FFCP PHASE1:Hg19::chr12:132904105..132904135,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:132904105..132904135,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_at_chr12:132904105..132904135,+ | |description=CAGE_peak_at_chr12:132904105..132904135,+ | ||
|id=chr12:132904105..132904135,+ | |id=chr12:132904105..132904135,+ | ||
|ontology_enrichment_celltype=CL:0002097;7.05e-34;2!CL:0000174;4.09e-23;3!CL:0000150;1.21e-08;9!CL:0000163;1.21e-08;9 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002097;7.05e-34;2!CL:0000174;4.09e-23;3!CL:0000150;1.21e-08;9!CL:0000163;1.21e-08;9 | ||
|ontology_enrichment_disease=DOID:170;2.74e-12;6 | |ontology_enrichment_celltype_v019_2=CL:0002097,7.05e-34,2;CL:0000174,4.09e-23,3;CL:0000150,1.21e-08,9;CL:0000163,1.21e-08,9 | ||
|ontology_enrichment_uberon=UBERON:0002037;9.76e-45;6!UBERON:0002680;2.66e-30;9!UBERON:0001895;2.66e-30;9!UBERON:0002369;4.09e-23;3!UBERON:0001235;4.09e-23;3!UBERON:0006858;4.09e-23;3!UBERON:0004733;4.59e-23;12!UBERON:0002028;4.59e-23;12!UBERON:0004732;2.16e-21;13 | |ontology_enrichment_development_v019=UBERON:0006215;6.24e-88;3 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:170;2.74e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:170,2.74e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002619!7.43e-38!22;UBERON:0001950!5.38e-36!20;UBERON:0001049!7.13e-35!57;UBERON:0005068!7.13e-35!57;UBERON:0006241!7.13e-35!57;UBERON:0007135!7.13e-35!57;UBERON:0001869!1.42e-33!32;UBERON:0002616!1.55e-33!59;UBERON:0000955!3.98e-33!69;UBERON:0006238!3.98e-33!69;UBERON:0000956!4.00e-33!25;UBERON:0000203!4.00e-33!25;UBERON:0001893!1.92e-31!34;UBERON:0001017!8.93e-30!82;UBERON:0002780!4.30e-29!41;UBERON:0001890!4.30e-29!41;UBERON:0006240!4.30e-29!41;UBERON:0002791!2.41e-28!33;UBERON:0003080!2.53e-28!42;UBERON:0005743!3.71e-28!86;UBERON:0002020!1.95e-27!34;UBERON:0003528!1.95e-27!34;UBERON:0000073!2.73e-27!94;UBERON:0001016!2.73e-27!94;UBERON:0003075!2.70e-26!86;UBERON:0007284!2.70e-26!86;UBERON:0007023!3.25e-26!115;UBERON:0002346!6.84e-25!90;UBERON:0000200!2.66e-20!6;UBERON:0003056!1.97e-18!61;UBERON:0000033!4.03e-18!123;UBERON:0000153!4.99e-17!129;UBERON:0007811!4.99e-17!129;UBERON:0001872!1.32e-15!5;UBERON:0002771!1.50e-15!3;UBERON:0004121!2.04e-15!169;UBERON:0000924!6.36e-15!173;UBERON:0006601!6.36e-15!173;UBERON:0001871!4.01e-10!7;UBERON:0004733!7.97e-10!12;UBERON:0002028!7.97e-10!12;UBERON:0007277!7.97e-10!12;UBERON:0002021!2.50e-09!5;UBERON:0000349!3.71e-09!5;UBERON:0004732!4.78e-09!13;UBERON:0000025!1.37e-08!194;UBERON:0000064!7.99e-08!219;UBERON:0003076!8.44e-08!15;UBERON:0003057!8.44e-08!15;UBERON:0000483!3.61e-07!309;UBERON:0000119!4.86e-07!312;UBERON:0001896!5.06e-07!3;UBERON:0005290!5.06e-07!3;UBERON:0010096!5.06e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.76e-45;6!UBERON:0002680;2.66e-30;9!UBERON:0001895;2.66e-30;9!UBERON:0002369;4.09e-23;3!UBERON:0001235;4.09e-23;3!UBERON:0006858;4.09e-23;3!UBERON:0004733;4.59e-23;12!UBERON:0002028;4.59e-23;12!UBERON:0004732;2.16e-21;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.76e-45,6;UBERON:0006215,9.76e-45,6;UBERON:0002680,2.66e-30,9;UBERON:0001895,2.66e-30,9;UBERON:0010092,2.66e-30,9;UBERON:0002369,4.09e-23,3;UBERON:0001235,4.09e-23,3;UBERON:0006858,4.09e-23,3;UBERON:0004733,4.59e-23,12;UBERON:0002028,4.59e-23,12;UBERON:0007277,4.59e-23,12;UBERON:0004732,2.16e-21,13;UBERON:0003076,1.04e-18,15;UBERON:0003057,1.04e-18,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87027409759286,2.06883333267483,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0.0821154570532092,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.3755727921195,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.478901577171454,0.205116364240755,0,0.207471757392654,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0.781078098613847,0.620060389503552,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87027409759286,2.06883333267483,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0.0821154570532092,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.3755727921195,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.478901577171454,0.205116364240755,0,0.207471757392654,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0.781078098613847,0.620060389503552,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:132904105..132904135,+ | |short_description=p@chr12:132904105..132904135,+ | ||
}} | }} |
Latest revision as of 06:52, 24 July 2015
Short description: | p@chr12:132904105..132904135, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:132904105..132904135, + |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 7.05e-34 | 2 |
steroid hormone secreting cell | 4.09e-23 | 3 |
glandular epithelial cell | 1.21e-08 | 9 |
endocrine cell | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.76e-45 | 6 |
rhombic lip | 9.76e-45 | 6 |
regional part of metencephalon | 2.66e-30 | 9 |
metencephalon | 2.66e-30 | 9 |
future metencephalon | 2.66e-30 | 9 |
adrenal gland | 4.09e-23 | 3 |
adrenal cortex | 4.09e-23 | 3 |
adrenal/interrenal gland | 4.09e-23 | 3 |
segmental subdivision of hindbrain | 4.59e-23 | 12 |
hindbrain | 4.59e-23 | 12 |
presumptive hindbrain | 4.59e-23 | 12 |
segmental subdivision of nervous system | 2.16e-21 | 13 |
posterior neural tube | 1.04e-18 | 15 |
chordal neural plate | 1.04e-18 | 15 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 2.74e-12 | 6 |