FFCP PHASE1:Hg19::chr13:28964179..28964195,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-109bp_to_AF339822_5end | |association_with_transcript=-109bp_to_AF339822_5end | ||
|cluster_id=chr13:28964179..28964195,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_2_at_AF339822_5end | |description=CAGE_peak_2_at_AF339822_5end | ||
|id=chr13:28964179..28964195,- | |id=chr13:28964179..28964195,- | ||
|ontology_enrichment_celltype=CL:0002541!4.34e-11!3;CL:0002057!4.47e-07!42 | |ontology_enrichment_celltype=CL:0002541!4.34e-11!3;CL:0002057!4.47e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.81e-34;3!CL:0000349;1.45e-12;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.81e-34,3;CL:0000349,1.45e-12,19 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.61e-26;1!UBERON:0003124;8.64e-26;1!UBERON:0010226;8.64e-26;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!4.34e-11!3;UBERON:0000920!4.34e-11!3;UBERON:0002771!5.66e-10!3;UBERON:0006331!1.74e-09!3;UBERON:0000988!4.09e-09!3;UBERON:0003124!4.40e-08!7;UBERON:0007023!4.67e-08!115;UBERON:0002148!9.61e-07!2;UBERON:0009662!9.61e-07!2 | |ontology_enrichment_uberon=UBERON:0000476!4.34e-11!3;UBERON:0000920!4.34e-11!3;UBERON:0002771!5.66e-10!3;UBERON:0006331!1.74e-09!3;UBERON:0000988!4.09e-09!3;UBERON:0003124!4.40e-08!7;UBERON:0007023!4.67e-08!115;UBERON:0002148!9.61e-07!2;UBERON:0009662!9.61e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.81e-34;3!UBERON:0000920;2.81e-34;3!UBERON:0000478;4.12e-26;24!UBERON:0002084;8.64e-26;1!UBERON:0002082;8.64e-26;1!UBERON:0005631;3.52e-23;10!UBERON:0000158;3.52e-23;10!UBERON:0004151;1.60e-09;3!UBERON:0001987;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.81e-34,3;UBERON:0003124,1.35e-32,7;UBERON:0005631,7.83e-29,14;UBERON:0000158,7.83e-29,14;UBERON:0000478,4.02e-26,24;UBERON:0002084,9.79e-26,1;UBERON:0002082,9.79e-26,1;UBERON:0010226,9.79e-26,1;UBERON:0004151,1.67e-09,3;UBERON:0001987,1.80e-07,4;UBERON:0004340,1.80e-07,4 | |||
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| ||
|short_description=p2@AF339822 | |short_description=p2@AF339822 | ||
}} | }} |
Latest revision as of 15:24, 24 July 2015
Short description: | p2@AF339822 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AF339822_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -109bp_to_AF339822_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.81e-34 | 3 |
extraembryonic cell | 1.45e-12 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.81e-34 | 3 |
chorion | 1.35e-32 | 7 |
extraembryonic membrane | 7.83e-29 | 14 |
membranous layer | 7.83e-29 | 14 |
extraembryonic structure | 4.02e-26 | 24 |
heart left ventricle | 9.79e-26 | 1 |
cardiac ventricle | 9.79e-26 | 1 |
future cardiac ventricle | 9.79e-26 | 1 |
cardiac chamber | 1.67e-09 | 3 |
placenta | 1.80e-07 | 4 |
allantois | 1.80e-07 | 4 |