FFCP PHASE1:Hg19::chr12:103572345..103572350,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-166bp_to_ENST00000548415_5end | |association_with_transcript=-166bp_to_ENST00000548415_5end | ||
|cluster_id=chr12:103572345..103572350,- | |||
|coexpression_cluster_id=C74 | |coexpression_cluster_id=C74 | ||
|description=CAGE_peak_5_at_ENST00000548415_5end | |description=CAGE_peak_5_at_ENST00000548415_5end | ||
|id=chr12:103572345..103572350,- | |id=chr12:103572345..103572350,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.78e-29;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.81e-21;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.81e-21,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.20e-43!57;UBERON:0005068!2.20e-43!57;UBERON:0006241!2.20e-43!57;UBERON:0007135!2.20e-43!57;UBERON:0003076!8.53e-38!15;UBERON:0003057!8.53e-38!15;UBERON:0002298!2.99e-36!8;UBERON:0006331!9.82e-36!3;UBERON:0002616!4.49e-31!59;UBERON:0001017!2.00e-29!82;UBERON:0003075!2.38e-28!86;UBERON:0007284!2.38e-28!86;UBERON:0005743!5.24e-28!86;UBERON:0002346!5.03e-27!90;UBERON:0000955!5.16e-26!69;UBERON:0006238!5.16e-26!69;UBERON:0000073!3.04e-25!94;UBERON:0001016!3.04e-25!94;UBERON:0001897!1.45e-24!2;UBERON:0002148!1.45e-24!2;UBERON:0009662!1.45e-24!2;UBERON:0004733!2.48e-24!12;UBERON:0002028!2.48e-24!12;UBERON:0007277!2.48e-24!12;UBERON:0004732!1.83e-22!13;UBERON:0007023!5.24e-21!115;UBERON:0002240!5.30e-17!3;UBERON:0002780!6.73e-17!41;UBERON:0001890!6.73e-17!41;UBERON:0006240!6.73e-17!41;UBERON:0000988!1.00e-16!3;UBERON:0003080!1.74e-16!42;UBERON:0001896!2.38e-16!3;UBERON:0005290!2.38e-16!3;UBERON:0010096!2.38e-16!3;UBERON:0002020!9.66e-16!34;UBERON:0003528!9.66e-16!34;UBERON:0000033!4.73e-14!123;UBERON:0004121!2.05e-13!169;UBERON:0000153!2.50e-13!129;UBERON:0007811!2.50e-13!129;UBERON:0000924!4.59e-13!173;UBERON:0006601!4.59e-13!173;UBERON:0002038!5.38e-13!1;UBERON:0009661!5.38e-13!1;UBERON:0002336!7.68e-13!1;UBERON:0001018!7.68e-13!1;UBERON:0002473!7.68e-13!1;UBERON:0005340!7.68e-13!1;UBERON:0002316!7.68e-13!1;UBERON:0003544!7.68e-13!1;UBERON:0001020!7.68e-13!1;UBERON:0005970!7.68e-13!1;UBERON:0002437!7.68e-13!1;UBERON:0002680!1.84e-12!9;UBERON:0001895!1.84e-12!9;UBERON:0010092!1.84e-12!9;UBERON:0002308!2.32e-12!9;UBERON:0000125!2.32e-12!9;UBERON:0002791!5.91e-12!33;UBERON:0001893!1.33e-11!34;UBERON:0000025!1.34e-11!194;UBERON:0003056!3.50e-11!61;UBERON:0005174!1.40e-10!5;UBERON:0001137!1.40e-10!5;UBERON:0001872!3.42e-10!5;UBERON:0004111!5.99e-09!241;UBERON:0000477!1.81e-08!286;UBERON:0002619!2.39e-08!22;UBERON:0001894!1.09e-07!7;UBERON:0006222!1.09e-07!7;UBERON:0000956!2.10e-07!25;UBERON:0000203!2.10e-07!25;UBERON:0001954!2.91e-07!2;UBERON:0003022!2.91e-07!2;UBERON:0002421!2.91e-07!2;UBERON:0002600!2.91e-07!2;UBERON:0002950!3.93e-07!2;UBERON:0001891!3.93e-07!2;UBERON:0009616!3.93e-07!2;UBERON:0005162!4.69e-07!2;UBERON:0000122!4.69e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!2.20e-43!57;UBERON:0005068!2.20e-43!57;UBERON:0006241!2.20e-43!57;UBERON:0007135!2.20e-43!57;UBERON:0003076!8.53e-38!15;UBERON:0003057!8.53e-38!15;UBERON:0002298!2.99e-36!8;UBERON:0006331!9.82e-36!3;UBERON:0002616!4.49e-31!59;UBERON:0001017!2.00e-29!82;UBERON:0003075!2.38e-28!86;UBERON:0007284!2.38e-28!86;UBERON:0005743!5.24e-28!86;UBERON:0002346!5.03e-27!90;UBERON:0000955!5.16e-26!69;UBERON:0006238!5.16e-26!69;UBERON:0000073!3.04e-25!94;UBERON:0001016!3.04e-25!94;UBERON:0001897!1.45e-24!2;UBERON:0002148!1.45e-24!2;UBERON:0009662!1.45e-24!2;UBERON:0004733!2.48e-24!12;UBERON:0002028!2.48e-24!12;UBERON:0007277!2.48e-24!12;UBERON:0004732!1.83e-22!13;UBERON:0007023!5.24e-21!115;UBERON:0002240!5.30e-17!3;UBERON:0002780!6.73e-17!41;UBERON:0001890!6.73e-17!41;UBERON:0006240!6.73e-17!41;UBERON:0000988!1.00e-16!3;UBERON:0003080!1.74e-16!42;UBERON:0001896!2.38e-16!3;UBERON:0005290!2.38e-16!3;UBERON:0010096!2.38e-16!3;UBERON:0002020!9.66e-16!34;UBERON:0003528!9.66e-16!34;UBERON:0000033!4.73e-14!123;UBERON:0004121!2.05e-13!169;UBERON:0000153!2.50e-13!129;UBERON:0007811!2.50e-13!129;UBERON:0000924!4.59e-13!173;UBERON:0006601!4.59e-13!173;UBERON:0002038!5.38e-13!1;UBERON:0009661!5.38e-13!1;UBERON:0002336!7.68e-13!1;UBERON:0001018!7.68e-13!1;UBERON:0002473!7.68e-13!1;UBERON:0005340!7.68e-13!1;UBERON:0002316!7.68e-13!1;UBERON:0003544!7.68e-13!1;UBERON:0001020!7.68e-13!1;UBERON:0005970!7.68e-13!1;UBERON:0002437!7.68e-13!1;UBERON:0002680!1.84e-12!9;UBERON:0001895!1.84e-12!9;UBERON:0010092!1.84e-12!9;UBERON:0002308!2.32e-12!9;UBERON:0000125!2.32e-12!9;UBERON:0002791!5.91e-12!33;UBERON:0001893!1.33e-11!34;UBERON:0000025!1.34e-11!194;UBERON:0003056!3.50e-11!61;UBERON:0005174!1.40e-10!5;UBERON:0001137!1.40e-10!5;UBERON:0001872!3.42e-10!5;UBERON:0004111!5.99e-09!241;UBERON:0000477!1.81e-08!286;UBERON:0002619!2.39e-08!22;UBERON:0001894!1.09e-07!7;UBERON:0006222!1.09e-07!7;UBERON:0000956!2.10e-07!25;UBERON:0000203!2.10e-07!25;UBERON:0001954!2.91e-07!2;UBERON:0003022!2.91e-07!2;UBERON:0002421!2.91e-07!2;UBERON:0002600!2.91e-07!2;UBERON:0002950!3.93e-07!2;UBERON:0001891!3.93e-07!2;UBERON:0009616!3.93e-07!2;UBERON:0005162!4.69e-07!2;UBERON:0000122!4.69e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.39e-66;3!UBERON:0004177;1.48e-40;5!UBERON:0005057;1.48e-40;5!UBERON:0002075;1.85e-12;18!UBERON:0000077;8.32e-09;27!UBERON:0002405;8.32e-09;27!UBERON:0002323;4.53e-08;45!UBERON:0002390;2.32e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.39e-66,3;UBERON:0004854,2.39e-66,3;UBERON:0009034,2.39e-66,3;UBERON:0002095,2.39e-66,3;UBERON:0004782,2.39e-66,3;UBERON:0003281,2.39e-66,3;UBERON:0009664,2.39e-66,3;UBERON:0002296,2.39e-66,3;UBERON:0005602,2.39e-66,3;UBERON:0001179,2.39e-66,3;UBERON:0006293,2.39e-66,3;UBERON:0004177,1.78e-29,7;UBERON:0005057,1.78e-29,7;UBERON:0000945,5.22e-26,8;UBERON:0010039,5.22e-26,8;UBERON:0004457,6.76e-18,12;UBERON:0000042,6.76e-18,12;UBERON:0003887,6.76e-18,12;UBERON:0002075,1.85e-12,18;UBERON:0005409,4.34e-09,25;UBERON:0000077,2.67e-08,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.297046400327086,0,0,0,0,2.49852889812322,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.297046400327086,0,0,0,0,2.49852889812322,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@ENST00000548415 | |short_description=p5@ENST00000548415 | ||
}} | }} |
Latest revision as of 04:11, 24 July 2015
Short description: | p5@ENST00000548415 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ENST00000548415_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | -166bp_to_ENST00000548415_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 2.39e-66 | 3 |
gastrointestinal system mesentery | 2.39e-66 | 3 |
stomach region | 2.39e-66 | 3 |
mesentery | 2.39e-66 | 3 |
gastrointestinal system serosa | 2.39e-66 | 3 |
mesentery of stomach | 2.39e-66 | 3 |
gut mesentery | 2.39e-66 | 3 |
dorsal mesentery | 2.39e-66 | 3 |
dorsal mesogastrium | 2.39e-66 | 3 |
peritoneal cavity | 2.39e-66 | 3 |
spleen primordium | 2.39e-66 | 3 |
hemopoietic organ | 1.78e-29 | 7 |
immune organ | 1.78e-29 | 7 |
stomach | 5.22e-26 | 8 |
food storage organ | 5.22e-26 | 8 |
cavity lining | 6.76e-18 | 12 |
serous membrane | 6.76e-18 | 12 |
intraembryonic coelom | 6.76e-18 | 12 |
viscus | 1.85e-12 | 18 |
gastrointestinal system | 4.34e-09 | 25 |
mixed endoderm/mesoderm-derived structure | 2.67e-08 | 29 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.81e-21 | 10 |