FFCP PHASE1:Hg19::chr12:114846774..114846789,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=215bp_to_ENST00000528549,uc001tvs.1_5end | |association_with_transcript=215bp_to_ENST00000528549,uc001tvs.1_5end | ||
|cluster_id=chr12:114846774..114846789,+ | |||
|description=CAGE_peak_3_at_ENST00000528549_5end,CAGE_peak_3_at_uc001tvs.1_5end | |description=CAGE_peak_3_at_ENST00000528549_5end,CAGE_peak_3_at_uc001tvs.1_5end | ||
|id=chr12:114846774..114846789,+ | |id=chr12:114846774..114846789,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.37e-23!75;CL:0002620!1.55e-23!23;CL:0000055!5.83e-16!180;CL:0002494!1.14e-14!16;CL:0002334!3.32e-12!12;CL:0000569!2.65e-07!4;CL:0000011!2.65e-07!4;CL:0002580!3.75e-07!3;CL:0000746!5.16e-07!3;CL:0000513!5.16e-07!3 | |ontology_enrichment_celltype=CL:0000057!1.37e-23!75;CL:0002620!1.55e-23!23;CL:0000055!5.83e-16!180;CL:0002494!1.14e-14!16;CL:0002334!3.32e-12!12;CL:0000569!2.65e-07!4;CL:0000011!2.65e-07!4;CL:0002580!3.75e-07!3;CL:0000746!5.16e-07!3;CL:0000513!5.16e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002620;7.33e-17;23!CL:0002617;7.50e-14;2!CL:0002580;1.56e-09;3!CL:0002334;9.22e-09;12!CL:0002591;3.31e-08;1!CL:0002574;9.07e-08;1!CL:0002599;9.07e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,7.39e-17,23;CL:0002617,6.62e-14,2;CL:0000057,8.50e-14,76;CL:0002580,1.11e-09,3;CL:0002334,1.18e-08,12;CL:0002591,3.10e-08,1;CL:0002599,4.07e-08,1;CL:0002574,1.26e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0004140;9.07e-08;1 | |||
|ontology_enrichment_disease=DOID:17!9.09e-11!5;DOID:450!9.09e-11!5;DOID:66!9.09e-11!5;DOID:423!9.09e-11!5;DOID:0080000!9.09e-11!5;DOID:11722!9.09e-11!5 | |ontology_enrichment_disease=DOID:17!9.09e-11!5;DOID:450!9.09e-11!5;DOID:66!9.09e-11!5;DOID:423!9.09e-11!5;DOID:0080000!9.09e-11!5;DOID:11722!9.09e-11!5 | ||
|ontology_enrichment_disease_v019=DOID:17;3.99e-21;5!DOID:450;3.99e-21;5!DOID:66;3.99e-21;5!DOID:423;3.99e-21;5!DOID:0080000;3.99e-21;5!DOID:11722;3.99e-21;5!DOID:114;7.50e-14;2!DOID:178;9.07e-08;1!DOID:326;9.07e-08;1!DOID:3978;9.07e-08;1!DOID:3394;9.07e-08;1!DOID:5844;9.07e-08;1!DOID:1287;2.34e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.24e-21,5;DOID:450,4.24e-21,5;DOID:66,4.24e-21,5;DOID:423,4.24e-21,5;DOID:0080000,4.24e-21,5;DOID:11722,4.24e-21,5;DOID:114,8.60e-14,2;DOID:178,1.11e-07,1;DOID:326,1.11e-07,1;DOID:3978,1.11e-07,1;DOID:3394,1.11e-07,1;DOID:5844,1.11e-07,1;DOID:1287,2.50e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!3.40e-29!27;UBERON:0000948!6.51e-24!24;UBERON:0005498!6.51e-24!24;UBERON:0004140!6.51e-24!24;UBERON:0009881!6.51e-24!24;UBERON:0004141!6.51e-24!24;UBERON:0003084!6.51e-24!24;UBERON:0007005!6.51e-24!24;UBERON:0004139!6.51e-24!24;UBERON:0004291!6.51e-24!24;UBERON:0002199!3.42e-15!45;UBERON:0002416!3.42e-15!45;UBERON:0002097!8.51e-13!40;UBERON:0003103!8.79e-13!69;UBERON:0003102!2.74e-08!95;UBERON:0004872!6.22e-08!84;UBERON:0001009!7.83e-07!113 | |ontology_enrichment_uberon=UBERON:0007100!3.40e-29!27;UBERON:0000948!6.51e-24!24;UBERON:0005498!6.51e-24!24;UBERON:0004140!6.51e-24!24;UBERON:0009881!6.51e-24!24;UBERON:0004141!6.51e-24!24;UBERON:0003084!6.51e-24!24;UBERON:0007005!6.51e-24!24;UBERON:0004139!6.51e-24!24;UBERON:0004291!6.51e-24!24;UBERON:0002199!3.42e-15!45;UBERON:0002416!3.42e-15!45;UBERON:0002097!8.51e-13!40;UBERON:0003103!8.79e-13!69;UBERON:0003102!2.74e-08!95;UBERON:0004872!6.22e-08!84;UBERON:0001009!7.83e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;7.08e-12;25!UBERON:0000310;1.73e-10;10!UBERON:0001443;1.51e-09;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.04e-14,27;UBERON:0000310,1.35e-10,10;UBERON:0001443,1.21e-09,11;UBERON:0002097,5.85e-09,41;UBERON:0002199,7.31e-08,46;UBERON:0002416,7.31e-08,46 | |||
|phase1_expression=1.45342703416445,1.2846031433459,0,3.00219895059391,0,0,0,0.631719873426831,0,0.491467873003018,0,0,0,0,0,0,0.602694528023977,0.730310090387373,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.895037932904712,1.0843174571537,0,0,0,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,1.48000529050296,0.311211035399766,0.808264032418128,0.653847612453835,0,0,0,0,0,0.597794722207204,0.587172493218824,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.538168907066586,1.06778694409284,1.27159140695737,1.80054657650641,2.06105058476878,0.772921620136887,0.930584281657949,1.0126579934476,0.974370051611986,0.252433774244115,1.19664868234989,0,0.355009592516614,1.61203357164224,1.86516651541536,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,1.12948698808508,0,0,0,0,0,0,0,0,1.24053903909388,1.84154367945675,0.841980283299221,0,1.02341449813341,0,0,0.925258162815933,0.532685175939381,0.492762936082855,1.03850885836724,0.581051892299796,0,0,0,0.918515585316854,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0.255897791311334,2.1396949401696,0,0,0,0,0,0,0,0.421258456238981,1.95053495635836,0,0,0,0,2.26016233240486,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687944129886466,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,1.19807400299395,1.28767814440971,1.78537165953498,1.61240333968143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640724475406168,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0,0,0,0.251567901752575,0,0.228840068396924,1.05861646634267,0.310874401165561,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0.308801447160972,2.19284049578707,0.530067437837643,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0.853533837553127,0,0,0,0,0,0,0.431299245586727,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.78493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0.490296643507811,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=1.45342703416445,1.2846031433459,0,3.00219895059391,0,0,0,0.631719873426831,0,0.491467873003018,0,0,0,0,0,0,0.602694528023977,0.730310090387373,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.895037932904712,1.0843174571537,0,0,0,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,1.48000529050296,0.311211035399766,0.808264032418128,0.653847612453835,0,0,0,0,0,0.597794722207204,0.587172493218824,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.538168907066586,1.06778694409284,1.27159140695737,1.80054657650641,2.06105058476878,0.772921620136887,0.930584281657949,1.0126579934476,0.974370051611986,0.252433774244115,1.19664868234989,0,0.355009592516614,1.61203357164224,1.86516651541536,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,1.12948698808508,0,0,0,0,0,0,0,0,1.24053903909388,1.84154367945675,0.841980283299221,0,1.02341449813341,0,0,0.925258162815933,0.532685175939381,0.492762936082855,1.03850885836724,0.581051892299796,0,0,0,0.918515585316854,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0.255897791311334,2.1396949401696,0,0,0,0,0,0,0,0.421258456238981,1.95053495635836,0,0,0,0,2.26016233240486,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687944129886466,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,1.19807400299395,1.28767814440971,1.78537165953498,1.61240333968143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640724475406168,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0,0,0,0.251567901752575,0,0.228840068396924,1.05861646634267,0.310874401165561,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0.308801447160972,2.19284049578707,0.530067437837643,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0.853533837553127,0,0,0,0,0,0,0.431299245586727,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.78493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0.490296643507811,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@ENST00000528549,p3@uc001tvs.1 | |short_description=p3@ENST00000528549,p3@uc001tvs.1 | ||
}} | }} |
Latest revision as of 05:18, 24 July 2015
Short description: | p3@ENST00000528549, p3@uc001tvs.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000528549_5end, CAGE_peak_3_at_uc001tvs.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 215bp_to_ENST00000528549, uc001tvs.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 7.39e-17 | 23 |
adipocyte of breast | 6.62e-14 | 2 |
fibroblast | 8.50e-14 | 76 |
preadipocyte of the breast | 1.11e-09 | 3 |
preadipocyte | 1.18e-08 | 12 |
smooth muscle cell of the pulmonary artery | 3.10e-08 | 1 |
smooth muscle cell of the esophagus | 4.07e-08 | 1 |
stromal cell of pancreas | 1.26e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.04e-14 | 27 |
breast | 1.35e-10 | 10 |
chest | 1.21e-09 | 11 |
skin of body | 5.85e-09 | 41 |
integument | 7.31e-08 | 46 |
integumental system | 7.31e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.24e-21 | 5 |
myotonic disease | 4.24e-21 | 5 |
muscle tissue disease | 4.24e-21 | 5 |
myopathy | 4.24e-21 | 5 |
muscular disease | 4.24e-21 | 5 |
myotonic dystrophy | 4.24e-21 | 5 |
heart disease | 8.60e-14 | 2 |
vascular disease | 1.11e-07 | 1 |
ischemia | 1.11e-07 | 1 |
extrinsic cardiomyopathy | 1.11e-07 | 1 |
myocardial ischemia | 1.11e-07 | 1 |
myocardial infarction | 1.11e-07 | 1 |
cardiovascular system disease | 2.50e-07 | 4 |