FFCP PHASE1:Hg19::chr11:2150461..2150472,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_BC104421_5end | |||
|cluster_id=chr11:2150461..2150472,+ | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_5_at_BC104421_5end | |||
|id=chr11:2150461..2150472,+ | |||
|ontology_enrichment_celltype=CL:0000349!3.35e-12!3;CL:0002577!3.35e-12!3;CL:0002541!4.18e-12!3;CL:0002536!1.93e-08!2;CL:0002575!3.84e-08!2;CL:0002537!1.95e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000349;4.03e-34;19!CL:0002541;2.49e-25;3!CL:0002577;4.31e-25;3!CL:0002581;3.91e-19;1!CL:0002537;2.09e-15;5!CL:0002615;2.32e-07;3!CL:0000134;2.65e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.39e-34,19;CL:0002541,2.34e-25,3;CL:0002577,3.38e-25,3;CL:0002581,3.91e-19,1;CL:0002537,2.02e-15,5;CL:0002615,2.32e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.17e-36!14;UBERON:0000158!3.17e-36!14;UBERON:0003124!1.48e-25!7;UBERON:0000478!1.82e-23!24;UBERON:0001987!3.37e-15!4;UBERON:0004340!3.37e-15!4;UBERON:0000305!2.22e-13!7;UBERON:0000476!4.18e-12!3;UBERON:0000920!4.18e-12!3;UBERON:0004871!1.17e-11!8;UBERON:0004923!5.85e-11!57;UBERON:0005406!1.15e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.54e-29;10!UBERON:0000158;2.54e-29;10!UBERON:0000478;5.03e-27;24!UBERON:0003124;2.49e-25;3!UBERON:0000920;2.49e-25;3!UBERON:0002426;2.25e-19;1!UBERON:0003831;2.25e-19;1!UBERON:0003898;2.25e-19;1!UBERON:0004830;2.25e-19;1!UBERON:0003830;2.25e-19;1!UBERON:0005175;2.25e-19;1!UBERON:0001774;2.25e-19;1!UBERON:0001103;2.25e-19;1!UBERON:0001987;4.29e-19;4!UBERON:0000305;2.76e-11;7!UBERON:0005090;2.27e-10;2!UBERON:0001630;2.27e-10;2!UBERON:0005406;2.99e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.29e-46,14;UBERON:0000158,2.29e-46,14;UBERON:0003124,7.18e-42,7;UBERON:0000478,4.39e-27,24;UBERON:0000920,2.34e-25,3;UBERON:0002426,2.25e-19,1;UBERON:0003831,2.25e-19,1;UBERON:0003898,2.25e-19,1;UBERON:0004830,2.25e-19,1;UBERON:0003830,2.25e-19,1;UBERON:0005175,2.25e-19,1;UBERON:0001774,2.25e-19,1;UBERON:0001103,2.25e-19,1;UBERON:0010084,2.25e-19,1;UBERON:0001987,3.57e-19,4;UBERON:0004340,3.57e-19,4;UBERON:0004923,3.45e-13,66;UBERON:0000305,2.69e-11,7;UBERON:0005090,2.27e-10,2;UBERON:0001630,2.27e-10,2;UBERON:0005406,2.99e-10,2;UBERON:0004871,5.29e-10,8 | |||
|phase1_expression=0,0,0,3.00219895059391,0,0.872338524100369,0,0,0,0,0,0.655324116390517,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0.686286847621712,0,0,0,0.606255142892519,8.32177197552485,1.81434175997808,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7748896947538,1.48482340416319,0.614321404198464,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78501739597879,0.274792780205587,5.33034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999048047910651,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0.393709926058995,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0.198950775161368,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684466602170562,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p5@BC104421 | |||
}} |
Latest revision as of 20:59, 23 July 2015
Short description: | p5@BC104421 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BC104421_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -11bp_to_BC104421_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.39e-34 | 19 |
chorionic membrane mesenchymal stem cell | 2.34e-25 | 3 |
placental epithelial cell | 3.38e-25 | 3 |
perirenal preadipocyte | 3.91e-19 | 1 |
amnion mesenchymal stem cell | 2.02e-15 | 5 |
adipocyte of omentum tissue | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.29e-46 | 14 |
membranous layer | 2.29e-46 | 14 |
chorion | 7.18e-42 | 7 |
extraembryonic structure | 4.39e-27 | 24 |
egg chorion | 2.34e-25 | 3 |
chest muscle | 2.25e-19 | 1 |
respiratory system muscle | 2.25e-19 | 1 |
skeletal muscle of trunk | 2.25e-19 | 1 |
respiratory system skeletal muscle | 2.25e-19 | 1 |
thoracic segment muscle | 2.25e-19 | 1 |
chest organ | 2.25e-19 | 1 |
muscle of trunk | 2.25e-19 | 1 |
diaphragm | 2.25e-19 | 1 |
future diaphragm | 2.25e-19 | 1 |
placenta | 3.57e-19 | 4 |
allantois | 3.57e-19 | 4 |
organ component layer | 3.45e-13 | 66 |
amnion | 2.69e-11 | 7 |
muscle structure | 2.27e-10 | 2 |
muscle organ | 2.27e-10 | 2 |
perirenal fat | 2.99e-10 | 2 |
somatic layer of lateral plate mesoderm | 5.29e-10 | 8 |