161009,10.6838442776085,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.38126038784765,0,2.99557291623744,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,2.06322986127554,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,51.0913197338657,36.2296910615819,24.8800168700378,0,0,0,0,0.211125408127993,0.398495976502139,0,0.755798243562828,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,4.30836693166906,2.49888955420619,49.4451797584475,2.01514705484097,44.7749211855653,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0,17.6567082405734,0,0,0,0,0.394584402849391,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,1.35588444468319,0,0,0,0.195551382734803,0,0,20.1807705677952,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.223171457441873,1.34366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,1.52118305591495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,18.550964447711,0,0,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80033317595784,0,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0.970423302570136,0,0.54604819096007,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,7.97127096437334,0,0,0,0.0752103283492573,0,0,12.5715213351083,0,0.295712172434091,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,5.9430588008968,0,0.171488009437418,0,0,0,0,0.39246546425257,0,0.560544326627578,7.30526976407596,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,1.14553434272025,0,0,0,0,0,0.647428837187895,3.4905354331124,12.7579587447202,0.485710993059139,0,0,0,0,0,0,0,1.31135736302374,0,0.490296643507811,0,0,0,0.8453114551668,0,0,0.644578879735772,0,0.178553938605658,0,0,0.730336388246517,0.458729283404541,0,0,0,0,2.645134202577,0.743990036333503,0.924351257262837,9.51778436672336,0,0.109265571963696,0,0,0,0,0,0.606229585745915,0,0,0,1.0661699095049,3.33290204049236,0.0645889098360061,0.0620747142958579,0,0.12729431655633,2.62752345645685,2.61260097476354,13.347098742326,0.404112318087525,0.143444410785353,3.65926392200615,0.0814032686109745,0,0,0,9.38563769613817,0.244482888365733,0.813792356631477,0,0,0 | ||
|short_description=p@chr11:2017929..2017975,+ | |short_description=p@chr11:2017929..2017975,+ | ||
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Latest revision as of 20:55, 23 July 2015
Short description: | p@chr11:2017929..2017975, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:2017929..2017975, + |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.40e-19 | 19 |
placental epithelial cell | 1.61e-09 | 3 |
chorionic membrane mesenchymal stem cell | 6.64e-09 | 3 |
nucleus pulposus cell of intervertebral disc | 2.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.36e-27 | 14 |
membranous layer | 9.36e-27 | 14 |
larynx | 8.02e-23 | 9 |
extraembryonic structure | 8.22e-20 | 24 |
chorion | 5.50e-19 | 7 |
upper respiratory tract | 1.16e-17 | 19 |
placenta | 8.60e-12 | 4 |
allantois | 8.60e-12 | 4 |
amnion | 3.50e-10 | 7 |
egg chorion | 6.64e-09 | 3 |
somatic layer of lateral plate mesoderm | 7.65e-09 | 8 |
tongue | 1.27e-08 | 3 |
gustatory system | 1.27e-08 | 3 |
future tongue | 1.27e-08 | 3 |
segment of respiratory tract | 1.17e-07 | 47 |
intervertebral cartilage | 2.01e-07 | 5 |
symphysis | 2.01e-07 | 5 |
nonsynovial joint | 2.01e-07 | 5 |
fibrous joint | 2.01e-07 | 5 |
cartilaginous joint | 2.01e-07 | 5 |
developing mesenchymal condensation | 2.01e-07 | 5 |
pre-cartilage condensation | 2.01e-07 | 5 |
cartilaginous condensation | 2.01e-07 | 5 |
cartilage element | 2.01e-07 | 5 |
post-cranial axial skeletal system | 2.01e-07 | 5 |
vertebral column | 2.01e-07 | 5 |
intervertebral disk | 2.01e-07 | 5 |
intervertebral joint | 2.01e-07 | 5 |
nucleus pulposus | 2.26e-07 | 3 |
axial mesoderm | 2.26e-07 | 3 |
notochord | 2.26e-07 | 3 |
chordamesoderm | 2.26e-07 | 3 |