FFCP PHASE1:Hg19::chr14:105233283..105233290,-: Difference between revisions
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|id=chr14:105233283..105233290,-
|short_description=p@chr14:105233283..105233290,-
|description=CAGE_peak_at_chr14:105233283..105233290,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:105233283..105233290,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_at_chr14:105233283..105233290,- | |||
|id=chr14:105233283..105233290,- | |||
|ontology_enrichment_celltype=CL:0002541!3.26e-11!3;CL:0000181!1.97e-10!12;CL:0000417!1.97e-10!12;CL:0000668!1.97e-10!12;CL:0000414!1.97e-10!12;CL:0000412!1.97e-10!12;CL:0000182!1.97e-10!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.82e-21;12!CL:0002541;3.50e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.82e-21,12;CL:0002541,3.39e-14,3;CL:0000223,7.21e-13,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.60e-23;11!UBERON:0009497;1.64e-19;13!UBERON:0001041;7.70e-12;30!CL:0000223;7.74e-10;58!UBERON:0003104;4.11e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;4.44e-11;1!DOID:10165;4.44e-11;1!DOID:1798;4.44e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,5.43e-11,1;DOID:10165,5.43e-11,1;DOID:1798,5.43e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0005057!1.62e-16!26;UBERON:0002107!9.61e-14!19;UBERON:0006925!9.61e-14!19;UBERON:0008836!9.61e-14!19;UBERON:0007499!1.91e-12!25;UBERON:0009856!6.99e-12!26;UBERON:0008835!1.29e-11!22;UBERON:0003894!1.29e-11!22;UBERON:0000476!3.26e-11!3;UBERON:0000920!3.26e-11!3;UBERON:0009854!4.95e-11!23;UBERON:0009497!5.28e-10!25;UBERON:0000015!5.28e-10!25;UBERON:0002423!5.28e-10!25;UBERON:0006235!5.28e-10!25;UBERON:0004161!5.28e-10!25;UBERON:0002368!9.88e-10!35;UBERON:0002365!1.64e-09!31;UBERON:0002330!1.64e-09!31;UBERON:0003929!2.48e-09!54;UBERON:0005911!4.23e-09!82;UBERON:0001041!9.27e-09!98;UBERON:0000949!1.69e-08!45;UBERON:0003124!3.73e-08!7;UBERON:0004921!5.80e-08!129;UBERON:0004185!5.80e-08!129;UBERON:0000077!6.04e-08!130;UBERON:0002530!5.24e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.69e-25;19!UBERON:0006925;1.69e-25;19!UBERON:0002423;3.13e-19;25!UBERON:0002365;1.12e-14;31!UBERON:0002330;1.12e-14;31!UBERON:0003124;3.50e-14;3!UBERON:0000920;3.50e-14;3!UBERON:0002368;8.67e-13;33!UBERON:0000949;7.07e-12;43!UBERON:0002417;9.34e-08;58!UBERON:0000916;9.34e-08;58!UBERON:0005172;2.02e-07;52!UBERON:0005173;2.02e-07;52!UBERON:0002530;8.07e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.69e-25,19;UBERON:0006925,1.69e-25,19;UBERON:0008836,1.69e-25,19;UBERON:0007499,4.74e-25,25;UBERON:0009856,4.71e-24,26;UBERON:0008835,6.14e-22,22;UBERON:0003894,6.14e-22,22;UBERON:0009854,5.87e-21,23;UBERON:0009497,3.13e-19,25;UBERON:0000015,3.13e-19,25;UBERON:0002423,3.13e-19,25;UBERON:0006235,3.13e-19,25;UBERON:0004161,3.13e-19,25;UBERON:0002365,2.21e-15,31;UBERON:0002330,2.21e-15,31;UBERON:0000920,3.39e-14,3;UBERON:0003929,6.45e-14,54;UBERON:0002368,1.51e-13,35;UBERON:0000949,2.09e-13,45;UBERON:0005172,5.10e-11,54;UBERON:0005173,5.10e-11,54;UBERON:0005911,7.13e-11,82;UBERON:0002530,5.02e-10,59;UBERON:0002417,8.05e-10,60;UBERON:0000916,8.05e-10,60;UBERON:0005177,1.58e-08,101;UBERON:0004921,4.86e-07,118 | |||
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| ||
|short_description=p@chr14:105233283..105233290,- | |||
}} | }} |
Latest revision as of 18:27, 24 July 2015
Short description: | p@chr14:105233283..105233290, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:105233283..105233290, - |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.82e-21 | 12 |
chorionic membrane mesenchymal stem cell | 3.39e-14 | 3 |
endodermal cell | 7.21e-13 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.69e-25 | 19 |
digestive gland | 1.69e-25 | 19 |
liver bud | 1.69e-25 | 19 |
epithelial sac | 4.74e-25 | 25 |
sac | 4.71e-24 | 26 |
hepatic diverticulum | 6.14e-22 | 22 |
liver primordium | 6.14e-22 | 22 |
digestive tract diverticulum | 5.87e-21 | 23 |
epithelium of foregut-midgut junction | 3.13e-19 | 25 |
anatomical boundary | 3.13e-19 | 25 |
hepatobiliary system | 3.13e-19 | 25 |
foregut-midgut junction | 3.13e-19 | 25 |
septum transversum | 3.13e-19 | 25 |
exocrine gland | 2.21e-15 | 31 |
exocrine system | 2.21e-15 | 31 |
egg chorion | 3.39e-14 | 3 |
gut epithelium | 6.45e-14 | 54 |
endocrine gland | 1.51e-13 | 35 |
endocrine system | 2.09e-13 | 45 |
abdomen element | 5.10e-11 | 54 |
abdominal segment element | 5.10e-11 | 54 |
endo-epithelium | 7.13e-11 | 82 |
gland | 5.02e-10 | 59 |
abdominal segment of trunk | 8.05e-10 | 60 |
abdomen | 8.05e-10 | 60 |
trunk region element | 1.58e-08 | 101 |
subdivision of digestive tract | 4.86e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 5.43e-11 | 1 |
endocrine pancreas cancer | 5.43e-11 | 1 |
pancreatic endocrine carcinoma | 5.43e-11 | 1 |