FFCP PHASE1:Hg19::chr15:58576558..58576569,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:58576558..58576569,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr15:58576558..58576569,- | |description=CAGE_peak_at_chr15:58576558..58576569,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000244!1.88e-29!4;CL:0000731!1.88e-29!4;CL:0002328!5.01e-22!3;CL:0002621!8.90e-22!3;CL:0000223!6.49e-18!59;CL:0002076!1.18e-14!43;CL:0002368!2.34e-13!13;CL:0002202!9.03e-13!9;CL:0002632!9.03e-13!9;CL:0000066!1.61e-09!254;CL:0000313!2.13e-08!1;CL:1001319!4.07e-08!1;CL:1000600!4.07e-08!1 | |ontology_enrichment_celltype=CL:0000244!1.88e-29!4;CL:0000731!1.88e-29!4;CL:0002328!5.01e-22!3;CL:0002621!8.90e-22!3;CL:0000223!6.49e-18!59;CL:0002076!1.18e-14!43;CL:0002368!2.34e-13!13;CL:0002202!9.03e-13!9;CL:0002632!9.03e-13!9;CL:0000066!1.61e-09!254;CL:0000313!2.13e-08!1;CL:1001319!4.07e-08!1;CL:1000600!4.07e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000244;1.12e-22;4!CL:0000731;1.12e-22;4!CL:0000182;3.84e-17;12 | |ontology_enrichment_celltype_v019=CL:0000244;1.12e-22;4!CL:0000731;1.12e-22;4!CL:0000182;3.84e-17;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.00e-22,4;CL:0000731,1.00e-22,4;CL:0000182,4.05e-17,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2152!2.13e-08!1 | |ontology_enrichment_disease=DOID:2152!2.13e-08!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!8.22e-36!5;UBERON:0005910!7.69e-30!6;UBERON:0004815!5.01e-22!3;UBERON:0002031!5.01e-22!3;UBERON:0001949!8.90e-22!3;UBERON:0005911!2.44e-19!82;UBERON:0002185!1.12e-16!4;UBERON:0004119!1.52e-11!169;UBERON:0000925!1.52e-11!169;UBERON:0006595!1.52e-11!169;UBERON:0004807!1.20e-08!28;UBERON:0000997!1.59e-08!1;UBERON:0005056!1.59e-08!1;UBERON:0001828!1.65e-08!8;UBERON:0000998!1.84e-08!1;UBERON:0006868!1.84e-08!1;UBERON:0004911!2.13e-08!1;UBERON:0007196!2.90e-08!14;UBERON:0001558!2.90e-08!14;UBERON:0002146!3.06e-08!1;UBERON:0005623!3.06e-08!1;UBERON:0004645!4.07e-08!1;UBERON:0001256!4.07e-08!1;UBERON:0001259!4.07e-08!1;UBERON:0000485!1.08e-07!9;UBERON:0003929!1.84e-07!54;UBERON:0006554!3.81e-07!44;UBERON:0001008!5.72e-07!45 | |ontology_enrichment_uberon=UBERON:0000365!8.22e-36!5;UBERON:0005910!7.69e-30!6;UBERON:0004815!5.01e-22!3;UBERON:0002031!5.01e-22!3;UBERON:0001949!8.90e-22!3;UBERON:0005911!2.44e-19!82;UBERON:0002185!1.12e-16!4;UBERON:0004119!1.52e-11!169;UBERON:0000925!1.52e-11!169;UBERON:0006595!1.52e-11!169;UBERON:0004807!1.20e-08!28;UBERON:0000997!1.59e-08!1;UBERON:0005056!1.59e-08!1;UBERON:0001828!1.65e-08!8;UBERON:0000998!1.84e-08!1;UBERON:0006868!1.84e-08!1;UBERON:0004911!2.13e-08!1;UBERON:0007196!2.90e-08!14;UBERON:0001558!2.90e-08!14;UBERON:0002146!3.06e-08!1;UBERON:0005623!3.06e-08!1;UBERON:0004645!4.07e-08!1;UBERON:0001256!4.07e-08!1;UBERON:0001259!4.07e-08!1;UBERON:0000485!1.08e-07!9;UBERON:0003929!1.84e-07!54;UBERON:0006554!3.81e-07!44;UBERON:0001008!5.72e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.08e-19;19!UBERON:0006925;6.08e-19;19!UBERON:0000365;2.30e-18;5!UBERON:0005910;1.76e-15;6!UBERON:0002423;1.64e-14;25!UBERON:0002365;3.64e-12;31!UBERON:0002330;3.64e-12;31!UBERON:0002368;7.50e-10;33!UBERON:0000949;2.53e-08;43!UBERON:0000486;3.18e-08;12 | |ontology_enrichment_uberon_v019=UBERON:0002107;6.08e-19;19!UBERON:0006925;6.08e-19;19!UBERON:0000365;2.30e-18;5!UBERON:0005910;1.76e-15;6!UBERON:0002423;1.64e-14;25!UBERON:0002365;3.64e-12;31!UBERON:0002330;3.64e-12;31!UBERON:0002368;7.50e-10;33!UBERON:0000949;2.53e-08;43!UBERON:0000486;3.18e-08;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.37e-19,19;UBERON:0006925,6.37e-19,19;UBERON:0008836,6.37e-19,19;UBERON:0000365,2.11e-18,5;UBERON:0008835,2.08e-16,22;UBERON:0003894,2.08e-16,22;UBERON:0009854,1.02e-15,23;UBERON:0005910,1.63e-15,6;UBERON:0007499,1.70e-14,25;UBERON:0009497,1.70e-14,25;UBERON:0000015,1.70e-14,25;UBERON:0002423,1.70e-14,25;UBERON:0006235,1.70e-14,25;UBERON:0004161,1.70e-14,25;UBERON:0009856,5.90e-14,26;UBERON:0002365,8.97e-12,31;UBERON:0002330,8.97e-12,31;UBERON:0002368,1.79e-10,35;UBERON:0005911,1.22e-09,82;UBERON:0000949,3.17e-08,45;UBERON:0003929,6.62e-07,54;UBERON:0005172,6.62e-07,54;UBERON:0005173,6.62e-07,54 | |||
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|short_description=p@chr15:58576558..58576569,- | |short_description=p@chr15:58576558..58576569,- | ||
}} | }} |
Latest revision as of 02:55, 25 July 2015
Short description: | p@chr15:58576558..58576569, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:58576558..58576569, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.00e-22 | 4 |
urothelial cell | 1.00e-22 | 4 |
hepatocyte | 4.05e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 6.37e-19 | 19 |
digestive gland | 6.37e-19 | 19 |
liver bud | 6.37e-19 | 19 |
urothelium | 2.11e-18 | 5 |
hepatic diverticulum | 2.08e-16 | 22 |
liver primordium | 2.08e-16 | 22 |
digestive tract diverticulum | 1.02e-15 | 23 |
transitional epithelium | 1.63e-15 | 6 |
epithelial sac | 1.70e-14 | 25 |
epithelium of foregut-midgut junction | 1.70e-14 | 25 |
anatomical boundary | 1.70e-14 | 25 |
hepatobiliary system | 1.70e-14 | 25 |
foregut-midgut junction | 1.70e-14 | 25 |
septum transversum | 1.70e-14 | 25 |
sac | 5.90e-14 | 26 |
exocrine gland | 8.97e-12 | 31 |
exocrine system | 8.97e-12 | 31 |
endocrine gland | 1.79e-10 | 35 |
endo-epithelium | 1.22e-09 | 82 |
endocrine system | 3.17e-08 | 45 |
gut epithelium | 6.62e-07 | 54 |
abdomen element | 6.62e-07 | 54 |
abdominal segment element | 6.62e-07 | 54 |