FFCP PHASE1:Hg19::chr12:26112311..26112315,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:26112311..26112315,- to FFCP PHASE1:Hg19::chr12:26112311..26112315,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000502069_5end | |||
|cluster_id=chr12:26112311..26112315,- | |||
|description=CAGE_peak_1_at_ENST00000502069_5end | |||
|id=chr12:26112311..26112315,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.22e-14;1!CL:0002625;1.22e-14;1!CL:0000228;1.22e-14;1!CL:0000216;1.22e-14;1!CL:0002372;1.22e-14;1!CL:0002591;1.22e-14;1!CL:0002548;8.10e-10;6!CL:0000039;1.53e-08;7!CL:0000586;1.53e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,7.13e-15,1;CL:0002625,7.13e-15,1;CL:0000216,7.13e-15,1;CL:0000228,1.41e-14,1;CL:0002372,1.41e-14,1;CL:0002591,2.11e-14,1;CL:0002548,1.01e-09,6;CL:0000039,1.85e-08,7;CL:0000586,1.85e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;1.22e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,5.42e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.96e-12!115;UBERON:0001049!8.32e-11!57;UBERON:0005068!8.32e-11!57;UBERON:0006241!8.32e-11!57;UBERON:0007135!8.32e-11!57;UBERON:0000477!1.47e-10!286;UBERON:0000033!2.09e-10!123;UBERON:0000153!3.58e-10!129;UBERON:0007811!3.58e-10!129;UBERON:0001893!5.02e-10!34;UBERON:0000073!1.15e-09!94;UBERON:0001016!1.15e-09!94;UBERON:0002020!1.46e-09!34;UBERON:0003528!1.46e-09!34;UBERON:0002780!1.57e-09!41;UBERON:0001890!1.57e-09!41;UBERON:0006240!1.57e-09!41;UBERON:0005743!1.58e-09!86;UBERON:0002791!1.80e-09!33;UBERON:0003075!2.58e-09!86;UBERON:0007284!2.58e-09!86;UBERON:0002616!2.59e-09!59;UBERON:0000955!4.43e-09!69;UBERON:0006238!4.43e-09!69;UBERON:0003080!4.52e-09!42;UBERON:0002346!7.21e-09!90;UBERON:0001869!8.98e-09!32;UBERON:0001017!1.39e-08!82;UBERON:0003135!1.78e-08!11;UBERON:0000468!9.38e-08!659;UBERON:0003056!1.32e-07!61;UBERON:0004121!1.57e-07!169;UBERON:0000924!2.50e-07!173;UBERON:0006601!2.50e-07!173;UBERON:0000480!2.77e-07!626;UBERON:0000473!3.41e-07!8;UBERON:0000467!4.23e-07!625;UBERON:0004111!7.60e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.48e-15;8!UBERON:0001136;1.22e-14;1!UBERON:0001343;1.22e-14;1!UBERON:0004910;1.22e-14;1!UBERON:0004813;1.22e-14;1!UBERON:0003135;1.76e-11;11!UBERON:0001954;5.74e-08;2!UBERON:0000078;5.74e-08;2!UBERON:0003022;5.74e-08;2!UBERON:0004909;5.74e-08;2!UBERON:0002012;5.74e-08;2!UBERON:0002421;5.74e-08;2!UBERON:0002600;5.74e-08;2!UBERON:0008886;5.74e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.56e-15,8;UBERON:0001136,7.13e-15,1;UBERON:0001343,7.13e-15,1;UBERON:0004910,7.13e-15,1;UBERON:0005154,7.13e-15,1;UBERON:0005295,7.13e-15,1;UBERON:0004813,7.13e-15,1;UBERON:0005297,7.13e-15,1;UBERON:0005294,7.13e-15,1;UBERON:0010141,7.13e-15,1;UBERON:0005891,7.13e-15,1;UBERON:0003135,1.82e-11,11;UBERON:0004909,4.38e-08,2;UBERON:0001954,4.69e-08,2;UBERON:0003022,4.69e-08,2;UBERON:0002421,4.69e-08,2;UBERON:0002600,4.69e-08,2;UBERON:0000078,7.52e-08,2;UBERON:0007497,7.52e-08,2;UBERON:0003643,7.52e-08,2;UBERON:0003504,7.52e-08,2;UBERON:0003469,7.52e-08,2;UBERON:0003496,7.52e-08,2;UBERON:0002012,7.52e-08,2;UBERON:0008886,7.52e-08,2;UBERON:0007303,7.52e-08,2;UBERON:0002061,7.52e-08,2;UBERON:0005432,7.52e-08,2;UBERON:0004363,7.52e-08,2;UBERON:0000945,1.40e-07,8;UBERON:0010039,1.40e-07,8 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,1.20538905604795,0.730310090387373,0,0.123121058076788,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0.189069634328136,0.443458794925128,0.087834785693126,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.825354125820202,0,0,0,0.33472061276467,0,0,0,0,0,0.267899184852239,0,0.225222960966644,0,0,0.366403487860815,0,0,0,1.98788780678127,0.25326102332916,0.794455084879313,0.286836620748814,0,0,1.06748995729705,0,1.55605517699883,0.269421344139376,0.490385709340376,0,0,0,0,0,0,0.352303495931295,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0.625592599359821,0.554128230968366,0,0,0,0.453728732640084,0.538168907066586,0.213557388818567,0,0.600182192168805,0.309157587715317,0.257640540045629,0.558350568994769,0.675105328965065,0.194874010322397,0.252433774244115,0.184099797284599,0,0,0,0.508681776931463,0.386521706326594,0,0.286804595389004,0.487894824518382,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.354920400119532,0.337169380156203,0.723033089650446,0.110293972732394,0,0.237270619111097,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.577465791044295,0,0.380508304469197,0,0.858486162094873,0,0,0.297262324577456,0,0,0.141775097242386,0.268675568108545,0,0,0,0,0,0.144119953416961,0,0.253991577168676,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0,0.384417447767103,0,0,0,0.308419387605311,0,0.328508624055237,0,0.116210378459959,0.120859449591622,0.200506470303285,0.0920809889358963,0,0,0,0,0.231046011313244,0,0,0.316654886678627,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0,0.309123034943167,0,0.165018999841176,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.638063562472921,0.10115778085555,0,0,0,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0,0.632758849437452,0,0,0,0,0.78494864019923,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0,0,0,0.405820753925408,0,0,0,0.0982490410131212,0,0,0.422215270595328,0,0,0,0.192444225451024,0,0,0.564862804660675,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0.307240764308458,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.562677665642051,0.667852230137435,0.16480387422676,0,0.19924798825107,0,0,0.409074730008619,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.221158519862449,0.295547618953547,0,0.21787692703798,0.41827123283581,0.307801034015188,0,0,0,0.325942115766024,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0.468528891450678,0,0,0.242780379534093,0.394584402849391,1.20990716048664,0,0.31593289814244,0.150323419414493,0.103688191397247,0,0.330991955875499,0.627865836814451,0,0.569219092059585,0,0,0,0,0.17472666824203,0.171986032471617,0,0.146178634172371,0.492692742319255,0.0969890164884194,0,0,0.137041924646751,0,0.569797163602908,0.195551382734803,0,0.213452994739353,1.9980960958213,0,0,0.171594997861965,0,0.124252535565433,0.471388069233591,0,0,0,0.288950589901519,0.600420288709789,0,0,0,0,0,0.458320848023367,0,0,0.429226048136571,0,0.470284307407084,0,0,0,0,0,0,0,1.59045937961861,0.681017030557878,0,0.275078873194468,0,0.449947783103001,0,0.364497339948148,0,0.945668487590378,0.681909645754975,0.105600336519406,0.179287339332845,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.258565912723101,0.26446520348538,0,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0,0.554645257684261,0.372578417648301,0.138348634936231,0.124980407962107,0.303298235083296,0,0.235265819698172,0,0,0,0.934853239388898,0.554805861502613,0.568209015825267,0.251567901752575,0,0.457680136793847,0.151230923763239,0.15543720058278,0.73927574994817,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0.363697318405119,0.107410557042488,0,0,0,0.343395705182793,0.673498977531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| 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| ||
|short_description=p1@ENST00000502069 | |||
}} | }} |
Latest revision as of 07:47, 24 July 2015
Short description: | p1@ENST00000502069 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000502069_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000502069_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 7.13e-15 | 1 |
seminiferous tubule epithelial cell | 7.13e-15 | 1 |
Sertoli cell | 7.13e-15 | 1 |
multinucleate cell | 1.41e-14 | 1 |
myotube | 1.41e-14 | 1 |
smooth muscle cell of the pulmonary artery | 2.11e-14 | 1 |
cardiac fibroblast | 1.01e-09 | 6 |
germ line cell | 1.85e-08 | 7 |
germ cell | 1.85e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.56e-15 | 8 |
mesothelium | 7.13e-15 | 1 |
seminiferous tubule of testis | 7.13e-15 | 1 |
epithelium of male gonad | 7.13e-15 | 1 |
epithelial cord | 7.13e-15 | 1 |
sex cord | 7.13e-15 | 1 |
seminiferous tubule epithelium | 7.13e-15 | 1 |
testis sex cord | 7.13e-15 | 1 |
genital ridge | 7.13e-15 | 1 |
primitive sex cord of indifferent gonad | 7.13e-15 | 1 |
coelomic epithelium | 7.13e-15 | 1 |
male reproductive organ | 1.82e-11 | 11 |
epithelium of gonad | 4.38e-08 | 2 |
Ammon's horn | 4.69e-08 | 2 |
lobe parts of cerebral cortex | 4.69e-08 | 2 |
hippocampal formation | 4.69e-08 | 2 |
limbic lobe | 4.69e-08 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 7.52e-08 | 2 |
developing epithelial placode | 7.52e-08 | 2 |
respiratory system arterial blood vessel | 7.52e-08 | 2 |
respiratory system blood vessel | 7.52e-08 | 2 |
respiratory system artery | 7.52e-08 | 2 |
head blood vessel | 7.52e-08 | 2 |
pulmonary artery | 7.52e-08 | 2 |
pulmonary vascular system | 7.52e-08 | 2 |
pharyngeal vasculature | 7.52e-08 | 2 |
truncus arteriosus | 7.52e-08 | 2 |
aortic sac | 7.52e-08 | 2 |
pharyngeal arch artery | 7.52e-08 | 2 |
stomach | 1.40e-07 | 8 |
food storage organ | 1.40e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 5.42e-15 | 1 |