FFCP PHASE1:Hg19::chr15:39889413..39889446,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:39889413..39889446,+
|short_description=p3@BC015134
|description=CAGE_peak_3_at_BC015134_5end
|association_with_transcript=-333bp_to_BC015134_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-333bp_to_BC015134_5end | |||
|cluster_id=chr15:39889413..39889446,+ | |||
|coexpression_cluster_id=C453 | |||
|description=CAGE_peak_3_at_BC015134_5end | |||
|id=chr15:39889413..39889446,+ | |||
|ontology_enrichment_celltype=CL:0000222!6.37e-13!119;CL:0002139!1.27e-11!24;CL:0000115!3.83e-11!35;CL:0000071!5.97e-11!18;CL:0002546!5.97e-11!18;CL:0002078!5.05e-10!44;CL:0000055!1.84e-09!180;CL:0000359!2.24e-08!32;CL:0000220!2.03e-07!246;CL:0000192!2.21e-07!42;CL:0000514!2.21e-07!42;CL:0002321!3.30e-07!248;CL:0000057!3.67e-07!75;CL:0000680!4.28e-07!57;CL:0000056!4.28e-07!57;CL:0000355!4.28e-07!57;CL:0000213!6.72e-07!57;CL:0000215!6.72e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.65e-13;24!CL:0000071;2.73e-13;18!CL:0000115;1.88e-11;36!CL:1000413;5.19e-08;9!CL:0002078;2.85e-07;45!CL:0000359;9.10e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.52e-13,36;CL:0002139,1.98e-13,24;CL:0000071,2.39e-13,18;CL:0002546,2.39e-13,18;CL:0002078,3.11e-11,45;CL:0000222,2.85e-10,121;CL:1000413,4.88e-08,9;CL:0000213,1.01e-07,58;CL:0000215,1.01e-07,58;CL:0000057,1.74e-07,76;CL:0000359,4.00e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002546;2.73e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001981!6.90e-21!60;UBERON:0007500!6.90e-21!60;UBERON:0004537!6.90e-21!60;UBERON:0006965!6.90e-21!60;UBERON:0000055!7.06e-21!69;UBERON:0002049!9.69e-19!79;UBERON:0007798!9.69e-19!79;UBERON:0004872!2.10e-18!84;UBERON:0000468!5.67e-15!659;UBERON:0001637!1.37e-14!42;UBERON:0003509!1.37e-14!42;UBERON:0004572!1.37e-14!42;UBERON:0003914!1.64e-14!118;UBERON:0001009!5.46e-14!113;UBERON:0000480!9.72e-14!626;UBERON:0000467!1.16e-13!625;UBERON:0000490!2.13e-13!138;UBERON:0004535!3.74e-13!110;UBERON:0000487!2.84e-11!22;UBERON:0001986!5.97e-11!18;UBERON:0004638!5.97e-11!18;UBERON:0004852!5.97e-11!18;UBERON:0004573!6.29e-11!33;UBERON:0004571!6.29e-11!33;UBERON:0006914!5.11e-10!25;UBERON:0000486!4.54e-09!82;UBERON:0002100!4.63e-09!216;UBERON:0000926!1.05e-08!448;UBERON:0004120!1.05e-08!448;UBERON:0006603!1.05e-08!448;UBERON:0000947!1.57e-08!21;UBERON:0010191!1.57e-08!21;UBERON:0002385!9.19e-08!63;UBERON:0001015!9.19e-08!63;UBERON:0000383!9.19e-08!63;UBERON:0000914!1.24e-07!83;UBERON:0002329!1.24e-07!83;UBERON:0003077!1.24e-07!83;UBERON:0003059!1.24e-07!83;UBERON:0007282!1.24e-07!83;UBERON:0009618!1.24e-07!83;UBERON:0007285!1.24e-07!83;UBERON:0001134!1.67e-07!61;UBERON:0002036!1.67e-07!61;UBERON:0003082!1.67e-07!61;UBERON:0004290!2.17e-07!70;UBERON:0004111!5.48e-07!241;UBERON:0000477!6.49e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.73e-13;18!UBERON:0001986;2.73e-13;18!UBERON:0004852;2.73e-13;18!UBERON:0000487;3.58e-13;22!UBERON:0001637;1.18e-12;42!UBERON:0003509;1.18e-12;42!UBERON:0004572;1.18e-12;42!UBERON:0007500;6.16e-12;56!UBERON:0001981;6.16e-12;56!UBERON:0004537;6.16e-12;56!UBERON:0006914;2.19e-11;25!UBERON:0004573;4.90e-11;33!UBERON:0004571;4.90e-11;33!UBERON:0000055;2.08e-10;65!UBERON:0000947;1.68e-09;21!UBERON:0010191;1.68e-09;21!UBERON:0000490;2.22e-09;33!UBERON:0003915;5.19e-08;9!UBERON:0004700;5.19e-08;9!UBERON:0001917;5.19e-08;9!UBERON:0003914;6.94e-08;74!UBERON:0002049;2.79e-07;75!UBERON:0007798;2.79e-07;75 | |||
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|phase1_expression=7.44881355009282,1.71280419112787,3.38290569830331,7.00513088471913,8.49226079411847,17.4467704820074,7.59899634504932,0.631719873426831,0.522371256399677,1.72013755551056,1.39560233594486,2.83973783769224,2.90143676051299,0.618831764800233,0.994192127183747,12.101852636132,5.42425075221579,7.30310090387373,19.5173119516203,0,1.22400414746552,0.626909442956176,0,0,1.12988375635323,0,0,0,0.393364276848904,0.767658796194425,0.928896739896456,3.67768489791571,9.0361775633475,0.739508020333575,0,0,0,2.76997704265939,15.4419224552009,2.60413044859022,0,0.32389366601898,1.80302897343931,2.32637182047304,0,0.485168122375632,16.7348906572093,3.28934310417461,0,12.3707728698525,0.512321413058201,1.18241114944293,14.1345729102014,0,0,3.9530891303947,0.545812300115692,0.898893937780338,10.4068523406107,1.28371610830437,0.639337125799041,13.1940520074686,0.598390972864896,1.27867425159808,13.3496249769149,10.2129340444405,3.11411124497787,9.2962006144995,3.12889751052121,0.434377689410233,11.502590550034,0.368277635987565,0.316462387440884,0,0,0,0.22465726229299,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,7.31420598941885,0,1.15076305659177,1.0843174571537,2.50668955317945,1.30361867064741,0,6.32625331393427,0.189069634328136,0.665188192387692,0.175669571386252,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,18.6836662924703,13.763753521698,36.1026121671898,39.5715559346807,15.9409785759764,6.87795104850169,5.8518590630307,0.775250277507987,1.06729878806013,1.33888245105868,7.25092770796465,22.0478910658369,4.88124115096339,33.0896772311282,17.012980905517,2.76829157680647,44.4568157799816,37.1617885594963,6.13266549863533,4.74632829784064,21.8010075277185,0,0,0.436094052142534,209.722163615424,2.40597972162702,3.31022952033047,2.0078563452417,3.90135220418193,1.68203280042692,19.2148192313469,11.5933747756065,0,0.269421344139376,2.28846664358842,0.151357427644931,1.15235184896,0,0.312160076830321,2.85235910772225,0.448346041655403,0,0.161872944368132,0,1.42907919878425,0.368502951935304,0.309977343527296,23.7600571456411,37.3373063210621,0,0.718618141816238,0,0,0,57.0670907145089,19.6152189311373,75.7199816889248,1.36118619792025,5.56107870635472,3.84403299873421,3.39091041855299,5.40163972951924,5.66788910811414,4.3798891807757,7.81690796592677,5.23206629947925,4.09235421677034,1.7670364197088,4.05019554026117,1.13152239773168,4.9701342952326,1.5112814734146,3.22165125389926,4.25173876959253,7.36414525595254,10.3249654340041,0,0.397589304964456,0,0.10366105501537,0,0.36497735907583,20.3384392028761,7.07565032012174,1.38134921352481,4.64367928031979,5.0531563716871,0.473227200159376,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0.474541238222193,0.269662616320329,0,0.38474715694639,2.95262181849859,4.20725321410337,0.4115740113314,1.47008711385542,1.26755034821831,0,1.77236972004421,0,0,0.343135620597051,0.548751427043128,0,1.10581869652794,0.740707561268237,0.325808305310325,1.03993478527958,1.44331342025273,0,0.469634776943287,2.7429625074604,9.25971025153221,6.08813287150714,0.790204397959275,0,0,0,0,0,3.35964256397719,1.70130116690864,4.03013352162817,0.871901815541886,2.68367875415648,0,0,0,0,0.12624243342638,0,0,0,0,0.308482478109971,0,0,0,0,0.07333828582095,4.91232519879556,0,0,2.39344304926383,0,0,0,0.266422179016099,0.428933980974443,1.08524321078289,1.64648067356154,0,0,0,0,0,0,0,0,0,1.67737398844108,0,28.5273810081437,1.59259437334337,3.08214483825575,2.50685348535854,0.112085143993527,0,0,0.128343036279748,0,0,0,0.670065061337395,0,0,0,0,0.36807447515742,0.500170521059677,0,25.1644742452277,35.328939781838,34.8522337224996,43.5766063772893,10.8340595901979,2.27407504055985,7.24311499047534,0,6.26855173041791,1.39013783148933,0,0,1.44737618286021,0.215714200818617,0.74709290462411,1.21251028578504,0,0.30239029332968,4.96215615637554,21.0242903404646,5.3325417942284,3.20347873139252,6.65219423786715,11.5814823223397,7.42090332224955,0.771048469013278,0.177561725313127,0.657017248110473,1.55776328755086,0.348631135379878,0,0.802025881213139,0.0920809889358963,0.68888668898764,0.182091168006717,0.524497659837696,0,0,0,0,0,2.27466768141793,3.91215522135986,15.1141141271498,4.62681758070868,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.618246069886334,0.457847324091717,0,0,0.650060246036521,4.82051789532479,0.386682873168488,0.154048617114644,0.460511024178389,0.827019434907183,0,0.435050081742686,0.426133137080504,0.178064071293475,0.661139661443912,17.6814861975898,7.78437546216963,1.71968227454435,0.464845549297286,3.1481234683064,6.970372701606,0.308033580176089,2.66153015158511,6.08953094452551,2.96518750566272,7.44249411058354,0.744316738719335,1.89827654831236,0.38126038784765,0.511795582622668,1.28381696410176,0,5.49464048139461,2.15846949099978,0,0.3534372070370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| ||
|short_description=p3@BC015134 | |||
}} | }} |
Latest revision as of 01:23, 25 July 2015
Short description: | p3@BC015134 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BC015134_5end |
Coexpression cluster: | C453_hepatic_Ewing_neurofibroma_spindle_tridermal_Olfactory_bone |
Association with transcript: | -333bp_to_BC015134_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.52e-13 | 36 |
endothelial cell of vascular tree | 1.98e-13 | 24 |
blood vessel endothelial cell | 2.39e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.39e-13 | 18 |
meso-epithelial cell | 3.11e-11 | 45 |
mesodermal cell | 2.85e-10 | 121 |
endothelial cell of artery | 4.88e-08 | 9 |
lining cell | 1.01e-07 | 58 |
barrier cell | 1.01e-07 | 58 |
fibroblast | 1.74e-07 | 76 |
vascular associated smooth muscle cell | 4.00e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
epithelial tube open at both ends | 1.92e-21 | 59 |
blood vessel | 1.92e-21 | 59 |
blood vasculature | 1.92e-21 | 59 |
vascular cord | 1.92e-21 | 59 |
vessel | 2.80e-20 | 68 |
splanchnic layer of lateral plate mesoderm | 9.45e-18 | 83 |
vasculature | 9.50e-17 | 78 |
vascular system | 9.50e-17 | 78 |
artery | 2.56e-16 | 42 |
arterial blood vessel | 2.56e-16 | 42 |
arterial system | 2.56e-16 | 42 |
epithelial tube | 2.25e-14 | 117 |
blood vessel endothelium | 2.39e-13 | 18 |
endothelium | 2.39e-13 | 18 |
cardiovascular system endothelium | 2.39e-13 | 18 |
simple squamous epithelium | 2.40e-13 | 22 |
circulatory system | 1.02e-12 | 112 |
systemic artery | 8.32e-12 | 33 |
systemic arterial system | 8.32e-12 | 33 |
cardiovascular system | 8.74e-12 | 109 |
squamous epithelium | 1.74e-11 | 25 |
aorta | 1.90e-09 | 21 |
aortic system | 1.90e-09 | 21 |
unilaminar epithelium | 1.92e-09 | 148 |
lateral plate mesoderm | 8.94e-09 | 203 |
endothelial tube | 4.88e-08 | 9 |
arterial system endothelium | 4.88e-08 | 9 |
endothelium of artery | 4.88e-08 | 9 |
mesoderm | 6.65e-07 | 315 |
mesoderm-derived structure | 6.65e-07 | 315 |
presumptive mesoderm | 6.65e-07 | 315 |