FFCP PHASE1:Hg19::chr13:110861222..110861235,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:110861222..110861235,- | |||
|coexpression_cluster_id=C566 | |coexpression_cluster_id=C566 | ||
|description=CAGE_peak_at_chr13:110861222..110861235,- | |description=CAGE_peak_at_chr13:110861222..110861235,- | ||
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|ontology_enrichment_celltype=CL:0000222!2.69e-08!119;CL:0000055!1.47e-07!180 | |ontology_enrichment_celltype=CL:0000222!2.69e-08!119;CL:0000055!1.47e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002138;2.49e-12;6!CL:0000136;9.79e-10;13!CL:0000115;3.07e-09;36!CL:0002548;1.91e-08;6!CL:1000746;1.30e-07;7!CL:1000612;1.30e-07;7!CL:1000449;1.61e-07;15!CL:0002615;2.22e-07;3!CL:0002188;3.87e-07;5 | |ontology_enrichment_celltype_v019=CL:0002138;2.49e-12;6!CL:0000136;9.79e-10;13!CL:0000115;3.07e-09;36!CL:0002548;1.91e-08;6!CL:1000746;1.30e-07;7!CL:1000612;1.30e-07;7!CL:1000449;1.61e-07;15!CL:0002615;2.22e-07;3!CL:0002188;3.87e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.95e-12,6;CL:0002138,1.95e-12,6;CL:0005022,1.95e-12,6;CL:0000115,1.70e-09,36;CL:0002548,1.05e-08,6;CL:0000136,4.01e-08,15;CL:0002078,5.46e-08,45;CL:1000449,1.91e-07,15;CL:1000746,2.29e-07,7;CL:1000612,2.29e-07,7;CL:0002615,3.46e-07,3;CL:0002188,7.85e-07,5 | |||
|ontology_enrichment_development_v019=CL:0005022;2.49e-12;6 | |ontology_enrichment_development_v019=CL:0005022;2.49e-12;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!8.22e-12!79;UBERON:0007798!8.22e-12!79;UBERON:0001009!1.72e-11!113;UBERON:0004535!1.87e-10!110;UBERON:0003914!2.72e-10!118;UBERON:0000055!3.96e-10!69;UBERON:0004872!7.08e-10!84;UBERON:0000468!4.80e-08!659;UBERON:0005256!1.05e-07!143;UBERON:0001981!1.66e-07!60;UBERON:0007500!1.66e-07!60;UBERON:0004537!1.66e-07!60;UBERON:0006965!1.66e-07!60;UBERON:0007100!2.27e-07!27;UBERON:0003103!4.55e-07!69;UBERON:0000477!7.15e-07!286 | |ontology_enrichment_uberon=UBERON:0002049!8.22e-12!79;UBERON:0007798!8.22e-12!79;UBERON:0001009!1.72e-11!113;UBERON:0004535!1.87e-10!110;UBERON:0003914!2.72e-10!118;UBERON:0000055!3.96e-10!69;UBERON:0004872!7.08e-10!84;UBERON:0000468!4.80e-08!659;UBERON:0005256!1.05e-07!143;UBERON:0001981!1.66e-07!60;UBERON:0007500!1.66e-07!60;UBERON:0004537!1.66e-07!60;UBERON:0006965!1.66e-07!60;UBERON:0007100!2.27e-07!27;UBERON:0003103!4.55e-07!69;UBERON:0000477!7.15e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;4.94e-09;8!UBERON:0004536;4.94e-09;8!UBERON:0006558;4.94e-09;8!UBERON:0000353;8.47e-08;15!UBERON:0000074;1.30e-07;7!UBERON:0001229;1.30e-07;7!UBERON:0006555;1.61e-07;15!UBERON:0004819;1.61e-07;15!UBERON:0001285;1.61e-07;15!UBERON:0007684;1.61e-07;15!UBERON:0002465;4.67e-07;10!UBERON:0003513;5.75e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0001473;4.94e-09;8!UBERON:0004536;4.94e-09;8!UBERON:0006558;4.94e-09;8!UBERON:0000353;8.47e-08;15!UBERON:0000074;1.30e-07;7!UBERON:0001229;1.30e-07;7!UBERON:0006555;1.61e-07;15!UBERON:0004819;1.61e-07;15!UBERON:0001285;1.61e-07;15!UBERON:0007684;1.61e-07;15!UBERON:0002465;4.67e-07;10!UBERON:0003513;5.75e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.16e-10,117;UBERON:0000055,3.62e-09,68;UBERON:0001473,4.14e-09,8;UBERON:0004536,4.14e-09,8;UBERON:0006558,4.14e-09,8;UBERON:0002049,4.34e-09,78;UBERON:0007798,4.34e-09,78;UBERON:0001009,1.27e-08,112;UBERON:0004535,2.59e-08,109;UBERON:0000353,1.43e-07,15;UBERON:0002417,1.90e-07,60;UBERON:0000916,1.90e-07,60;UBERON:0004211,1.91e-07,15;UBERON:0009773,1.91e-07,15;UBERON:0001231,1.91e-07,15;UBERON:0001285,1.91e-07,15;UBERON:0007684,1.91e-07,15;UBERON:0004208,1.91e-07,15;UBERON:0003103,2.14e-07,68;UBERON:0010532,2.29e-07,7;UBERON:0000074,2.29e-07,7;UBERON:0001229,2.29e-07,7;UBERON:0001230,2.29e-07,7;UBERON:0003220,2.29e-07,7;UBERON:0005749,2.29e-07,7;UBERON:0004199,2.29e-07,7;UBERON:0004209,2.29e-07,7;UBERON:0004198,2.29e-07,7;UBERON:0004872,3.36e-07,83;UBERON:0002465,4.08e-07,10;UBERON:0006555,6.88e-07,16;UBERON:0004819,6.88e-07,16;UBERON:0003513,7.51e-07,7;UBERON:0009569,8.30e-07,112 | |||
|phase1_expression=1.45342703416445,4.49611100171065,2.25527046553554,2.00146596706261,2.23480547213644,3.48935409640147,2.53299878168311,0.631719873426831,2.08948502559871,0.245733936501509,0,0,0.527533956456907,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0,0.816002764977012,0.313454721478088,0.286235987131057,0.410623275218653,1.63205431473244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0,0.665188192387692,0.527008714158756,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,0,0,0.825354125820202,1.04497483268405,1.03366703667732,1.42306505074684,1.67360306382335,0.805658634218294,0,3.66093086322254,0,5.67099363517232,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0.549605231791222,0,0,0,2.48485975847659,0.759783069987479,0,0,0.709336764396714,1.68203280042692,2.1349799145941,3.45334567784024,0.933633106199299,1.61652806483626,1.47115712802113,0.605429710579726,4.03323147135999,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,3.21447008062124,0,0.718618141816238,0,0.125118519871964,0,0,0.30648779579902,1.35214253015937,1.13432183160021,0.358779271377724,0.213557388818567,0.423863802319124,0,0.206105058476878,0,0,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0,0.508681776931463,0,0,0,0,0.132529768321485,0.464775771478074,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,4.42893272774789,1.40241773803446,0,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,3.75352764178792,2.77791307545966,4.94660795809955,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0.766765358330422,0,0,0,0,0,0,0,0,1.71072446022705,0.411309970813294,0,0,0,0.87192013766656,0.2933531432838,0.775630294546667,0,2.535908257668,1.59562869950922,1.04007436911366,0,0,0.266422179016099,1.28680194292333,0.542621605391443,0,0,1.42156779497018,0,0,0,0.899756920638513,0,0,0,1.4377491329495,2.29723871668228,0,0.579125226670317,1.43833425785268,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.623912584592421,2.67643483195743,0.788512075169673,0.234282829985426,0,0,1.03473071292505,0,0.368738337083406,0.0868836144680828,0.979005787313703,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0.460385919864187,1.40330047216537,0.512556597022804,0,2.57366273829772,2.96836132889982,0.154209693802656,0.355123450626254,0,0,0,0,0.601519410909855,0,0.229628896329213,0.546273504020151,0.655622074797121,0,1.15523005656622,0,1.46139224653261,1.89992932007176,1.13733384070897,1.02056223165909,3.45465465763423,7.71136263451447,0.541892875087706,2.50844886927427,0,0,0.895499018888713,0,0,0.256450125116389,0.984043937099117,0,0.824328093181778,0,0,0,0.650060246036521,1.6068392984416,0.096670718292122,0.154048617114644,0.15350367472613,0.551346289938122,0.107420244868274,0.435050081742686,0.340906509664404,0.0890320356467374,0.330569830721956,0.384380134730212,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0.18532421910392,1.5743737541619,0.744316738719335,0.632758849437452,1.14378116354295,0,0,0,1.56989728039846,0.539617372749944,1.09814811894422,0.706874414074119,0.202182481573316,0,0.421258456238981,0,1.46228093778771,1.05650146756755,0.272999822815972,0.282810863907425,1.13008116620243,0,0,1.31535265576129,0,0,1.01455188481352,0.92947049429925,0.563391205064483,0,0.294747123039363,0.7133421029625,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,1.39473591775749,0,0,0,0,1.24415835064723,0,0,0,0.295930216910801,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0.10893846351899,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,2.23300811812344,0.915975934018623,6.39641731222362,0,0,0,0,0,0,0,0,0.632994193584081,0.489698424477443,0,0,0.995261931078505,0.176915129006678,1.83309043480088,0,0.123563938946503,0.313265848516366,0,2.40773294189637,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0.330991955875499,0,0,0.853828638089378,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,1.80784592624426,0.274083849293502,0,0,0,0,0.426905989478705,0,0.288180834308212,0,0,0,0,0.235694034616795,0.135904206073614,0.104602846312333,0,0,0,0,0,2.14882720709979,0,1.11712960508902,1.14580212005842,1.43574604915363,0.798716001995964,1.28767814440971,0.446342914883745,0.403100834920358,7.20599767084807,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0.83088067605837,0,0,0,0,0.236417121897595,0.367182116944987,0,0,0.191915197319445,0.714695326373367,0,0,0,0.864221491201268,0.653174720218818,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0.992332043623902,0,0,0,0,0,0,0.3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| ||
|short_description=p@chr13:110861222..110861235,- | |short_description=p@chr13:110861222..110861235,- | ||
}} | }} |
Latest revision as of 14:30, 24 July 2015
Short description: | p@chr13:110861222..110861235, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:110861222..110861235, - |
Coexpression cluster: | C566_Pericytes_Renal_hepatic_Fibroblast_Endothelial_Hepatic_Lens |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.95e-12 | 6 |
endothelial cell of lymphatic vessel | 1.95e-12 | 6 |
vascular lymphangioblast | 1.95e-12 | 6 |
endothelial cell | 1.70e-09 | 36 |
cardiac fibroblast | 1.05e-08 | 6 |
fat cell | 4.01e-08 | 15 |
meso-epithelial cell | 5.46e-08 | 45 |
epithelial cell of nephron | 1.91e-07 | 15 |
glomerular cell | 2.29e-07 | 7 |
kidney corpuscule cell | 2.29e-07 | 7 |
adipocyte of omentum tissue | 3.46e-07 | 3 |
glomerular endothelial cell | 7.85e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 3.16e-10 | 117 |
vessel | 3.62e-09 | 68 |
lymphatic vessel | 4.14e-09 | 8 |
lymph vasculature | 4.14e-09 | 8 |
lymphatic part of lymphoid system | 4.14e-09 | 8 |
vasculature | 4.34e-09 | 78 |
vascular system | 4.34e-09 | 78 |
circulatory system | 1.27e-08 | 112 |
cardiovascular system | 2.59e-08 | 109 |
parenchyma | 1.43e-07 | 15 |
abdominal segment of trunk | 1.90e-07 | 60 |
abdomen | 1.90e-07 | 60 |
nephron epithelium | 1.91e-07 | 15 |
renal tubule | 1.91e-07 | 15 |
nephron tubule | 1.91e-07 | 15 |
nephron | 1.91e-07 | 15 |
uriniferous tubule | 1.91e-07 | 15 |
nephrogenic mesenchyme | 1.91e-07 | 15 |
compound organ | 2.14e-07 | 68 |
primitive nephron | 2.29e-07 | 7 |
renal glomerulus | 2.29e-07 | 7 |
renal corpuscle | 2.29e-07 | 7 |
glomerular capsule | 2.29e-07 | 7 |
metanephric mesenchyme | 2.29e-07 | 7 |
glomerular tuft | 2.29e-07 | 7 |
S-shaped body | 2.29e-07 | 7 |
renal vesicle | 2.29e-07 | 7 |
comma-shaped body | 2.29e-07 | 7 |
splanchnic layer of lateral plate mesoderm | 3.36e-07 | 83 |
lymphoid system | 4.08e-07 | 10 |
excretory tube | 6.88e-07 | 16 |
kidney epithelium | 6.88e-07 | 16 |
trunk blood vessel | 7.51e-07 | 7 |
subdivision of trunk | 8.30e-07 | 112 |