FFCP PHASE1:Hg19::chr15:68650846..68650865,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:68650846..68650865,- | |||
|coexpression_cluster_id=C259 | |||
|description=CAGE_peak_at_chr15:68650846..68650865,- | |description=CAGE_peak_at_chr15:68650846..68650865,- | ||
|id=chr15:68650846..68650865,- | |id=chr15:68650846..68650865,- | ||
|ontology_enrichment_celltype=CL:0000055!1.26e-22!180;CL:0000057!8.36e-22!75;CL:0002620!6.02e-11!23;CL:0000048!9.16e-10!430;CL:0002334!1.95e-09!12;CL:0000723!3.18e-09!436;CL:0000034!7.11e-09!444;CL:0002320!1.04e-08!365;CL:0000219!1.45e-08!390;CL:0000134!4.10e-08!358;CL:0000136!1.22e-07!15 | |ontology_enrichment_celltype=CL:0000055!1.26e-22!180;CL:0000057!8.36e-22!75;CL:0002620!6.02e-11!23;CL:0000048!9.16e-10!430;CL:0002334!1.95e-09!12;CL:0000723!3.18e-09!436;CL:0000034!7.11e-09!444;CL:0002320!1.04e-08!365;CL:0000219!1.45e-08!390;CL:0000134!4.10e-08!358;CL:0000136!1.22e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.63e-12;23!CL:0002334;1.38e-11;12!CL:0002579;6.64e-10;3!CL:0002580;8.13e-10;3!CL:0000135;1.22e-09;3!CL:0000388;1.22e-09;3!CL:0000057;2.04e-08;73!CL:0000136;7.35e-08;13!CL:0000153;2.17e-07;9!CL:0000447;2.17e-07;9!CL:0002617;4.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.24e-23,76;CL:0002320,8.12e-13,361;CL:0000134,1.31e-12,354;CL:0002620,2.28e-12,23;CL:0000219,1.16e-11,386;CL:0002334,1.25e-11,12;CL:0000136,3.18e-11,15;CL:0000048,1.34e-10,427;CL:0000723,2.97e-10,433;CL:0002579,5.62e-10,3;CL:0000034,8.30e-10,441;CL:0002580,8.44e-10,3;CL:0000135,1.46e-09,3;CL:0000388,1.46e-09,3;CL:0000153,1.48e-07,9;CL:0000447,1.48e-07,9;CL:0002617,4.05e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.02e-07!5;DOID:450!3.02e-07!5;DOID:66!3.02e-07!5;DOID:423!3.02e-07!5;DOID:0080000!3.02e-07!5;DOID:11722!3.02e-07!5 | |ontology_enrichment_disease=DOID:17!3.02e-07!5;DOID:450!3.02e-07!5;DOID:66!3.02e-07!5;DOID:423!3.02e-07!5;DOID:0080000!3.02e-07!5;DOID:11722!3.02e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;1.51e-13;5!DOID:450;1.51e-13;5!DOID:66;1.51e-13;5!DOID:423;1.51e-13;5!DOID:0080000;1.51e-13;5!DOID:11722;1.51e-13;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.30e-13,5;DOID:450,1.30e-13,5;DOID:66,1.30e-13,5;DOID:423,1.30e-13,5;DOID:0080000,1.30e-13,5;DOID:11722,1.30e-13,5 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.12e-09!375;UBERON:0003688!4.12e-09!6;UBERON:0002358!4.12e-09!6;UBERON:0003684!4.12e-09!6;UBERON:0001178!4.12e-09!6;UBERON:0004457!3.86e-08!12;UBERON:0000042!3.86e-08!12;UBERON:0000948!4.13e-07!24;UBERON:0005498!4.13e-07!24;UBERON:0004140!4.13e-07!24;UBERON:0009881!4.13e-07!24;UBERON:0004141!4.13e-07!24;UBERON:0003084!4.13e-07!24;UBERON:0007005!4.13e-07!24;UBERON:0004139!4.13e-07!24;UBERON:0004291!4.13e-07!24;UBERON:0007100!8.71e-07!27 | |ontology_enrichment_uberon=UBERON:0002384!2.12e-09!375;UBERON:0003688!4.12e-09!6;UBERON:0002358!4.12e-09!6;UBERON:0003684!4.12e-09!6;UBERON:0001178!4.12e-09!6;UBERON:0004457!3.86e-08!12;UBERON:0000042!3.86e-08!12;UBERON:0000948!4.13e-07!24;UBERON:0005498!4.13e-07!24;UBERON:0004140!4.13e-07!24;UBERON:0009881!4.13e-07!24;UBERON:0004141!4.13e-07!24;UBERON:0003084!4.13e-07!24;UBERON:0007005!4.13e-07!24;UBERON:0004139!4.13e-07!24;UBERON:0004291!4.13e-07!24;UBERON:0007100!8.71e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.93e-15;9!UBERON:0000042;2.93e-15;9!UBERON:0003688;6.83e-13;6!UBERON:0002358;6.83e-13;6!UBERON:0003684;6.83e-13;6!UBERON:0001178;6.83e-13;6!UBERON:0007846;1.22e-09;3!UBERON:0000043;1.22e-09;3!UBERON:0007845;1.22e-09;3!UBERON:0000310;2.30e-07;10!UBERON:0005406;3.48e-07;2!UBERON:0002097;4.28e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.13e-13,6;UBERON:0002358,6.13e-13,6;UBERON:0003684,6.13e-13,6;UBERON:0001178,6.13e-13,6;UBERON:0002384,6.67e-13,371;UBERON:0004457,2.47e-11,12;UBERON:0000042,2.47e-11,12;UBERON:0007846,1.46e-09,3;UBERON:0000043,1.46e-09,3;UBERON:0007845,1.46e-09,3;UBERON:0002199,1.21e-08,46;UBERON:0002416,1.21e-08,46;UBERON:0002097,1.46e-08,41;UBERON:0000310,2.22e-07,10;UBERON:0005406,3.30e-07,2 | |||
|phase1_expression=2.72517568905835,11.5614282901131,0.986680828671798,15.0109947529696,6.25745532198203,5.23403114460221,2.53299878168311,0,0,0,0,0,0,0,0,2.01697543935533,0.602694528023977,0,0,0,0.204000691244253,1.56727360739044,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,2.00535164254356,1.73815822752988,0,4.37971383272372,0,0,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95760732373446,0.25326102332916,0.264818361626438,2.58152958673932,1.77334191099179,1.68203280042692,1.06748995729705,5.42668606517752,0,0.269421344139376,0.326923806226917,0.302714855289863,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0,0,0,1.7308685049499,0,0,0,0,0,0.438977620880838,3.0648779579902,1.05166641234618,0.226864366320042,1.07633781413317,3.84403299873421,2.7551147150743,1.50045548042201,1.75189299705346,2.57640540045629,2.41951913231067,0.506328996723799,3.21542117031955,0.504867548488229,1.10459878370759,0.646584227275248,6.39017266529906,1.91428986632517,0.508681776931463,0,0,0,0,0,0,0.10366105501537,0,0,0,5.14592750554308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.1466765716419,1.03417372606222,0,0,1.06375246633948,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,1.4377491329495,1.14861935834114,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,1.66376689224646,1.96271887676878,1.10391690523754,0.468565659970853,0.601892199455438,4.5481500811197,0,0,1.84369168541703,0.0868836144680828,0.783204629850962,1.37257369524342,0,0,0,0,0,0,2.23297027036899,4.60385919864187,17.9622460437167,2.94720043288112,9.72243773226737,9.49038134747284,5.93672265779964,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.459257792658427,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.290012154876366,0,0,0,0,0.145016693914229,0,0.712256285173899,0,0,0,0,0,2.20368642781448,0,0,0,0,0,0.429374660225974,0.372158369359667,0.632758849437452,0.38126038784765,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0.848432591722276,1.13008116620243,0,0,1.31535265576129,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0,1.89996871767898,1.64647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,1.59398390600856,0,0,0.306806047506464,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,1.93701494939902,0,0,0,0,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0.203996435272644,0.288950589901519,0,0,0,0.859530882839914,0,0.279282401272254,0.458320848023367,0,0,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0,0,0.542999601753713,0.864221491201268,0,1.19730191562487,0,0.170388021785422,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.470531639396343,0,0,0,0.934853239388898,0,1.13641803165053,1.50940741051545,1.77962244319307,0.686520205190771,0.453692771289717,0.15543720058278,0.147855149989634,0,0.449803112163605,0.155262956876259,0,3.45594228925393,0,1.05180326298053,0,0.406870733204662,0.727394636810238,0.429642228169954,0,0.398095888698616,1.20008329398946,1.37358282073117,1.34699795506368,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,1.63804924423206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.352675943690684,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,2.288292572803,0,0,0.150420656698515,0.20170506870352,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.857440047187092,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.849635573439084,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,3.34795516350076,5.0839319149456,2.16313281061895,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.33639558774184,0,0,0.435433495793923,0,0,0.0717222053926763,0,0,0,0,0,0,0.611207220914332,0,0,0.402547587182052,0 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| ||
|short_description=p@chr15:68650846..68650865,- | |short_description=p@chr15:68650846..68650865,- | ||
}} | }} |
Latest revision as of 03:42, 25 July 2015
Short description: | p@chr15:68650846..68650865, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:68650846..68650865, - |
Coexpression cluster: | C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.24e-23 | 76 |
connective tissue cell | 8.12e-13 | 361 |
mesenchymal cell | 1.31e-12 | 354 |
skin fibroblast | 2.28e-12 | 23 |
motile cell | 1.16e-11 | 386 |
preadipocyte | 1.25e-11 | 12 |
fat cell | 3.18e-11 | 15 |
multi fate stem cell | 1.34e-10 | 427 |
somatic stem cell | 2.97e-10 | 433 |
omentum preadipocyte | 5.62e-10 | 3 |
stem cell | 8.30e-10 | 441 |
preadipocyte of the breast | 8.44e-10 | 3 |
fibrocyte | 1.46e-09 | 3 |
tendon cell | 1.46e-09 | 3 |
GAG secreting cell | 1.48e-07 | 9 |
carbohydrate secreting cell | 1.48e-07 | 9 |
adipocyte of breast | 4.05e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.13e-13 | 6 |
peritoneum | 6.13e-13 | 6 |
abdominal cavity | 6.13e-13 | 6 |
visceral peritoneum | 6.13e-13 | 6 |
connective tissue | 6.67e-13 | 371 |
cavity lining | 2.47e-11 | 12 |
serous membrane | 2.47e-11 | 12 |
dense regular connective tissue | 1.46e-09 | 3 |
tendon | 1.46e-09 | 3 |
regular connective tissue | 1.46e-09 | 3 |
integument | 1.21e-08 | 46 |
integumental system | 1.21e-08 | 46 |
skin of body | 1.46e-08 | 41 |
breast | 2.22e-07 | 10 |
perirenal fat | 3.30e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.30e-13 | 5 |
myotonic disease | 1.30e-13 | 5 |
muscle tissue disease | 1.30e-13 | 5 |
myopathy | 1.30e-13 | 5 |
muscular disease | 1.30e-13 | 5 |
myotonic dystrophy | 1.30e-13 | 5 |