FFCP PHASE1:Hg19::chr14:54317486..54317491,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=108bp_to_ENST00000418927_5end | |association_with_transcript=108bp_to_ENST00000418927_5end | ||
|cluster_id=chr14:54317486..54317491,- | |||
|coexpression_cluster_id=C3432 | |coexpression_cluster_id=C3432 | ||
|description=CAGE_peak_4_at_ENST00000418927_5end | |description=CAGE_peak_4_at_ENST00000418927_5end | ||
|id=chr14:54317486..54317491,- | |id=chr14:54317486..54317491,- | ||
|ontology_enrichment_celltype=CL:0002097!3.16e-18!2;CL:0000174!1.78e-12!3;CL:0000223!7.83e-11!59;CL:0000066!1.64e-10!254;CL:0002563!5.31e-10!4;CL:0002076!1.88e-09!43;CL:0000077!1.98e-07!19;CL:0002251!4.34e-07!21 | |ontology_enrichment_celltype=CL:0002097!3.16e-18!2;CL:0000174!1.78e-12!3;CL:0000223!7.83e-11!59;CL:0000066!1.64e-10!254;CL:0002563!5.31e-10!4;CL:0002076!1.88e-09!43;CL:0000077!1.98e-07!19;CL:0002251!4.34e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002253;5.04e-34;2!CL:0002251;1.56e-30;20!CL:0002178;3.27e-23;3!CL:0002563;8.69e-18;4!CL:0002076;2.86e-14;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,5.04e-34,2;CL:0002251,1.56e-30,20;CL:0002178,4.09e-23,3;CL:0002563,8.69e-18,4;CL:0002076,3.52e-15,42;CL:0000223,2.67e-11,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.71e-16!106;DOID:299!3.04e-12!25;DOID:0050687!4.06e-11!143;DOID:3111!5.30e-10!1;DOID:3603!5.30e-10!1;DOID:3112!8.24e-10!1;DOID:162!6.37e-09!235;DOID:14566!1.13e-08!239;DOID:7!1.50e-07!39 | |ontology_enrichment_disease=DOID:305!6.71e-16!106;DOID:299!3.04e-12!25;DOID:0050687!4.06e-11!143;DOID:3111!5.30e-10!1;DOID:3603!5.30e-10!1;DOID:3112!8.24e-10!1;DOID:162!6.37e-09!235;DOID:14566!1.13e-08!239;DOID:7!1.50e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:3493;5.04e-34;2!DOID:3119;6.48e-20;14!DOID:299;1.09e-11;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,7.05e-34,2;DOID:3119,7.13e-20,14;DOID:299,1.15e-11,25 | |||
|ontology_enrichment_uberon=UBERON:0002369!1.78e-12!3;UBERON:0001235!1.78e-12!3;UBERON:0006858!1.78e-12!3;UBERON:0002294!7.56e-12!7;UBERON:0001173!7.56e-12!7;UBERON:0004912!7.56e-12!7;UBERON:0003929!8.66e-12!54;UBERON:0005911!4.63e-11!82;UBERON:0001052!5.08e-10!4;UBERON:0001242!5.31e-10!4;UBERON:0001262!5.31e-10!4;UBERON:0004786!5.31e-10!4;UBERON:0004808!5.31e-10!4;UBERON:0001277!5.31e-10!4;UBERON:0003112!8.99e-10!1;UBERON:0000032!8.99e-10!1;UBERON:0005253!8.99e-10!1;UBERON:0003128!8.99e-10!1;UBERON:0002241!8.99e-10!1;UBERON:0001703!8.99e-10!1;UBERON:0004761!8.99e-10!1;UBERON:0009617!8.99e-10!1;UBERON:0002394!1.07e-09!4;UBERON:0003928!1.07e-09!4;UBERON:0001007!1.30e-08!155;UBERON:0001555!1.30e-08!155;UBERON:0007026!1.30e-08!155;UBERON:0007499!1.61e-08!25;UBERON:0009497!1.64e-08!25;UBERON:0000015!1.64e-08!25;UBERON:0002423!1.64e-08!25;UBERON:0006235!1.64e-08!25;UBERON:0004161!1.64e-08!25;UBERON:0009856!3.47e-08!26;UBERON:0004907!3.48e-08!5;UBERON:0003350!3.61e-08!5;UBERON:0004921!9.67e-08!129;UBERON:0004185!9.67e-08!129;UBERON:0004119!1.06e-07!169;UBERON:0000925!1.06e-07!169;UBERON:0006595!1.06e-07!169;UBERON:0000060!2.85e-07!12;UBERON:0000344!3.17e-07!12 | |ontology_enrichment_uberon=UBERON:0002369!1.78e-12!3;UBERON:0001235!1.78e-12!3;UBERON:0006858!1.78e-12!3;UBERON:0002294!7.56e-12!7;UBERON:0001173!7.56e-12!7;UBERON:0004912!7.56e-12!7;UBERON:0003929!8.66e-12!54;UBERON:0005911!4.63e-11!82;UBERON:0001052!5.08e-10!4;UBERON:0001242!5.31e-10!4;UBERON:0001262!5.31e-10!4;UBERON:0004786!5.31e-10!4;UBERON:0004808!5.31e-10!4;UBERON:0001277!5.31e-10!4;UBERON:0003112!8.99e-10!1;UBERON:0000032!8.99e-10!1;UBERON:0005253!8.99e-10!1;UBERON:0003128!8.99e-10!1;UBERON:0002241!8.99e-10!1;UBERON:0001703!8.99e-10!1;UBERON:0004761!8.99e-10!1;UBERON:0009617!8.99e-10!1;UBERON:0002394!1.07e-09!4;UBERON:0003928!1.07e-09!4;UBERON:0001007!1.30e-08!155;UBERON:0001555!1.30e-08!155;UBERON:0007026!1.30e-08!155;UBERON:0007499!1.61e-08!25;UBERON:0009497!1.64e-08!25;UBERON:0000015!1.64e-08!25;UBERON:0002423!1.64e-08!25;UBERON:0006235!1.64e-08!25;UBERON:0004161!1.64e-08!25;UBERON:0009856!3.47e-08!26;UBERON:0004907!3.48e-08!5;UBERON:0003350!3.61e-08!5;UBERON:0004921!9.67e-08!129;UBERON:0004185!9.67e-08!129;UBERON:0004119!1.06e-07!169;UBERON:0000925!1.06e-07!169;UBERON:0006595!1.06e-07!169;UBERON:0000060!2.85e-07!12;UBERON:0000344!3.17e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0006562;5.04e-34;2!UBERON:0001052;8.69e-18;4!UBERON:0001242;8.69e-18;4!UBERON:0001262;8.69e-18;4!UBERON:0004786;8.69e-18;4!UBERON:0004808;8.69e-18;4!UBERON:0001277;8.69e-18;4!UBERON:0004921;7.13e-17;33!UBERON:0000945;1.60e-14;5!UBERON:0010039;1.60e-14;5!UBERON:0004907;1.60e-14;5!UBERON:0005409;1.33e-12;22!UBERON:0000485;8.99e-11;7!UBERON:0003929;8.99e-11;7!UBERON:0003350;1.35e-09;8!UBERON:0001155;1.12e-08;9!UBERON:0000059;2.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,8.69e-18,4;UBERON:0001242,8.69e-18,4;UBERON:0001262,8.69e-18,4;UBERON:0004786,8.69e-18,4;UBERON:0004808,8.69e-18,4;UBERON:0001277,8.69e-18,4;UBERON:0004907,1.60e-14,5;UBERON:0005409,2.91e-11,25;UBERON:0003350,1.35e-09,8;UBERON:0000945,1.47e-09,8;UBERON:0010039,1.47e-09,8;UBERON:0001155,1.12e-08,9;UBERON:0000485,1.12e-08,9;UBERON:0006562,2.32e-07,11;UBERON:0000059,2.47e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449341755736634,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,1.41353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202210631562555,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,1.91643641459393,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,1.07965256976767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449341755736634,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,1.41353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202210631562555,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,1.91643641459393,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,1.07965256976767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@ENST00000418927 | |short_description=p4@ENST00000418927 | ||
}} | }} |
Latest revision as of 21:10, 24 July 2015
Short description: | p4@ENST00000418927 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000418927_5end |
Coexpression cluster: | C3432_pharyngeal_signet_serous_bile_rectal_clear_mucinous |
Association with transcript: | 108bp_to_ENST00000418927_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 5.04e-34 | 2 |
epithelial cell of alimentary canal | 1.56e-30 | 20 |
epithelial cell of stomach | 4.09e-23 | 3 |
intestinal epithelial cell | 8.69e-18 | 4 |
endo-epithelial cell | 3.52e-15 | 42 |
endodermal cell | 2.67e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
rectum | 8.69e-18 | 4 |
intestinal mucosa | 8.69e-18 | 4 |
wall of intestine | 8.69e-18 | 4 |
gastrointestinal system mucosa | 8.69e-18 | 4 |
gastrointestinal system epithelium | 8.69e-18 | 4 |
intestinal epithelium | 8.69e-18 | 4 |
lower digestive tract | 1.60e-14 | 5 |
gastrointestinal system | 2.91e-11 | 25 |
epithelium of mucosa | 1.35e-09 | 8 |
stomach | 1.47e-09 | 8 |
food storage organ | 1.47e-09 | 8 |
colon | 1.12e-08 | 9 |
simple columnar epithelium | 1.12e-08 | 9 |
pharynx | 2.32e-07 | 11 |
large intestine | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 7.05e-34 | 2 |
gastrointestinal system cancer | 7.13e-20 | 14 |
adenocarcinoma | 1.15e-11 | 25 |