FFCP PHASE1:Hg19::chr11:2160354..2160387,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:2160354..2160387,+ to FFCP PHASE1:Hg19::chr11:2160354..2160387,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=339bp_to_BC017277_5end | |||
|cluster_id=chr11:2160354..2160387,+ | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_1_at_BC017277_5end | |||
|id=chr11:2160354..2160387,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;8.02e-17;19!CL:0000244;1.46e-07;4!CL:0000731;1.46e-07;4!CL:0002541;2.04e-07;3!CL:0002577;2.26e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.22e-17,19;CL:0000244,8.03e-08,4;CL:0000731,8.03e-08,4;CL:0002541,2.07e-07,3;CL:0002577,2.29e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;8.23e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.30e-14!115;UBERON:0000481!7.20e-12!347;UBERON:0005631!2.34e-11!14;UBERON:0000158!2.34e-11!14;UBERON:0004119!5.14e-10!169;UBERON:0000925!5.14e-10!169;UBERON:0006595!5.14e-10!169;UBERON:0000478!1.46e-09!24;UBERON:0003124!8.20e-09!7;UBERON:0000468!7.86e-08!659;UBERON:0000119!1.18e-07!312;UBERON:0000483!1.32e-07!309;UBERON:0000922!2.77e-07!612;UBERON:0000064!5.07e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;3.22e-17;24!UBERON:0005631;2.22e-13;10!UBERON:0000158;2.22e-13;10!UBERON:0000922;1.78e-12;49!UBERON:0001987;2.39e-09;4!UBERON:0000365;6.38e-09;5!UBERON:0000305;5.33e-08;7!UBERON:0003124;2.04e-07;3!UBERON:0000920;2.04e-07;3!UBERON:0005910;2.27e-07;6!UBERON:0005409;8.58e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.57e-21,14;UBERON:0000158,8.57e-21,14;UBERON:0000478,3.28e-17,24;UBERON:0003124,4.43e-15,7;UBERON:0001987,2.43e-09,4;UBERON:0004340,2.43e-09,4;UBERON:0000365,3.24e-09,5;UBERON:0000305,5.36e-08,7;UBERON:0005910,1.31e-07,6;UBERON:0000920,2.07e-07,3;UBERON:0005409,5.40e-07,25;UBERON:0004871,6.42e-07,8;UBERON:0004119,6.99e-07,160;UBERON:0000925,6.99e-07,160;UBERON:0006595,6.99e-07,160 | |||
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| ||
|short_description=p1@BC017277 | |||
}} | }} |
Latest revision as of 21:04, 23 July 2015
Short description: | p1@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 339bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.22e-17 | 19 |
transitional epithelial cell | 8.03e-08 | 4 |
urothelial cell | 8.03e-08 | 4 |
chorionic membrane mesenchymal stem cell | 2.07e-07 | 3 |
placental epithelial cell | 2.29e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.57e-21 | 14 |
membranous layer | 8.57e-21 | 14 |
extraembryonic structure | 3.28e-17 | 24 |
chorion | 4.43e-15 | 7 |
placenta | 2.43e-09 | 4 |
allantois | 2.43e-09 | 4 |
urothelium | 3.24e-09 | 5 |
amnion | 5.36e-08 | 7 |
transitional epithelium | 1.31e-07 | 6 |
egg chorion | 2.07e-07 | 3 |
gastrointestinal system | 5.40e-07 | 25 |
somatic layer of lateral plate mesoderm | 6.42e-07 | 8 |
endoderm-derived structure | 6.99e-07 | 160 |
endoderm | 6.99e-07 | 160 |
presumptive endoderm | 6.99e-07 | 160 |