FFCP PHASE1:Hg19::chr12:54823108..54823119,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:54823108..54823119,+ | |||
|coexpression_cluster_id=C48 | |coexpression_cluster_id=C48 | ||
|description=CAGE_peak_at_chr12:54823108..54823119,+ | |description=CAGE_peak_at_chr12:54823108..54823119,+ | ||
|id=chr12:54823108..54823119,+ | |id=chr12:54823108..54823119,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.05e-29;1!UBERON:0009847;8.17e-11;3!UBERON:0003353;8.17e-11;3!UBERON:0006603;6.57e-09;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!1.38e-20!11;UBERON:0006947!8.25e-20!3;UBERON:0004054!8.25e-20!3;UBERON:0001155!1.12e-17!9;UBERON:0005904!5.31e-15!4;UBERON:0007023!1.85e-12!115;UBERON:0000160!2.20e-10!27;UBERON:0001046!1.78e-08!19;UBERON:0001000!5.22e-08!1;UBERON:0005352!5.22e-08!1;UBERON:0005409!6.99e-08!35;UBERON:0001154!7.26e-08!1;UBERON:0001153!7.26e-08!1;UBERON:0000996!8.28e-08!1;UBERON:0000998!1.07e-07!1;UBERON:0006868!1.07e-07!1;UBERON:0001301!1.58e-07!1;UBERON:0007190!2.47e-07!1;UBERON:0002363!3.17e-07!1;UBERON:0007647!3.17e-07!1;UBERON:0010115!3.17e-07!1;UBERON:0004921!8.45e-07!129;UBERON:0004185!8.45e-07!129 | |ontology_enrichment_uberon=UBERON:0000059!1.38e-20!11;UBERON:0006947!8.25e-20!3;UBERON:0004054!8.25e-20!3;UBERON:0001155!1.12e-17!9;UBERON:0005904!5.31e-15!4;UBERON:0007023!1.85e-12!115;UBERON:0000160!2.20e-10!27;UBERON:0001046!1.78e-08!19;UBERON:0001000!5.22e-08!1;UBERON:0005352!5.22e-08!1;UBERON:0005409!6.99e-08!35;UBERON:0001154!7.26e-08!1;UBERON:0001153!7.26e-08!1;UBERON:0000996!8.28e-08!1;UBERON:0000998!1.07e-07!1;UBERON:0006868!1.07e-07!1;UBERON:0001301!1.58e-07!1;UBERON:0007190!2.47e-07!1;UBERON:0002363!3.17e-07!1;UBERON:0007647!3.17e-07!1;UBERON:0010115!3.17e-07!1;UBERON:0004921!8.45e-07!129;UBERON:0004185!8.45e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001000;2.05e-29;1!UBERON:0005352;2.05e-29;1!UBERON:0001255;1.33e-15;2!UBERON:0001556;1.33e-15;2!UBERON:0000059;3.48e-11;11!UBERON:0006947;9.43e-11;3!UBERON:0004054;9.43e-11;3!UBERON:0005904;2.18e-08;4!UBERON:0001052;2.52e-08;4!UBERON:0000160;3.34e-07;17!UBERON:0004907;6.58e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,1.78e-29,1;UBERON:0005352,1.78e-29,1;UBERON:0001255,1.33e-15,2;UBERON:0001556,1.33e-15,2;UBERON:0001046,3.79e-14,19;UBERON:0000059,3.48e-11,11;UBERON:0006947,8.99e-11,3;UBERON:0004054,8.99e-11,3;UBERON:0000162,3.88e-09,14;UBERON:0001353,3.88e-09,14;UBERON:0000163,3.88e-09,14;UBERON:0006866,3.88e-09,14;UBERON:0000164,3.88e-09,14;UBERON:0000931,3.88e-09,14;UBERON:0004122,1.37e-08,15;UBERON:0005904,2.11e-08,4;UBERON:0001052,2.43e-08,4;UBERON:0000160,3.34e-07,17;UBERON:0004907,6.39e-07,5 | |||
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|short_description=p@chr12:54823108..54823119,+ | |short_description=p@chr12:54823108..54823119,+ | ||
}} | }} |
Latest revision as of 10:05, 24 July 2015
Short description: | p@chr12:54823108..54823119, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:54823108..54823119, + |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vas deferens | 1.78e-29 | 1 |
spermatic cord | 1.78e-29 | 1 |
urinary bladder | 1.33e-15 | 2 |
lower urinary tract | 1.33e-15 | 2 |
hindgut | 3.79e-14 | 19 |
large intestine | 3.48e-11 | 11 |
male genital duct | 8.99e-11 | 3 |
internal male genitalia | 8.99e-11 | 3 |
cloaca | 3.88e-09 | 14 |
anal region | 3.88e-09 | 14 |
embryonic cloaca | 3.88e-09 | 14 |
terminal part of digestive tract | 3.88e-09 | 14 |
primitive urogenital sinus | 3.88e-09 | 14 |
proctodeum | 3.88e-09 | 14 |
genitourinary system | 1.37e-08 | 15 |
duct of male reproductive system | 2.11e-08 | 4 |
rectum | 2.43e-08 | 4 |
intestine | 3.34e-07 | 17 |
lower digestive tract | 6.39e-07 | 5 |