FFCP PHASE1:Hg19::chr12:28116320..28116345,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:28116320..28116345,- | |||
|coexpression_cluster_id=C812 | |||
|description=CAGE_peak_at_chr12:28116320..28116345,- | |description=CAGE_peak_at_chr12:28116320..28116345,- | ||
|id=chr12:28116320..28116345,- | |id=chr12:28116320..28116345,- | ||
|ontology_enrichment_celltype=CL:0002076!3.25e-16!43;CL:0000223!3.34e-13!59;CL:0002159!1.47e-11!13;CL:0002368!4.15e-11!13;CL:0000066!5.58e-11!254;CL:0000244!5.12e-09!4;CL:0000731!5.12e-09!4;CL:0002251!3.15e-07!21;CL:0002166!3.44e-07!3;CL:0002621!4.52e-07!3;CL:0002328!6.78e-07!3;CL:0002077!9.23e-07!33 | |ontology_enrichment_celltype=CL:0002076!3.25e-16!43;CL:0000223!3.34e-13!59;CL:0002159!1.47e-11!13;CL:0002368!4.15e-11!13;CL:0000066!5.58e-11!254;CL:0000244!5.12e-09!4;CL:0000731!5.12e-09!4;CL:0002251!3.15e-07!21;CL:0002166!3.44e-07!3;CL:0002621!4.52e-07!3;CL:0002328!6.78e-07!3;CL:0002077!9.23e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0000244;1.20e-32;4!CL:0000731;1.20e-32;4!CL:0002159;1.63e-27;14!CL:0002166;6.07e-25;3!CL:0002076;1.33e-17;42!CL:0000317;2.07e-17;2!CL:1000448;2.07e-17;2!CL:0002308;2.07e-17;2!CL:0002140;2.07e-17;2!CL:0002368;4.49e-15;13!CL:0000362;1.34e-14;9!CL:0000240;1.95e-12;6!CL:0000311;1.95e-12;6!CL:0000079;1.95e-12;6!CL:0000237;1.95e-12;6!CL:0002621;5.56e-12;3!CL:0002328;1.22e-11;3!CL:0002077;1.01e-09;34!CL:0002252;1.56e-09;1!CL:0002336;4.15e-09;1!CL:0002261;4.15e-09;1!CL:0002170;4.15e-09;1!CL:0000622;1.71e-07;5!CL:0000312;2.68e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.31e-32,4;CL:0000731,1.31e-32,4;CL:0002159,1.47e-27,14;CL:0002166,5.37e-25,3;CL:0002076,1.69e-17,42;CL:0000317,2.25e-17,2;CL:1000448,2.25e-17,2;CL:0002308,2.25e-17,2;CL:0002140,2.25e-17,2;CL:0002368,3.75e-15,13;CL:0000362,1.29e-14,9;CL:0000240,1.95e-12,6;CL:0000311,1.95e-12,6;CL:0000079,1.95e-12,6;CL:0000237,1.95e-12,6;CL:0000036,1.95e-12,6;CL:0000357,1.95e-12,6;CL:0000114,1.95e-12,6;CL:0000223,3.10e-12,58;CL:0002621,6.38e-12,3;CL:0000066,9.62e-12,253;CL:0002328,1.22e-11,3;CL:0002077,6.57e-11,34;CL:0002252,1.56e-09,1;CL:0002336,4.87e-09,1;CL:0002261,4.87e-09,1;CL:0002170,4.87e-09,1;CL:0000622,1.77e-07,5;CL:0000312,2.51e-07,5;CL:0002321,4.42e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000357;1.95e-12;6!CL:0000114;1.95e-12;6!UBERON:0000358;2.35e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!3.76e-10!5;UBERON:0004119!1.21e-08!169;UBERON:0000925!1.21e-08!169;UBERON:0006595!1.21e-08!169;UBERON:0005910!2.36e-08!6;UBERON:0001004!1.59e-07!72;UBERON:0001949!4.52e-07!3;UBERON:0000161!6.41e-07!35;UBERON:0004815!6.78e-07!3;UBERON:0002031!6.78e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.48e-26;5!UBERON:0000486;5.34e-24;12!UBERON:0005910;7.17e-22;6!UBERON:0001708;7.18e-19;4!UBERON:0008895;7.18e-19;4!UBERON:0002419;2.07e-17;2!UBERON:0007771;2.07e-17;2!UBERON:0003297;2.07e-17;2!UBERON:0001821;2.07e-17;2!UBERON:0003487;2.07e-17;2!UBERON:0001820;2.07e-17;2!UBERON:0011159;3.24e-15;5!UBERON:0001949;5.56e-12;3!UBERON:0004815;1.22e-11;3!UBERON:0002031;1.22e-11;3!UBERON:0005911;2.71e-10;36!UBERON:0001003;7.94e-09;15!UBERON:0007376;7.94e-09;15!UBERON:0010371;9.20e-09;31!UBERON:0002185;2.51e-07;5!UBERON:0011137;3.46e-07;11!UBERON:0010323;3.46e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.71e-26,5;UBERON:0005910,7.57e-22,6;UBERON:0001708,6.56e-19,4;UBERON:0008895,6.56e-19,4;UBERON:0002419,2.25e-17,2;UBERON:0007771,2.25e-17,2;UBERON:0003297,2.25e-17,2;UBERON:0001821,2.25e-17,2;UBERON:0003487,2.25e-17,2;UBERON:0001820,2.25e-17,2;UBERON:0005089,2.25e-17,2;UBERON:0005088,2.25e-17,2;UBERON:0011159,3.01e-15,5;UBERON:0010188,8.46e-13,6;UBERON:0002539,8.46e-13,6;UBERON:0008816,8.46e-13,6;UBERON:0001949,6.38e-12,3;UBERON:0004815,1.22e-11,3;UBERON:0002031,1.22e-11,3;UBERON:0001003,7.78e-09,15;UBERON:0007376,7.78e-09,15;UBERON:0007383,7.78e-09,15;UBERON:0003102,4.79e-08,99;UBERON:0002185,2.51e-07,5;UBERON:0004119,2.86e-07,160;UBERON:0000925,2.86e-07,160;UBERON:0006595,2.86e-07,160;UBERON:0010323,3.36e-07,11 | |||
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| ||
|short_description=p@chr12:28116320..28116345,- | |short_description=p@chr12:28116320..28116345,- | ||
}} | }} |
Latest revision as of 07:55, 24 July 2015
Short description: | p@chr12:28116320..28116345, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:28116320..28116345, - |
Coexpression cluster: | C812_Prostate_Urothelial_Mallassezderived_Sebocyte_Keratinocyte_Gingival_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 3.71e-26 | 5 |
transitional epithelium | 7.57e-22 | 6 |
jaw skeleton | 6.56e-19 | 4 |
splanchnocranium | 6.56e-19 | 4 |
skin gland | 2.25e-17 | 2 |
epidermis gland | 2.25e-17 | 2 |
gland of integumental system | 2.25e-17 | 2 |
sebaceous gland | 2.25e-17 | 2 |
skin sebaceous gland | 2.25e-17 | 2 |
sweat gland | 2.25e-17 | 2 |
sweat gland placode | 2.25e-17 | 2 |
sebaceous gland placode | 2.25e-17 | 2 |
primary subdivision of cranial skeletal system | 3.01e-15 | 5 |
protuberance | 8.46e-13 | 6 |
pharyngeal arch | 8.46e-13 | 6 |
embryonic head | 8.46e-13 | 6 |
gingival epithelium | 6.38e-12 | 3 |
lower respiratory tract epithelium | 1.22e-11 | 3 |
epithelium of bronchus | 1.22e-11 | 3 |
skin epidermis | 7.78e-09 | 15 |
outer epithelium | 7.78e-09 | 15 |
enveloping layer of ectoderm | 7.78e-09 | 15 |
surface structure | 4.79e-08 | 99 |
bronchus | 2.51e-07 | 5 |
endoderm-derived structure | 2.86e-07 | 160 |
endoderm | 2.86e-07 | 160 |
presumptive endoderm | 2.86e-07 | 160 |
cranial skeletal system | 3.36e-07 | 11 |