FFCP PHASE1:Hg19::chr14:55569920..55569970,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:55569920..55569970,- | |||
|description=CAGE_peak_at_chr14:55569920..55569970,- | |description=CAGE_peak_at_chr14:55569920..55569970,- | ||
|id=chr14:55569920..55569970,- | |id=chr14:55569920..55569970,- | ||
|ontology_enrichment_celltype=CL:0000860!1.69e-12!45;CL:0002057!1.55e-11!42;CL:0000066!6.07e-09!254;CL:0002009!8.06e-08!65;CL:0002076!1.70e-07!43;CL:0000223!2.93e-07!59;CL:0002194!3.69e-07!63;CL:0000576!3.69e-07!63;CL:0000040!3.69e-07!63;CL:0000559!3.69e-07!63;CL:0000557!4.70e-07!71 | |ontology_enrichment_celltype=CL:0000860!1.69e-12!45;CL:0002057!1.55e-11!42;CL:0000066!6.07e-09!254;CL:0002009!8.06e-08!65;CL:0002076!1.70e-07!43;CL:0000223!2.93e-07!59;CL:0002194!3.69e-07!63;CL:0000576!3.69e-07!63;CL:0000040!3.69e-07!63;CL:0000559!3.69e-07!63;CL:0000557!4.70e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.00e-19;33!CL:0002057;8.00e-19;33!CL:0000473;1.72e-12;39!CL:0000234;1.72e-12;39!CL:0000576;2.54e-11;48!CL:0000766;7.41e-07;69 | |ontology_enrichment_celltype_v019=CL:0000860;8.00e-19;33!CL:0002057;8.00e-19;33!CL:0000473;1.72e-12;39!CL:0000234;1.72e-12;39!CL:0000576;2.54e-11;48!CL:0000766;7.41e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.49e-19,42;CL:0002057,1.49e-19,42;CL:0000473,3.25e-16,48;CL:0000234,3.25e-16,48;CL:0002009,1.87e-13,61;CL:0002194,9.78e-13,59;CL:0000576,9.78e-13,59;CL:0000040,9.78e-13,59;CL:0000559,9.78e-13,59;CL:0000557,1.26e-11,67;CL:0000766,2.54e-11,72;CL:0000839,1.09e-10,66 | |||
|ontology_enrichment_development_v019=CL:0002057;6.69e-14;42 | |ontology_enrichment_development_v019=CL:0002057;6.69e-14;42 | ||
|ontology_enrichment_disease=DOID:305!2.50e-15!106;DOID:0050687!1.43e-10!143;DOID:1749!2.33e-07!14 | |ontology_enrichment_disease=DOID:305!2.50e-15!106;DOID:0050687!1.43e-10!143;DOID:1749!2.33e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.50e-11;14 | |ontology_enrichment_disease_v019=DOID:1749;1.50e-11;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,2.08e-11,14;DOID:305,5.88e-11,106;DOID:0050687,3.11e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.06e-09!169;UBERON:0000925!1.06e-09!169;UBERON:0006595!1.06e-09!169;UBERON:0000062!8.30e-09!511;UBERON:0001007!8.60e-09!155;UBERON:0001555!8.60e-09!155;UBERON:0007026!8.60e-09!155;UBERON:0004921!8.82e-08!129;UBERON:0004185!8.82e-08!129;UBERON:0005153!1.67e-07!37;UBERON:0000077!2.33e-07!130;UBERON:0008947!8.00e-07!38;UBERON:0003258!8.00e-07!38 | |ontology_enrichment_uberon=UBERON:0004119!1.06e-09!169;UBERON:0000925!1.06e-09!169;UBERON:0006595!1.06e-09!169;UBERON:0000062!8.30e-09!511;UBERON:0001007!8.60e-09!155;UBERON:0001555!8.60e-09!155;UBERON:0007026!8.60e-09!155;UBERON:0004921!8.82e-08!129;UBERON:0004185!8.82e-08!129;UBERON:0005153!1.67e-07!37;UBERON:0000077!2.33e-07!130;UBERON:0008947!8.00e-07!38;UBERON:0003258!8.00e-07!38 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.03e-10,76;UBERON:0001474,3.75e-09,82;UBERON:0004765,9.50e-08,90;UBERON:0002405,2.73e-07,93;UBERON:0002390,3.09e-07,98;UBERON:0003061,3.09e-07,98;UBERON:0005631,3.30e-07,14;UBERON:0000158,3.30e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.09340350391728,0.436882744260345,0,0.618831764800233,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0,0.492484232307152,0.204000691244253,0.313454721478088,0,0.410623275218653,0,0,0,0.0787107813136792,1.57345710739562,0.767658796194425,2.01260960310899,0,0.30120591877825,0.369754010166788,0,0,0,3.87796785972314,2.4065333696417,1.08505435357926,0,0,0,3.05336301437086,0,2.42584061187816,1.85943229524548,2.05583944010913,5.26500830521676,0.863077176966451,0.512321413058201,2.12834006899727,1.72372840368309,3.22742341791913,1.35426486594342,2.25890807451126,2.45615535052061,4.26974620445661,1.83650335422542,1.28371610830437,2.55734850319616,0.329851300186716,0.797854630486527,1.27867425159808,0.580418477257168,1.13477044938228,0.622822248995575,1.00499466102697,1.0429658368404,3.47502151528187,0.605399502633369,0.368277635987565,1.26584954976354,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0,0.167186495390678,0,0.473447805734733,0,0.334231370655521,0,0.443067789167242,0,0.512365278902701,0.520237390239513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0.144824403882799,0,1.34140171940727,0.12786256184353,0,0,0.144846518960824,0,0,0.189069634328136,0,0.175669571386252,0.589405839739707,1.82147644146271,1.48313777113772,0.649094787309367,1.21890816109487,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.794455084879313,0.573673241497627,0.354668382198357,0,0,0,0.622422070799533,0,0,0.151357427644931,0,2.10889288650417,0,0.570471821544449,0,0,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0,0.910161361938026,0,0,0,0,0.438977620880838,0,0,0,0.538168907066586,0.427114777637135,0,0.600182192168805,0.92747276314595,0.772921620136887,0.18611685633159,0.337552664482532,0,0.504867548488229,0.184099797284599,0.323292113637624,0,0.10075209822764,0.508681776931463,0.57978255948989,0.545492241181669,0.573609190778008,0,0.132529768321485,0,0,0,0,0,0,1.38134921352481,0,0.721879481669586,1.0647612003586,1.51726221070292,0.241011029883482,0.55146986366197,0.653638332277218,0.71181185733329,0.808987848960987,1.17732879075208,1.53898862778556,0,0,0,0,0,0,0,0,12.4218322928545,0,0.439001141634502,1.1240175325762,0.603173834469785,0.740707561268237,0.651616610620649,1.03993478527958,0,0.115930404975077,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,7.11183958163348,4.29243081047436,0,0,0.148631162288728,0.93733833986777,0.335964256397719,0.425325291727159,1.25381931783988,1.45316969256981,0.383382679165211,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,0,0,0,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0,0,0,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0,0.300946099727719,0,0,0,0,0.521301686808497,0,0,0,0.215714200818617,0.106727557803444,1.21251028578504,1.66435439510497,1.5119514666484,0,0.153461973288062,0.280660094433074,0,0,0,0,0.462629081407967,0.177561725313127,0.328508624055237,0,0,8.33930202182193,0.200506470303285,0.276242966807689,0.68888668898764,1.27463817604702,0.393373244878272,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.671624264166535,0.219259876645935,0,0,0,0,0.412164046590889,0,0,0.574265537996172,1.30012049207304,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0.322260734604821,0.290033387828457,0.340906509664404,0.0890320356467374,0.330569830721956,0.576570202095319,0.893288987462089,1.0115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.539617372749944,0.274537029736055,0.235624804691373,0,0,0,0.48763373908959,0,0,0.682499557039929,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,1.06428319221179,0.211107635297664,0,1.13841952129715,0,0.192444225451024,1.34060455107157,1.08890984861323,0.282431402330337,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0,0,0,0,0.320472213382419,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0.390776190804081,0,0,0,0,0,1.49712432326576,0.146508179271894,0,0,0,1.67121139316383,2.67268212749375,2.45728561679386,0,0,0.222617410045812,3.13127361030843,0.422250816255987,0.996239941255349,0.828851746593443,0,0.613612095012929,0.369254416383208,0,0.629078458031288,2.32727527078292,0,0,0,0,0,0,0,2.86470537193757,0.874599999961957,0.724999575434793,1.137934482855,1.27126825146383,0.945550727071745,0,0,0,0,0,0,0,0,0,0.762569244632931,0.975966209950223,0.461701551022782,0.227884111694002,0.922255617552241,2.42345639906385,6.19290019955446,0.638002319463839,0.183195186803725,1.5991043280559,1.02193298195737,0,0,0.902382642468723,0.392125068635479,0.167821586975843,0.569261198172555,0,0,0.163232808159148,5.65412285735763,0,1.9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| ||
|short_description=p@chr14:55569920..55569970,- | |short_description=p@chr14:55569920..55569970,- | ||
}} | }} |
Latest revision as of 21:16, 24 July 2015
Short description: | p@chr14:55569920..55569970, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:55569920..55569970, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.49e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.49e-19 | 42 |
defensive cell | 3.25e-16 | 48 |
phagocyte | 3.25e-16 | 48 |
macrophage dendritic cell progenitor | 1.87e-13 | 61 |
monopoietic cell | 9.78e-13 | 59 |
monocyte | 9.78e-13 | 59 |
monoblast | 9.78e-13 | 59 |
promonocyte | 9.78e-13 | 59 |
granulocyte monocyte progenitor cell | 1.26e-11 | 67 |
myeloid leukocyte | 2.54e-11 | 72 |
myeloid lineage restricted progenitor cell | 1.09e-10 | 66 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.03e-10 | 76 |
bone element | 3.75e-09 | 82 |
skeletal element | 9.50e-08 | 90 |
immune system | 2.73e-07 | 93 |
hematopoietic system | 3.09e-07 | 98 |
blood island | 3.09e-07 | 98 |
extraembryonic membrane | 3.30e-07 | 14 |
membranous layer | 3.30e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.08e-11 | 14 |
carcinoma | 5.88e-11 | 106 |
cell type cancer | 3.11e-07 | 143 |