FFCP PHASE1:Hg19::chr11:28779323..28779364,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:28779323..28779364,- | |||
|coexpression_cluster_id=C91 | |coexpression_cluster_id=C91 | ||
|description=CAGE_peak_at_chr11:28779323..28779364,- | |description=CAGE_peak_at_chr11:28779323..28779364,- | ||
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|ontology_enrichment_celltype=CL:0000077!4.58e-28!19;CL:0000222!1.71e-19!119;CL:0000055!6.71e-13!180;CL:0000213!7.63e-13!57;CL:0000215!7.63e-13!57;CL:0000076!4.07e-11!62;CL:0000359!5.26e-11!32;CL:0000192!6.75e-11!42;CL:0000514!6.75e-11!42;CL:0000220!3.74e-10!246;CL:0002321!5.81e-10!248;CL:0000548!3.18e-09!679;CL:0000004!3.18e-09!679;CL:0000255!3.18e-09!679;CL:0000012!4.51e-09!682;CL:0000680!9.21e-09!57;CL:0000056!9.21e-09!57;CL:0000355!9.21e-09!57;CL:0002594!1.21e-08!4;CL:0000144!1.29e-08!625;CL:0000187!2.21e-08!54;CL:0000183!2.82e-07!59;CL:0000003!3.59e-07!722;CL:0000393!4.44e-07!60;CL:0000211!4.44e-07!60 | |ontology_enrichment_celltype=CL:0000077!4.58e-28!19;CL:0000222!1.71e-19!119;CL:0000055!6.71e-13!180;CL:0000213!7.63e-13!57;CL:0000215!7.63e-13!57;CL:0000076!4.07e-11!62;CL:0000359!5.26e-11!32;CL:0000192!6.75e-11!42;CL:0000514!6.75e-11!42;CL:0000220!3.74e-10!246;CL:0002321!5.81e-10!248;CL:0000548!3.18e-09!679;CL:0000004!3.18e-09!679;CL:0000255!3.18e-09!679;CL:0000012!4.51e-09!682;CL:0000680!9.21e-09!57;CL:0000056!9.21e-09!57;CL:0000355!9.21e-09!57;CL:0002594!1.21e-08!4;CL:0000144!1.29e-08!625;CL:0000187!2.21e-08!54;CL:0000183!2.82e-07!59;CL:0000003!3.59e-07!722;CL:0000393!4.44e-07!60;CL:0000211!4.44e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002593;2.59e-12;2!CL:0000077;4.52e-11;19!CL:1000306;6.50e-07;4!CL:0002547;6.50e-07;4!CL:0000306;8.61e-07;4!CL:0002222;8.61e-07;4!CL:0002224;8.61e-07;4 | |ontology_enrichment_celltype_v019=CL:0002593;2.59e-12;2!CL:0000077;4.52e-11;19!CL:1000306;6.50e-07;4!CL:0002547;6.50e-07;4!CL:0000306;8.61e-07;4!CL:0002222;8.61e-07;4!CL:0002224;8.61e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002593,3.62e-12,2;CL:0000077,4.84e-11,19;CL:1000306,6.50e-07,4;CL:0002547,6.50e-07,4;CL:0000306,8.61e-07,4;CL:0002222,8.61e-07,4;CL:0002224,8.61e-07,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002456,3.62e-12,2;UBERON:0000415,6.50e-07,4;UBERON:0007240,6.50e-07,4;UBERON:0005742,6.50e-07,4;UBERON:0005734,6.50e-07,4;UBERON:0004664,6.50e-07,4;UBERON:0004663,6.50e-07,4;UBERON:0010077,8.61e-07,4;UBERON:0005389,8.61e-07,4;UBERON:0000484,8.61e-07,4;UBERON:0002546,8.61e-07,4;UBERON:0000965,8.61e-07,4;UBERON:0001803,8.61e-07,4;UBERON:0003073,8.61e-07,4;UBERON:0005426,8.61e-07,4 | |||
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|short_description=p@chr11:28779323..28779364,- | |short_description=p@chr11:28779323..28779364,- | ||
}} | }} |
Latest revision as of 21:20, 23 July 2015
Short description: | p@chr11:28779323..28779364, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:28779323..28779364, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 3.62e-12 | 2 |
mesothelial cell | 4.84e-11 | 19 |
fibroblast of tunica adventitia of artery | 6.50e-07 | 4 |
fibroblast of the aortic adventitia | 6.50e-07 | 4 |
crystallin accumulating cell | 8.61e-07 | 4 |
vertebrate lens cell | 8.61e-07 | 4 |
lens epithelial cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 3.62e-12 | 2 |
artery wall | 6.50e-07 | 4 |
tunica adventitia of artery | 6.50e-07 | 4 |
adventitia | 6.50e-07 | 4 |
tunica adventitia of blood vessel | 6.50e-07 | 4 |
aorta tunica adventitia | 6.50e-07 | 4 |
aorta wall | 6.50e-07 | 4 |
cuboidal epithelium | 8.61e-07 | 4 |
transparent eye structure | 8.61e-07 | 4 |
simple cuboidal epithelium | 8.61e-07 | 4 |
cranial placode | 8.61e-07 | 4 |
lens of camera-type eye | 8.61e-07 | 4 |
epithelium of lens | 8.61e-07 | 4 |
lens placode | 8.61e-07 | 4 |
lens vesicle | 8.61e-07 | 4 |