FFCP PHASE1:Hg19::chr12:120972848..120972851,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:120972848..120972851,- | |||
|coexpression_cluster_id=C210 | |||
|description=CAGE_peak_at_chr12:120972848..120972851,- | |description=CAGE_peak_at_chr12:120972848..120972851,- | ||
|id=chr12:120972848..120972851,- | |id=chr12:120972848..120972851,- | ||
|ontology_enrichment_celltype=CL:0000838!7.65e-20!52;CL:0000542!2.72e-19!53;CL:0000051!2.72e-19!53;CL:0002031!3.34e-10!124;CL:0000988!6.23e-10!182;CL:0000738!9.36e-10!140;CL:0000945!1.11e-09!24;CL:0000826!1.11e-09!24;CL:0000037!1.80e-09!172;CL:0000566!1.80e-09!172;CL:0002032!1.48e-08!165;CL:0000837!1.48e-08!165;CL:0002087!1.69e-08!119;CL:0000084!1.78e-08!25;CL:0000827!1.78e-08!25;CL:0000624!2.02e-07!6 | |ontology_enrichment_celltype=CL:0000838!7.65e-20!52;CL:0000542!2.72e-19!53;CL:0000051!2.72e-19!53;CL:0002031!3.34e-10!124;CL:0000988!6.23e-10!182;CL:0000738!9.36e-10!140;CL:0000945!1.11e-09!24;CL:0000826!1.11e-09!24;CL:0000037!1.80e-09!172;CL:0000566!1.80e-09!172;CL:0002032!1.48e-08!165;CL:0000837!1.48e-08!165;CL:0002087!1.69e-08!119;CL:0000084!1.78e-08!25;CL:0000827!1.78e-08!25;CL:0000624!2.02e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0001014;6.75e-26;2!CL:0001016;6.75e-26;2!CL:0000945;1.53e-18;24!CL:0000542;8.90e-17;53!CL:0002032;1.25e-13;1!CL:0000557;1.25e-13;1!CL:0000895;1.25e-13;1!CL:0000453;5.85e-11;5!CL:0000236;2.72e-09;13!CL:0000840;2.78e-09;5!CL:0000624;3.86e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,9.87e-26,2;CL:0001016,9.87e-26,2;CL:0000945,1.53e-18,24;CL:0000826,1.53e-18,24;CL:0000838,2.05e-18,52;CL:0000542,4.76e-18,53;CL:0000051,4.76e-18,53;CL:0000810,9.73e-14,1;CL:0000895,9.73e-14,1;CL:0002436,9.73e-14,1;CL:0002427,9.73e-14,1;CL:0002428,9.73e-14,1;CL:0002429,9.73e-14,1;CL:0002433,9.73e-14,1;CL:0002431,9.73e-14,1;CL:0002432,9.73e-14,1;CL:0002031,4.24e-11,120;CL:0000453,6.80e-11,5;CL:0000738,1.23e-09,136;CL:0002032,1.49e-09,161;CL:0000837,1.49e-09,161;CL:0000624,3.02e-09,6;CL:0000840,3.14e-09,5;CL:0001029,3.14e-09,5;CL:0000037,4.32e-09,168;CL:0000236,1.15e-08,14;CL:0000988,1.50e-08,177;CL:0002087,1.10e-07,115;CL:0000893,1.64e-07,2;CL:0002489,1.64e-07,2;CL:0000809,1.64e-07,2;CL:0000808,1.64e-07,2;CL:0000894,1.64e-07,2;CL:0000806,1.64e-07,2;CL:0000807,1.64e-07,2;CL:0000805,1.64e-07,2;CL:0002425,1.64e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;8.90e-17;53!CL:0002427;1.25e-13;1!CL:0002425;1.87e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!8.50e-08!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;4.53e-14;1!UBERON:0005208;4.53e-14;1!UBERON:0004145;4.53e-14;1!UBERON:0005946;4.53e-14;1!UBERON:0005965;4.53e-14;1!UBERON:0002078;4.53e-14;1!UBERON:0000029;6.64e-14;1!UBERON:0002081;1.12e-07;2!UBERON:0002133;1.12e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,3.98e-14,1;UBERON:0005208,3.98e-14,1;UBERON:0005946,3.98e-14,1;UBERON:0005965,3.98e-14,1;UBERON:0002078,3.98e-14,1;UBERON:0000029,6.65e-14,1;UBERON:0002081,1.05e-07,2;UBERON:0002133,1.05e-07,2;UBERON:0010227,1.05e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0.464448369948228,0,0,0,3.79589282843478,13.0795693888428,0.587200878669695,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,1.28019066769952,0,0,0.661044872784862,0,3.41527781465669,0,3.44045905312706,0,0,0.263384084775077,0.196709770113833,0.393010762749165,1.85041349099558,0,0,0.473447805734733,0,0,0.589211814949674,0.664601683750863,0.541607727530031,0,0.260118695119756,0.164437904603676,0.276350017785848,0,0,0,0,0,1.53288197440768,0.68725489096526,0,0,0,0,0,0,0,0,0,0.604820229674197,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0.364295288292542,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.898401253958239,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0.142283686696828,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,1.10776324914963,0.311039587661807,0,0,0,0.394573622547734,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0.91227394607833,0.19566461893209,0,0,0,0,0.126373159256976,0.300646838828985,0,0,0,0,0,0,0,0,0.195984794828755,0.435296032902013,0,0,0.0967563312890851,0.219267951258557,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0.171594997861965,0,0,0.471388069233591,0,0,0,0,0,0,1.27746588066972,0,0.525774708558629,0.279282401272254,0,3.58936512288407,0,0,0.223171457441873,0,0,0,0,0,0,0,0.338693328263138,0,0,0.321506296930038,0.137539436597234,0,1.1248694577575,3.0952078182318,0,0,1.65491985328316,0.83927341015997,0,0,0.383830394638891,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0,2.48083010905975,0.395223263795889,0.60896299190448,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0.19998739585493,0,0.172214979660816,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0.690359926060101,0,0,0.20170506870352,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.345701962667338,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.392600934460972,0,0,0.205325613712494,0,0,0.467878926924211,0,0,0,0,0.301925687133347,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0.0802413666891683,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0.336760265072938,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0.464448369948228,0,0,0,3.79589282843478,13.0795693888428,0.587200878669695,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,1.28019066769952,0,0,0.661044872784862,0,3.41527781465669,0,3.44045905312706,0,0,0.263384084775077,0.196709770113833,0.393010762749165,1.85041349099558,0,0,0.473447805734733,0,0,0.589211814949674,0.664601683750863,0.541607727530031,0,0.260118695119756,0.164437904603676,0.276350017785848,0,0,0,0,0,1.53288197440768,0.68725489096526,0,0,0,0,0,0,0,0,0,0.604820229674197,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0.364295288292542,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.898401253958239,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0.142283686696828,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,1.10776324914963,0.311039587661807,0,0,0,0.394573622547734,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0.91227394607833,0.19566461893209,0,0,0,0,0.126373159256976,0.300646838828985,0,0,0,0,0,0,0,0,0.195984794828755,0.435296032902013,0,0,0.0967563312890851,0.219267951258557,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0.171594997861965,0,0,0.471388069233591,0,0,0,0,0,0,1.27746588066972,0,0.525774708558629,0.279282401272254,0,3.58936512288407,0,0,0.223171457441873,0,0,0,0,0,0,0,0.338693328263138,0,0,0.321506296930038,0.137539436597234,0,1.1248694577575,3.0952078182318,0,0,1.65491985328316,0.83927341015997,0,0,0.383830394638891,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0,2.48083010905975,0.395223263795889,0.60896299190448,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0.19998739585493,0,0.172214979660816,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0.690359926060101,0,0,0.20170506870352,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.345701962667338,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.392600934460972,0,0,0.205325613712494,0,0,0.467878926924211,0,0,0,0,0.301925687133347,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0.0802413666891683,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0.336760265072938,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:120972848..120972851,- | |short_description=p@chr12:120972848..120972851,- | ||
}} | }} |
Latest revision as of 05:47, 24 July 2015
Short description: | p@chr12:120972848..120972851, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:120972848..120972851, - |
Coexpression cluster: | C210_Burkitt_lymphoma_appendix_acute_diffuse_CD19_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 3.98e-14 | 1 |
right atrium valve | 3.98e-14 | 1 |
outflow tract of atrium | 3.98e-14 | 1 |
outflow part of right atrium | 3.98e-14 | 1 |
right cardiac atrium | 3.98e-14 | 1 |
lymph node | 6.65e-14 | 1 |
cardiac atrium | 1.05e-07 | 2 |
atrioventricular valve | 1.05e-07 | 2 |
future cardiac atrium | 1.05e-07 | 2 |