FFCP PHASE1:Hg19::chr11:2154002..2154014,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:2154002..2154014,+
|short_description=p3@BC021076
|description=CAGE_peak_3_at_BC021076_5end
|association_with_transcript=78bp_to_BC021076_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=78bp_to_BC021076_5end | |||
|cluster_id=chr11:2154002..2154014,+ | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_3_at_BC021076_5end | |||
|id=chr11:2154002..2154014,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;6.29e-25;19!CL:0002577;3.99e-13;3!CL:0002575;5.28e-10;2!CL:0002536;1.41e-09;2!CL:0002549;1.05e-08;2!CL:0002537;4.14e-08;5!CL:0002541;6.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.78e-25,19;CL:0002577,2.34e-13,3;CL:0002575,5.29e-10,2;CL:0002536,1.41e-09,2;CL:0002549,9.33e-09,2;CL:0002537,4.24e-08,5;CL:0002541,6.78e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.84e-09;11!UBERON:0009497;1.10e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.00e-17!14;UBERON:0000158!5.00e-17!14;UBERON:0000478!1.37e-11!24;UBERON:0003124!1.14e-10!7;UBERON:0000305!4.26e-08!7;UBERON:0001987!4.98e-07!4;UBERON:0004340!4.98e-07!4;UBERON:0004871!6.29e-07!8;UBERON:0004923!7.19e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;5.02e-27;24!UBERON:0005631;3.44e-20;10!UBERON:0000158;3.44e-20;10!UBERON:0001987;1.30e-16;4!UBERON:0000305;5.68e-15;7!UBERON:0005629;1.05e-08;2!UBERON:0005358;1.05e-08;2!UBERON:0001886;1.05e-08;2!UBERON:0004086;1.05e-08;2!UBERON:0005282;1.05e-08;2!UBERON:0005281;1.05e-08;2!UBERON:0002107;3.97e-07;19!UBERON:0006925;3.97e-07;19!UBERON:0003124;6.86e-07;3!UBERON:0000920;6.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.33e-34,14;UBERON:0000158,2.33e-34,14;UBERON:0000478,3.97e-27,24;UBERON:0003124,2.30e-21,7;UBERON:0001987,8.03e-17,4;UBERON:0004340,8.03e-17,4;UBERON:0000305,5.87e-15,7;UBERON:0004871,4.74e-13,8;UBERON:0005629,9.33e-09,2;UBERON:0005358,9.33e-09,2;UBERON:0001886,9.33e-09,2;UBERON:0004086,9.33e-09,2;UBERON:0005282,9.33e-09,2;UBERON:0005281,9.33e-09,2;UBERON:0004923,7.75e-08,66;UBERON:0002107,3.75e-07,19;UBERON:0006925,3.75e-07,19;UBERON:0008836,3.75e-07,19;UBERON:0000920,6.78e-07,3 | |||
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| ||
|short_description=p3@BC021076 | |||
}} | }} |
Latest revision as of 21:01, 23 July 2015
Short description: | p3@BC021076 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BC021076_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 78bp_to_BC021076_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.78e-25 | 19 |
placental epithelial cell | 2.34e-13 | 3 |
central nervous system pericyte | 5.29e-10 | 2 |
amniotic epithelial cell | 1.41e-09 | 2 |
fibroblast of choroid plexus | 9.33e-09 | 2 |
amnion mesenchymal stem cell | 4.24e-08 | 5 |
chorionic membrane mesenchymal stem cell | 6.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.33e-34 | 14 |
membranous layer | 2.33e-34 | 14 |
extraembryonic structure | 3.97e-27 | 24 |
chorion | 2.30e-21 | 7 |
placenta | 8.03e-17 | 4 |
allantois | 8.03e-17 | 4 |
amnion | 5.87e-15 | 7 |
somatic layer of lateral plate mesoderm | 4.74e-13 | 8 |
vascular plexus | 9.33e-09 | 2 |
ventricle of nervous system | 9.33e-09 | 2 |
choroid plexus | 9.33e-09 | 2 |
brain ventricle | 9.33e-09 | 2 |
ventricular system of brain | 9.33e-09 | 2 |
ventricular system of central nervous system | 9.33e-09 | 2 |
organ component layer | 7.75e-08 | 66 |
liver | 3.75e-07 | 19 |
digestive gland | 3.75e-07 | 19 |
liver bud | 3.75e-07 | 19 |
egg chorion | 6.78e-07 | 3 |