FFCP PHASE1:Hg19::chr12:94602372..94602385,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr12:94602372..94602385,+ to FFCP PHASE1:Hg19::chr12:94602372..94602385,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:94602372..94602385,+ | |||
|description=CAGE_peak_at_chr12:94602372..94602385,+ | |||
|id=chr12:94602372..94602385,+ | |||
|ontology_enrichment_celltype=CL:0000988!7.85e-40!182;CL:0000037!1.00e-37!172;CL:0000566!1.00e-37!172;CL:0000738!2.94e-37!140;CL:0002087!1.05e-29!119;CL:0002032!1.35e-29!165;CL:0000837!1.35e-29!165;CL:0002031!7.91e-22!124;CL:0000542!3.20e-20!53;CL:0000051!3.20e-20!53;CL:0000838!9.39e-19!52;CL:0000080!2.14e-16!6;CL:0002057!6.64e-12!42;CL:0000763!1.46e-11!112;CL:0000049!1.46e-11!112;CL:0000766!2.89e-11!76;CL:0000134!3.53e-11!358;CL:0000860!7.24e-11!45;CL:0002320!1.03e-10!365;CL:0000784!4.71e-10!3;CL:0000945!5.37e-10!24;CL:0000826!5.37e-10!24;CL:0000817!1.14e-09!3;CL:0000767!2.40e-09!3;CL:0000842!2.92e-09!3;CL:0000094!3.64e-09!8;CL:0000081!4.20e-09!11;CL:0000219!4.32e-09!390;CL:0002194!9.61e-08!63;CL:0000576!9.61e-08!63;CL:0000040!9.61e-08!63;CL:0000559!9.61e-08!63;CL:0000048!1.05e-07!430;CL:0000084!1.05e-07!25;CL:0000827!1.05e-07!25;CL:0000034!1.18e-07!444;CL:0000785!1.71e-07!2;CL:0000955!1.71e-07!2;CL:0000818!1.71e-07!2;CL:0000954!1.71e-07!2;CL:0000816!1.71e-07!2;CL:0000723!2.00e-07!436;CL:0002009!2.13e-07!65;CL:0000224!4.93e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000784;9.96e-22;3!CL:0000946;5.98e-17;1!CL:0000786;5.98e-17;1!CL:0000785;1.78e-16;1!CL:0000037;1.78e-16;1!CL:0001024;1.78e-16;1!CL:0000819;1.78e-16;1!CL:0000771;6.67e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000785,8.57e-32,2;CL:0000955,8.57e-32,2;CL:0000818,8.57e-32,2;CL:0000954,8.57e-32,2;CL:0000816,8.57e-32,2;CL:0000784,1.05e-21,3;CL:0000817,1.43e-21,3;CL:0000946,5.53e-17,1;CL:0000786,5.53e-17,1;CL:0000980,5.53e-17,1;CL:0001024,1.04e-16,1;CL:0000819,1.21e-16,1;CL:0000738,1.74e-12,136;CL:0000037,5.94e-12,168;CL:0000988,2.73e-11,177;CL:0002087,7.41e-10,115;CL:0000771,6.42e-09,2;CL:0002031,1.92e-07,120;CL:0002032,8.11e-07,161;CL:0000837,8.11e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000954;1.37e-31;2 | |||
|ontology_enrichment_disease=DOID:0060058!6.47e-18!10;DOID:2531!1.00e-13!51;DOID:0060083!1.00e-13!51 | |||
|ontology_enrichment_disease_v019=DOID:0060060;8.18e-17;1!DOID:0060061;8.18e-17;1!DOID:8691;8.18e-17;1!DOID:0060073;1.78e-16;1!DOID:8675;1.78e-16;1!DOID:0060058;4.66e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,7.57e-17,1;DOID:0060061,7.57e-17,1;DOID:8691,7.57e-17,1;DOID:0060073,1.21e-16,1;DOID:8675,1.21e-16,1;DOID:0060058,4.26e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.66e-13!112;UBERON:0002390!4.36e-13!102;UBERON:0003061!4.36e-13!102;UBERON:0002384!4.39e-10!375;UBERON:0002371!3.32e-07!80;UBERON:0002405!3.61e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.0787107813136792,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0,0.568676929949686,1.46800219667424,0,1.20326668482085,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0.28769239232215,0,0,0,0.645484683583826,0,0,0,0,0.612167784741805,0.320929027076094,0,0,0,0,0.870627715885752,1.13477044938228,0,0,0,0,0,1.10483290796269,0.316462387440884,0,0.425208599930087,0.628975936525128,0.336985893439485,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8618874916641,4.0039643754609,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.591092280605782,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0.642352300414798,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.988823245360557,0,0,0,0,0,0.615424027305347,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569261198172555,0,0,0,0,0,0,0,0,0.296521128680622,0.494255755786011,0.104421949505455,0,0,0,1.45963831372533,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41753560563109,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,2.99981093782395,0.106691729694141,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.68748760178494,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:94602372..94602385,+ | |||
}} | }} |
Latest revision as of 13:45, 24 July 2015
Short description: | p@chr12:94602372..94602385, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:94602372..94602385, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature B cell | 8.57e-32 | 2 |
pre-B-II cell | 8.57e-32 | 2 |
transitional stage B cell | 8.57e-32 | 2 |
small pre-B-II cell | 8.57e-32 | 2 |
immature B cell | 8.57e-32 | 2 |
plasmacytoid dendritic cell | 1.05e-21 | 3 |
precursor B cell | 1.43e-21 | 3 |
antibody secreting cell | 5.53e-17 | 1 |
plasma cell | 5.53e-17 | 1 |
plasmablast | 5.53e-17 | 1 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.04e-16 | 1 |
B-1 B cell | 1.21e-16 | 1 |
leukocyte | 1.74e-12 | 136 |
hematopoietic stem cell | 5.94e-12 | 168 |
hematopoietic cell | 2.73e-11 | 177 |
nongranular leukocyte | 7.41e-10 | 115 |
eosinophil | 6.42e-09 | 2 |
hematopoietic lineage restricted progenitor cell | 1.92e-07 | 120 |
hematopoietic oligopotent progenitor cell | 8.11e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.11e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 7.57e-17 | 1 |
cutaneous T cell lymphoma | 7.57e-17 | 1 |
mycosis fungoides | 7.57e-17 | 1 |
lymphatic system cancer | 1.21e-16 | 1 |
lymphosarcoma | 1.21e-16 | 1 |
lymphoma | 4.26e-07 | 10 |