FFCP PHASE1:Hg19::chr14:61439275..61439291,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-91bp_to_ENST00000556317_5end | |association_with_transcript=-91bp_to_ENST00000556317_5end | ||
|cluster_id=chr14:61439275..61439291,- | |||
|description=CAGE_peak_1_at_ENST00000556317_5end | |description=CAGE_peak_1_at_ENST00000556317_5end | ||
|id=chr14:61439275..61439291,- | |id=chr14:61439275..61439291,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;7.25e-16;2!CL:0000242;7.25e-16;2!CL:0000511;8.65e-09;1!CL:0002625;8.65e-09;1!CL:0000222;8.65e-09;1!CL:0000216;8.65e-09;1!CL:0002599;8.65e-09;1!CL:0000312;7.24e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.02e-16,2;CL:0002599,3.31e-09,1;CL:0000511,3.87e-09,1;CL:0002625,3.87e-09,1;CL:0000216,3.87e-09,1;CL:0000312,6.27e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!8.30e-14!235;DOID:14566!2.42e-13!239;DOID:2531!2.48e-10!51;DOID:0060083!2.48e-10!51;DOID:0050686!1.63e-08!137;DOID:1240!1.88e-07!39;DOID:0050687!2.47e-07!143 | |ontology_enrichment_disease=DOID:162!8.30e-14!235;DOID:14566!2.42e-13!239;DOID:2531!2.48e-10!51;DOID:0060083!2.48e-10!51;DOID:0050686!1.63e-08!137;DOID:1240!1.88e-07!39;DOID:0050687!2.47e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:3151;8.65e-09;1!DOID:3149;8.65e-09;1!DOID:2355;8.65e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.58e-09,1;DOID:3149,3.58e-09,1;DOID:2355,6.65e-09,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;8.65e-09;1!UBERON:0001343;8.65e-09;1!UBERON:0004910;8.65e-09;1!UBERON:0004813;8.65e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.87e-09,1;UBERON:0001343,3.87e-09,1;UBERON:0004910,3.87e-09,1;UBERON:0005154,3.87e-09,1;UBERON:0005295,3.87e-09,1;UBERON:0004813,3.87e-09,1;UBERON:0005297,3.87e-09,1;UBERON:0005294,3.87e-09,1;UBERON:0010141,3.87e-09,1;UBERON:0005891,3.87e-09,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,1.26343974685366,0.522371256399677,0.245733936501509,0,0.218441372130172,0,0.247532705920093,0,0,0,0,0,0,0,0,0.572471974262113,0.547497700291537,0.627713197974014,0.458480434487708,0.492603536699674,0.393553906568396,0,0,0.464448369948228,0,0,0,1.23947520928483,0.284338464974843,0.293600439334847,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0,0,0.209658645508376,0,0.150176892841506,0,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.790152254325231,0.196709770113833,0,0,0,0,0,0,0.222820913770347,0,0.221533894583621,0,0.640456598628376,0.520237390239513,0.493313713811028,0.552700035571697,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0.670700859703636,0.255725123687061,0,0,0.434539556882471,0,0,0.472674085820339,0,0.790513071238134,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0.446498641420399,0.22452937262617,0,1.53316637465883,0,0.366403487860815,0,0,0.872188104285069,0.496971951695318,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0.576175924479999,0,0.936480230490962,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0.204154171254893,0.368502951935304,0,0,0.494533858557114,0,0,0.168336113954066,0.375355559615893,0.277064115484183,0.438977620880838,0.30648779579902,0.300476117813194,0.680593098960126,0,0,0,0,0,0,0.18611685633159,0.337552664482532,0,0,0,0,0,0.10075209822764,0.508681776931463,0,0,0,0,0.132529768321485,0,0.10366105501537,0.504641701751257,0,1.56449532329816,0,0,0.464367928031979,0,0.591534000199219,0.337169380156203,0.241011029883482,0.55146986366197,0.435758888184812,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0.201057944823262,0.277765335475589,0,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0.462985512576611,0.190254152234598,1.58040879591855,0.858486162094873,0,0,0,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0.352193736052904,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,1.02882949704857,0,0,0.428933980974443,0,0.823240336780769,0,0.355391948742546,0.791951872933429,0.301439377059586,0,0,1.2162378064119,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0.672510863961164,0,0.215627574859517,0,0.254094624222463,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0.664225598535437,0.184369168541703,0.347534457872331,0,0,0,0.215714200818617,0,0,0,0.907170879989041,0.248107807818777,0,0.280660094433074,0,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.362578348774867,0,0.276242966807689,0.114814448164607,0.182091168006717,0.131124414959424,0,0.0770153371044148,1.56869953835371,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0,0.438519753291869,1.3071772551245,0,0,0,0,0.457847324091717,0.247528499761764,0,0,1.6068392984416,0.193341436584244,0,0,0,0.537101224341368,0,0.426133137080504,0.356128142586949,0.165284915360978,0,0.127612712494584,0.30347334256665,0,0,0.6970372701606,0.308033580176089,0,0,0,0,0.372158369359667,0.632758849437452,0.190630193923825,0.255897791311334,0.855877976067841,0,0,0.179872457583315,0,0.235624804691373,0,0,0,1.95053495635836,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0.860468113224309,0.294747123039363,0,0,0.422215270595328,0,0,0,0.288666338176536,0,0,0,0.43050537267123,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,1.22520107990516,0.371606350251437,0.721346064882224,0.497992903438899,1.11598390910176,0.59873811429845,0,0,0.324621940274555,0.561594356226918,0.912938716132769,0.626719583092093,0,0.338583555603207,0.963528450622197,0.201799707191048,0.425846237690326,0,0,1.11838053946208,0.667396566847634,0.781552381608161,0.835218521685727,0,0.540911356951966,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0.140669416410513,0.111308705022906,0.494411622680279,0.63337622438398,0,0.552567831062295,0.503865495708552,0.102268682502155,0.123084805461069,0,0.269605053441981,0.179021174675609,1.02314474045374,0.197286811273867,0,0,0.969332746095218,0.0927680981618513,0,0.520855522170466,0.262379999988587,0,0.455173793141999,0,0.236387681767936,0.344743373241465,1.16641845353302,0.173624994933292,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0,0,0.139423744278603,0.307801034015188,0.113942055847001,0.23056390438806,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0.627921025580099,0.664846727600626,0.225595660617181,0,0.167821586975843,0.37950746544837,0.476809736941136,0,0,0.141353071433941,0.649165919226273,0,0.176915129006678,0.611030144933625,0,0,0.208843899010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| ||
|short_description=p1@ENST00000556317 | |short_description=p1@ENST00000556317 | ||
}} | }} |
Latest revision as of 21:35, 24 July 2015
Short description: | p1@ENST00000556317 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000556317_5end |
Coexpression cluster: | NA |
Association with transcript: | -91bp_to_ENST00000556317_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.02e-16 | 2 |
smooth muscle cell of the esophagus | 3.31e-09 | 1 |
androgen binding protein secreting cell | 3.87e-09 | 1 |
seminiferous tubule epithelial cell | 3.87e-09 | 1 |
Sertoli cell | 3.87e-09 | 1 |
keratinocyte | 6.27e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 3.87e-09 | 1 |
seminiferous tubule of testis | 3.87e-09 | 1 |
epithelium of male gonad | 3.87e-09 | 1 |
epithelial cord | 3.87e-09 | 1 |
sex cord | 3.87e-09 | 1 |
seminiferous tubule epithelium | 3.87e-09 | 1 |
testis sex cord | 3.87e-09 | 1 |
genital ridge | 3.87e-09 | 1 |
primitive sex cord of indifferent gonad | 3.87e-09 | 1 |
coelomic epithelium | 3.87e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.58e-09 | 1 |
keratoacanthoma | 3.58e-09 | 1 |
anemia | 6.65e-09 | 1 |