FFCP PHASE1:Hg19::chr12:131118370..131118390,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=15bp_to_ENST00000541840_5end | |||
|cluster_id=chr12:131118370..131118390,- | |||
|coexpression_cluster_id=C3255 | |||
|description=CAGE_peak_5_at_ENST00000541840_5end | |||
|id=chr12:131118370..131118390,- | |||
|ontology_enrichment_celltype=CL:0000242!7.92e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;6.41e-31;2!CL:0000242;6.41e-31;2!CL:0000312;5.27e-13;5!CL:0000240;5.36e-11;6!CL:0000311;5.36e-11;6!CL:0000079;5.36e-11;6!CL:0000237;5.36e-11;6!CL:0000047;7.49e-09;2!CL:0002535;7.49e-09;2!CL:0000362;1.25e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.04e-31,2;CL:0000312,4.39e-13,5;CL:0000240,4.60e-11,6;CL:0000311,4.60e-11,6;CL:0000079,4.60e-11,6;CL:0000237,4.60e-11,6;CL:0000036,4.60e-11,6;CL:0000357,4.60e-11,6;CL:0000114,4.60e-11,6;CL:0002535,8.09e-09,2;CL:0000362,1.13e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;5.36e-11;6!CL:0000114;5.36e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;7.00e-17;1!DOID:1357;7.00e-17;1!DOID:4362;3.76e-13;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.47e-17,1;DOID:1357,6.47e-17,1;DOID:4362,4.13e-13,5 | |||
|ontology_enrichment_uberon=UBERON:0001017!7.82e-28!82;UBERON:0000073!2.92e-27!94;UBERON:0001016!2.92e-27!94;UBERON:0005743!3.10e-26!86;UBERON:0001049!6.91e-24!57;UBERON:0005068!6.91e-24!57;UBERON:0006241!6.91e-24!57;UBERON:0007135!6.91e-24!57;UBERON:0002616!1.33e-20!59;UBERON:0000955!2.84e-20!69;UBERON:0006238!2.84e-20!69;UBERON:0003075!3.57e-17!86;UBERON:0007284!3.57e-17!86;UBERON:0002346!3.69e-16!90;UBERON:0002298!1.01e-15!8;UBERON:0002780!3.22e-15!41;UBERON:0001890!3.22e-15!41;UBERON:0006240!3.22e-15!41;UBERON:0003080!8.77e-15!42;UBERON:0004121!2.28e-14!169;UBERON:0000924!7.32e-14!173;UBERON:0006601!7.32e-14!173;UBERON:0007023!1.14e-12!115;UBERON:0002020!1.36e-11!34;UBERON:0003528!1.36e-11!34;UBERON:0001896!1.53e-11!3;UBERON:0005290!1.53e-11!3;UBERON:0010096!1.53e-11!3;UBERON:0001893!2.04e-11!34;UBERON:0000988!2.27e-11!3;UBERON:0003076!6.86e-11!15;UBERON:0003057!6.86e-11!15;UBERON:0001869!2.82e-10!32;UBERON:0004733!2.93e-10!12;UBERON:0002028!2.93e-10!12;UBERON:0007277!2.93e-10!12;UBERON:0000033!3.00e-10!123;UBERON:0002791!7.09e-10!33;UBERON:0000153!1.59e-09!129;UBERON:0007811!1.59e-09!129;UBERON:0003296!1.61e-09!4;UBERON:0010133!1.61e-09!4;UBERON:0004732!2.03e-09!13;UBERON:0003056!3.23e-09!61;UBERON:0000007!4.65e-09!2;UBERON:0002148!3.87e-08!2;UBERON:0009662!3.87e-08!2;UBERON:0002360!1.29e-07!2;UBERON:0000094!1.29e-07!2;UBERON:0007645!1.29e-07!2;UBERON:0000956!3.70e-07!25;UBERON:0000203!3.70e-07!25;UBERON:0001950!4.39e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;3.55e-35;4!UBERON:0010133;3.55e-35;4!UBERON:0000007;4.24e-32;2!UBERON:0001894;1.97e-20;7!UBERON:0001764;7.00e-17;1!UBERON:0001825;7.00e-17;1!UBERON:0000002;4.05e-11;6!UBERON:0001560;4.05e-11;6!UBERON:0001905;7.49e-09;2!UBERON:0002757;7.49e-09;2!UBERON:0010134;7.49e-09;2!UBERON:0006955;7.49e-09;2!UBERON:0005408;7.49e-09;2!UBERON:0004801;7.49e-09;2!UBERON:0001899;7.49e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,4.75e-35,4;UBERON:0010133,4.75e-35,4;UBERON:0000007,4.59e-32,2;UBERON:0001894,2.32e-20,7;UBERON:0006222,2.32e-20,7;UBERON:0001764,6.47e-17,1;UBERON:0001825,6.47e-17,1;UBERON:0000002,4.37e-11,6;UBERON:0001560,4.37e-11,6;UBERON:0006955,8.09e-09,2;UBERON:0004801,8.09e-09,2;UBERON:0001905,8.74e-09,2;UBERON:0002757,8.74e-09,2;UBERON:0010134,8.74e-09,2;UBERON:0005408,8.74e-09,2;UBERON:0001899,8.74e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25966373927138,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23073497220554,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.303747783290123,0,0.315222829196793,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86867698375726,0,0,0,0.573409195690071,0.221858103073705,0.745156835296601,0,0,0,0,0,1.40500471742064,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862598491173454,0,5.35127227140868,0,0,0,0,0,0,0.80057074828547,0,0,0.192687675289379,0,0,0,0.504143392443436,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,1.00885116665647,4.85572483389305,6.14687916648504,0,0.230467975111559,0,0.339848664884159,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04121302500737,0.795803100645473,0,2.823652050974,0,0.150962843566674,0,0,3.29222107453066,0,0.471353094203252,0.588925401344836,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0.872701380680755,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@ENST00000541840 | |||
}} |
Latest revision as of 06:45, 24 July 2015
Short description: | p5@ENST00000541840 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ENST00000541840_5end |
Coexpression cluster: | C3255_pituitary_smallcell_maxillary_neuroblastoma_argyrophil_gastrointestinal_small |
Association with transcript: | 15bp_to_ENST00000541840_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.04e-31 | 2 |
keratinocyte | 4.39e-13 | 5 |
stratified squamous epithelial cell | 4.60e-11 | 6 |
keratin accumulating cell | 4.60e-11 | 6 |
stratified epithelial cell | 4.60e-11 | 6 |
keratinizing barrier epithelial cell | 4.60e-11 | 6 |
epithelial fate stem cell | 4.60e-11 | 6 |
stratified epithelial stem cell | 4.60e-11 | 6 |
surface ectodermal cell | 4.60e-11 | 6 |
epithelial cell of cervix | 8.09e-09 | 2 |
epidermal cell | 1.13e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 4.75e-35 | 4 |
neuroendocrine gland | 4.75e-35 | 4 |
pituitary gland | 4.59e-32 | 2 |
diencephalon | 2.32e-20 | 7 |
future diencephalon | 2.32e-20 | 7 |
maxillary sinus | 6.47e-17 | 1 |
paranasal sinus | 6.47e-17 | 1 |
uterine cervix | 4.37e-11 | 6 |
neck of organ | 4.37e-11 | 6 |
uterine epithelium | 8.09e-09 | 2 |
cervix epithelium | 8.09e-09 | 2 |
pineal body | 8.74e-09 | 2 |
regional part of epithalamus | 8.74e-09 | 2 |
secretory circumventricular organ | 8.74e-09 | 2 |
circumventricular organ | 8.74e-09 | 2 |
epithalamus | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.47e-17 | 1 |
maxillary sinus cancer | 6.47e-17 | 1 |
cervical cancer | 4.13e-13 | 5 |