FFCP PHASE1:Hg19::chr13:114610895..114610936,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:114610895..114610936,+ | |||
|description=CAGE_peak_at_chr13:114610895..114610936,+ | |description=CAGE_peak_at_chr13:114610895..114610936,+ | ||
|id=chr13:114610895..114610936,+ | |id=chr13:114610895..114610936,+ | ||
|ontology_enrichment_celltype=CL:0000057!5.48e-16!75;CL:0000055!3.77e-15!180;CL:0002620!1.06e-10!23;CL:0000144!4.48e-08!625;CL:0000548!4.49e-08!679;CL:0000004!4.49e-08!679;CL:0000255!4.49e-08!679;CL:0000012!6.68e-08!682;CL:0002334!9.85e-07!12 | |ontology_enrichment_celltype=CL:0000057!5.48e-16!75;CL:0000055!3.77e-15!180;CL:0002620!1.06e-10!23;CL:0000144!4.48e-08!625;CL:0000548!4.49e-08!679;CL:0000004!4.49e-08!679;CL:0000255!4.49e-08!679;CL:0000012!6.68e-08!682;CL:0002334!9.85e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002577;2.92e-19;3!CL:0002620;6.36e-09;23!CL:0002599;2.82e-07;1!CL:0002616;2.82e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.90e-19,3;CL:0002620,8.29e-09,23;CL:0000057,1.66e-07,76;CL:0002616,1.72e-07,1;CL:0002599,2.21e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;2.75e-11;5!DOID:450;2.75e-11;5!DOID:66;2.75e-11;5!DOID:423;2.75e-11;5!DOID:0080000;2.75e-11;5!DOID:11722;2.75e-11;5!DOID:4556;1.60e-09;3!DOID:5662;1.25e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.86e-11,5;DOID:450,2.86e-11,5;DOID:66,2.86e-11,5;DOID:423,2.86e-11,5;DOID:0080000,2.86e-11,5;DOID:11722,2.86e-11,5;DOID:4556,1.67e-09,3;DOID:5662,1.42e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.35e-11!95;UBERON:0005631!4.69e-10!14;UBERON:0000158!4.69e-10!14;UBERON:0002097!8.00e-10!40;UBERON:0002199!4.05e-09!45;UBERON:0002416!4.05e-09!45;UBERON:0000305!7.84e-08!7;UBERON:0000475!3.92e-07!365;UBERON:0001828!4.67e-07!8;UBERON:0000478!5.23e-07!24;UBERON:0004871!9.67e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.38e-14;4!UBERON:0004913;2.82e-07;1!UBERON:0003703;2.82e-07;1!UBERON:0001174;2.82e-07;1!UBERON:0004914;2.82e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,9.99e-15,4;UBERON:0004340,9.99e-15,4;UBERON:0003124,1.27e-08,7;UBERON:0005631,2.99e-07,14;UBERON:0000158,2.99e-07,14;UBERON:0004913,3.20e-07,1;UBERON:0003703,3.20e-07,1;UBERON:0001174,3.20e-07,1;UBERON:0004914,3.20e-07,1 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,1.74467704820074,0,0,0,0.245733936501509,0,0.436882744260345,1.31883489114227,0,0,2.6893005858071,0.602694528023977,2.92124036154949,0.975865597581014,0,0.204000691244253,0,0.286235987131057,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.662045904066094,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368502951935304,0,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0.612975591598039,0.150238058906597,0,1.4351170855109,0,0.211931901159562,1.20036438433761,1.03052529238439,0.257640540045629,0,0.506328996723799,0.194874010322397,1.00973509697646,1.01254888506529,0,0.355009592516614,0.10075209822764,0.508681776931463,0.386521706326594,1.09098448236334,0.860413786167011,0,0,0,0,0,0,0,0,5.52539685409922,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0.602878754119172,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,3.63753085735511,1.66435439510497,2.11673205330776,0.248107807818777,1.53461973288062,0,0.128139149255701,1.02341449813341,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0,0,5.01266175758212,0,0.229628896329213,0.728364672026868,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0.275673144969061,0,0,0,0.0890320356467374,0,0.768760269460425,1.02090169995667,0,0,2.51849877464512,0,0,0,0,0,0,0,0.316379424718726,0,0.767693373934002,0,0,0,0.719489830333259,0,0.235624804691373,0,0,0,1.46290121726877,0,0,0.409499734223957,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.890894042497916,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0,0,0,0,0,0,1.50746117111426,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2736104321016,0,3.26255835443057,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0,0,0.265841714557995,1.04349012362347,0,0.761610424337591,0.813741466409323,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0,0,0.694567422971502,0.489473409012935,0.358177682162975,0,0.657852148736121,2.8270263351341,6.94490537775293,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,4.54012762853469,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18284868973636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05785611324902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709992004383392,0.852134047591577,0,0.4582137370881,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,2.01837352645104,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0.363356758541113,0.214100523890983,0,0,0,1.74467704820074,0,0,0,0.245733936501509,0,0.436882744260345,1.31883489114227,0,0,2.6893005858071,0.602694528023977,2.92124036154949,0.975865597581014,0,0.204000691244253,0,0.286235987131057,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.662045904066094,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368502951935304,0,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0.612975591598039,0.150238058906597,0,1.4351170855109,0,0.211931901159562,1.20036438433761,1.03052529238439,0.257640540045629,0,0.506328996723799,0.194874010322397,1.00973509697646,1.01254888506529,0,0.355009592516614,0.10075209822764,0.508681776931463,0.386521706326594,1.09098448236334,0.860413786167011,0,0,0,0,0,0,0,0,5.52539685409922,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0.602878754119172,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,3.63753085735511,1.66435439510497,2.11673205330776,0.248107807818777,1.53461973288062,0,0.128139149255701,1.02341449813341,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0,0,5.01266175758212,0,0.229628896329213,0.728364672026868,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0.275673144969061,0,0,0,0.0890320356467374,0,0.768760269460425,1.02090169995667,0,0,2.51849877464512,0,0,0,0,0,0,0,0.316379424718726,0,0.767693373934002,0,0,0,0.719489830333259,0,0.235624804691373,0,0,0,1.46290121726877,0,0,0.409499734223957,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.890894042497916,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0,0,0,0,0,0,1.50746117111426,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2736104321016,0,3.26255835443057,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0,0,0.265841714557995,1.04349012362347,0,0.761610424337591,0.813741466409323,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0,0,0.694567422971502,0.489473409012935,0.358177682162975,0,0.657852148736121,2.8270263351341,6.94490537775293,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,4.54012762853469,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18284868973636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05785611324902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709992004383392,0.852134047591577,0,0.4582137370881,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,2.01837352645104,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr13:114610895..114610936,+ | |short_description=p@chr13:114610895..114610936,+ | ||
}} | }} |
Latest revision as of 14:51, 24 July 2015
Short description: | p@chr13:114610895..114610936, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:114610895..114610936, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.90e-19 | 3 |
skin fibroblast | 8.29e-09 | 23 |
fibroblast | 1.66e-07 | 76 |
perirenal adipocyte cell | 1.72e-07 | 1 |
smooth muscle cell of the esophagus | 2.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
placenta | 9.99e-15 | 4 |
allantois | 9.99e-15 | 4 |
chorion | 1.27e-08 | 7 |
extraembryonic membrane | 2.99e-07 | 14 |
membranous layer | 2.99e-07 | 14 |
hepatopancreatic ampulla | 3.20e-07 | 1 |
extrahepatic bile duct | 3.20e-07 | 1 |
common bile duct | 3.20e-07 | 1 |
duodenal papilla | 3.20e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.86e-11 | 5 |
myotonic disease | 2.86e-11 | 5 |
muscle tissue disease | 2.86e-11 | 5 |
myopathy | 2.86e-11 | 5 |
muscular disease | 2.86e-11 | 5 |
myotonic dystrophy | 2.86e-11 | 5 |
lung large cell carcinoma | 1.67e-09 | 3 |
pleomorphic carcinoma | 1.42e-07 | 1 |