FFCP PHASE1:Hg19::chr12:2296602..2296621,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:2296602..2296621,+ | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_at_chr12:2296602..2296621,+ | |||
|id=chr12:2296602..2296621,+ | |||
|ontology_enrichment_celltype=CL:0000819!8.62e-12!1;CL:0002274!5.72e-09!5;CL:0000457!5.72e-09!5;CL:0002191!5.72e-09!5;CL:0000097!5.72e-09!5;CL:0000831!5.72e-09!5;CL:0002028!5.72e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000785;8.10e-41;1!CL:0000819;8.10e-41;1!CL:0000945;1.02e-15;24!CL:0000097;3.22e-09;5!CL:0000542;3.33e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,6.62e-41,1;CL:0000785,3.11e-21,2;CL:0000955,3.11e-21,2;CL:0000818,3.11e-21,2;CL:0000954,3.11e-21,2;CL:0000816,3.11e-21,2;CL:0000945,1.02e-15,24;CL:0000826,1.02e-15,24;CL:0000817,1.22e-14,3;CL:0000097,3.22e-09,5;CL:0002028,3.22e-09,5;CL:0000838,1.10e-07,52;CL:0000542,1.48e-07,53;CL:0000051,1.48e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000954;3.44e-21;2!CL:0000051;3.33e-07;53 | |||
|ontology_enrichment_disease=DOID:0060073!8.62e-12!1;DOID:8675!8.62e-12!1;DOID:0060058!6.48e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;8.10e-41;1!DOID:8675;8.10e-41;1!DOID:0060058;2.40e-36;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,6.62e-41,1;DOID:8675,6.62e-41,1;DOID:0060058,2.40e-36,10;DOID:2531,8.01e-08,51;DOID:0060083,8.01e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0003978!3.17e-14!3;UBERON:0009751!3.17e-14!3;UBERON:0000946!3.17e-14!3;UBERON:0002523!3.17e-14!3;UBERON:0005983!3.17e-14!3;UBERON:0002165!3.17e-14!3;UBERON:0002062!3.17e-14!3;UBERON:0007280!3.17e-14!3;UBERON:0000989!2.18e-11!1;UBERON:0008811!2.18e-11!1;UBERON:0006258!2.18e-11!1;UBERON:0005876!2.18e-11!1;UBERON:0004874!2.18e-11!1;UBERON:0002135!2.42e-11!1;UBERON:0001154!2.68e-11!1;UBERON:0001153!2.68e-11!1;UBERON:0002146!2.96e-11!1;UBERON:0005623!2.96e-11!1;UBERON:0002372!3.63e-11!1;UBERON:0001961!3.63e-11!1;UBERON:0001744!3.63e-11!1;UBERON:0001735!3.63e-11!1;UBERON:0006834!4.44e-11!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.6834000725377,14.0747540162547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31475892859011,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0.59873811429845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5963831372533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790446527591777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr12:2296602..2296621,+ | |||
}} |
Latest revision as of 07:36, 24 July 2015
Short description: | p@chr12:2296602..2296621, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:2296602..2296621, + |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 6.62e-41 | 1 |
mature B cell | 3.11e-21 | 2 |
pre-B-II cell | 3.11e-21 | 2 |
transitional stage B cell | 3.11e-21 | 2 |
small pre-B-II cell | 3.11e-21 | 2 |
immature B cell | 3.11e-21 | 2 |
lymphocyte of B lineage | 1.02e-15 | 24 |
pro-B cell | 1.02e-15 | 24 |
precursor B cell | 1.22e-14 | 3 |
mast cell | 3.22e-09 | 5 |
basophil mast progenitor cell | 3.22e-09 | 5 |
lymphoid lineage restricted progenitor cell | 1.10e-07 | 52 |
lymphocyte | 1.48e-07 | 53 |
common lymphoid progenitor | 1.48e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 6.62e-41 | 1 |
lymphosarcoma | 6.62e-41 | 1 |
lymphoma | 2.40e-36 | 10 |
hematologic cancer | 8.01e-08 | 51 |
immune system cancer | 8.01e-08 | 51 |